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Tan0005700 (gene) of Snake gourd v1 genome

Gene IDTan0005700
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlyceraldehyde-3-phosphate dehydrogenase, cytosolic
Genome locationLG06:46277967..46278648
RNA-Seq ExpressionTan0005700
SyntenyTan0005700
Gene Ontology termsGO:0000166 - nucleotide binding (molecular function)
GO:0016620 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor (molecular function)
InterPro domainsIPR020831 - Glyceraldehyde/Erythrose phosphate dehydrogenase family
IPR036291 - NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9454230.1 hypothetical protein C3L33_13904, partial [Rhododendron williamsianum]1.2e-1059.02Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKV
        W    ++   S+  LF   ++T+  H NPEEIPWGE GAE+VVESTGVFTDKD  AAHLKV
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKV

KAG5521923.1 hypothetical protein RHGRI_034219 [Rhododendron griersonianum]2.6e-1058.33Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        W    ++   S+  LF   ++T+  H NPEEIPWGE GAE+VVESTGVFTDKD  AAHLK
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

KAG5521924.1 hypothetical protein RHGRI_034219 [Rhododendron griersonianum]2.6e-1058.33Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        W    ++   S+  LF   ++T+  H NPEEIPWGE GAE+VVESTGVFTDKD  AAHLK
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

MBA0579725.1 hypothetical protein [Gossypium raimondii]7.0e-1161.29Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC
        W    ++   S+  LF    +T+    NPEEIPWGEAGAEYVVESTGVFTDKD  AAHLKVC
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC

MBA0705070.1 hypothetical protein [Gossypium laxum]7.0e-1161.29Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC
        W    ++   S+  LF    +T+    NPEEIPWGEAGAEYVVESTGVFTDKD  AAHLKVC
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC

TrEMBL top hitse value%identityAlignment
A0A6A2XUL5 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic2.2e-1058.06Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC
        W    ++   S+  LF    +T+    NPEEIPWGE GA+YVVESTGVFTDKD  AAHLKVC
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC

A0A6A4L7F9 Gp_dh_N domain-containing protein (Fragment)5.8e-1159.02Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKV
        W    ++   S+  LF   ++T+  H NPEEIPWGE GAE+VVESTGVFTDKD  AAHLKV
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKV

A0A7J8NRV7 Gp_dh_N domain-containing protein (Fragment)3.4e-1161.29Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC
        W    ++   S+  LF    +T+    NPEEIPWGEAGAEYVVESTGVFTDKD  AAHLKVC
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC

A0A7J8Z0F5 Gp_dh_N domain-containing protein3.4e-1161.29Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC
        W    ++   S+  LF    +T+    NPEEIPWGEAGAEYVVESTGVFTDKD  AAHLKVC
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC

A0A7J9AR65 Gp_dh_N domain-containing protein (Fragment)1.7e-1059.68Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC
        W    ++   S+  LF    +T+    NPEEIPW EAGAEYVVESTGVFTDKD  AAHLKVC
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC

SwissProt top hitse value%identityAlignment
P08735 Glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic3.8e-1261.67Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        W  + I    S+  LF    +T+    NPEEIPWGEAGAEYVVESTGVFTDKD  AAHLK
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

P26517 Glyceraldehyde-3-phosphate dehydrogenase 1, cytosolic8.6e-1258.33Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        W  + I+    +  LF    +T+    NPEEIPWGEAGA+YVVESTGVFTDKD  AAHLK
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

P26519 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic8.6e-1260Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        W    ++   S+  LF    LT+    NPEE PWGEAGAEYVVESTGVFTDKD  AAHLK
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

P26520 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic6.6e-1258.33Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        W    ++A   +  LF    +T+    NPEEIPWGEAGA+YVVESTGVFTDKD  AAHLK
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

Q09054 Glyceraldehyde-3-phosphate dehydrogenase 2, cytosolic2.9e-1261.67Show/hide
Query:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        W  + I    S+  LF    +T+    NPEEIPWGEAGAEYVVESTGVFTDKD  AAHLK
Subjt:  WLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

Arabidopsis top hitse value%identityAlignment
AT1G13440.1 glyceraldehyde-3-phosphate dehydrogenase C21.1e-1184.85Show/hide
Query:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        NPE+IPWGEAGA++VVESTGVFTDKD  AAHLK
Subjt:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

AT1G13440.2 glyceraldehyde-3-phosphate dehydrogenase C21.1e-1184.85Show/hide
Query:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        NPE+IPWGEAGA++VVESTGVFTDKD  AAHLK
Subjt:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

AT1G16300.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 22.5e-0660.61Show/hide
Query:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        +P EIPW + GAEYVVES+GVFT     ++HLK
Subjt:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

AT1G79530.1 glyceraldehyde-3-phosphate dehydrogenase of plastid 11.5e-0660.61Show/hide
Query:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        +P EIPW + GA+YVVES+GVFT     A+HLK
Subjt:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK

AT3G04120.1 glyceraldehyde-3-phosphate dehydrogenase C subunit 12.0e-1184.85Show/hide
Query:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK
        NPE+IPW EAGA+YVVESTGVFTDKD  AAHLK
Subjt:  NPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTGCCATCGACGTCTTGGTTGGCCGCGGCGATAAGAGCGAACAAATCTGAGCACCCATTGTTTGTTCTCTCGATTCTTACGATAGATCTCCATGTGAACCCAGA
GGAGATCCCATGGGGAGAGGCTGGAGCTGAATATGTTGTTGAATCCACCGGAGTTTTCACTGACAAAGACAATGTTGCTGCTCATTTGAAGGTTTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTGCCATCGACGTCTTGGTTGGCCGCGGCGATAAGAGCGAACAAATCTGAGCACCCATTGTTTGTTCTCTCGATTCTTACGATAGATCTCCATGTGAACCCAGA
GGAGATCCCATGGGGAGAGGCTGGAGCTGAATATGTTGTTGAATCCACCGGAGTTTTCACTGACAAAGACAATGTTGCTGCTCATTTGAAGGTTTGTTGA
Protein sequenceShow/hide protein sequence
MTVPSTSWLAAAIRANKSEHPLFVLSILTIDLHVNPEEIPWGEAGAEYVVESTGVFTDKDNVAAHLKVC