; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005784 (gene) of Snake gourd v1 genome

Gene IDTan0005784
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionF-box protein SKIP19-like
Genome locationLG03:80423223..80425802
RNA-Seq ExpressionTan0005784
SyntenyTan0005784
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581459.1 F-box protein SKIP19, partial [Cucurbita argyrosperma subsp. sororia]6.5e-10166.35Show/hide
Query:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG
        MESN  PNS  E ARNWLELP DV S ILLK+G +DIL+N Q+VCSSWRKIC+DPL+WRVVDM    + +D DYDLE MC QAVDRSCGQL+ INIE+FG
Subjt:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG

Query:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ
        TDDLL +I+QSS +LR+LR+V    IS EG+ +AVSK PLLE LEIS  +F VETLET+G C PLLKSLKLN R+     ECD+ ALAIAENMPNLR+LQ
Subjt:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG
        I GN LT+RGL+AILDGCPDLESLDLR+CFNL+ AGQL  +C+E+I NLRLP DP DD E   EI  Y  DY ++     G S+TD    DDDYYE FSG
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG

Query:  GSVFS-YTDFHF
        GS FS YTD +F
Subjt:  GSVFS-YTDFHF

KAG7034751.1 Protein BREAST CANCER SUSCEPTIBILITY 1-like protein [Cucurbita argyrosperma subsp. argyrosperma]2.9e-10167.1Show/hide
Query:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG
        MESN  PNS  E ARNWLELP DV S ILLK+G +DIL+N Q+VCSSWRKIC+DPL+WRVVDM    + +D DYDLE MC QAVDRSCGQL+ INIE+FG
Subjt:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG

Query:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ
        TDDLL +I+QSS QLR+LR+V    IS EG+ +AVSK PLLE LEIS  +F VETLET+G C PLLKSLKLN R+     ECD+ ALAIAENMPNLR+LQ
Subjt:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG
        I GN LT+RGL+AILDGCPDLESLDLR+CFNL+ AGQL  +C+E+I NLRLP DP DD E   EI  Y  DY ++     G S+TD    DDDYYE FSG
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG

Query:  GSVFS-YTDF
        GS FS YTDF
Subjt:  GSVFS-YTDF

XP_022146630.1 F-box protein SKIP19-like [Momordica charantia]5.1e-10667.52Show/hide
Query:  MESNPNSEEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDD
        MESNP S + ARNWLELP D+ S ILLK+GAI+ILS+ Q+VCS WRKICKDPL+WRVVDMHN+   +D DYDLE MC+QAVDRSCG+L+DINI+YFGT++
Subjt:  MESNPNSEEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDD

Query:  LLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKL---NCRRGQIEFECDEEALAIAENMPNLRNLQ
        LL +I+QSS QLRRLR+V   +I+  G++EAVSK PLLEHLEIS C+F+ +TLETVG C  LLKSLKL   +CRRG I  +CD +A+AIAENMPNLR LQ
Subjt:  LLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKL---NCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGY-DSDYSDNDFTSIGFSNTDDF--DDDYYEFFS
        I G+ LTDRGLQAILDGCPDLESLDLR+CFNLD  GQL  ECAERI +LRLP DP DD E + E  G+ D D  D D+ S GFS+ D    DDDYYE +S
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGY-DSDYSDNDFTSIGFSNTDDF--DDDYYEFFS

Query:  GGSVFS-YTDFHFD
        GGS FS Y DF+FD
Subjt:  GGSVFS-YTDFHFD

XP_022925897.1 F-box protein SKIP19-like isoform X1 [Cucurbita moschata]2.5e-10066.35Show/hide
Query:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG
        MESN  PNS  E ARNWLELP DV S ILLK+G +DIL+N Q+VCSSWRKIC+DPL+WRVVDM    + +D DYDLE MC QAVDRSCGQL+ I IE+FG
Subjt:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG

Query:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ
        TDDLL +I+QSS QLR LR+V    IS EG+ +AVSK PLLE LEIS  +F VETLET+G C PLLKSLKLN R+     ECD+ ALAIAENMPNLR+LQ
Subjt:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG
        I GN LT+RGL+AILDGCPDLESLDLR+CFNL+ AGQL  +C+E+I NLRLP DP DD E   EI  Y  DY ++     G S+TD    DDDYYE FSG
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG

Query:  GSVFS-YTDFHF
        GS FS YTD +F
Subjt:  GSVFS-YTDFHF

XP_023543623.1 F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]1.7e-10166.67Show/hide
Query:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG
        MESN  PNS  E ARNWLELP DV S ILLK+G +DIL+N Q+VCSSWRKIC+DPL+WRVVDM    + +D DYDLE MC QAVDRSCGQL+ INIE+FG
Subjt:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG

Query:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ
        TDDLL +I+QSS QLR+LR+V    IS EG+ +AVSK PLLE LEIS  +F VETLET+G C PLLKSLKLN R+     ECD+ ALAIAENMPNLR+LQ
Subjt:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG
        I GN LT+RGL+AILDGCPDLESLDLR+CFNL+ AGQL  +C+E+I NLRLP DP DD E   EI  Y  DY ++     G S+TD    DDDYYE FSG
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG

Query:  GSVFS-YTDFHF
        GS FS YTD +F
Subjt:  GSVFS-YTDFHF

TrEMBL top hitse value%identityAlignment
A0A6J1CXS5 F-box protein SKIP19-like2.5e-10667.52Show/hide
Query:  MESNPNSEEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDD
        MESNP S + ARNWLELP D+ S ILLK+GAI+ILS+ Q+VCS WRKICKDPL+WRVVDMHN+   +D DYDLE MC+QAVDRSCG+L+DINI+YFGT++
Subjt:  MESNPNSEEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDD

Query:  LLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKL---NCRRGQIEFECDEEALAIAENMPNLRNLQ
        LL +I+QSS QLRRLR+V   +I+  G++EAVSK PLLEHLEIS C+F+ +TLETVG C  LLKSLKL   +CRRG I  +CD +A+AIAENMPNLR LQ
Subjt:  LLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKL---NCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGY-DSDYSDNDFTSIGFSNTDDF--DDDYYEFFS
        I G+ LTDRGLQAILDGCPDLESLDLR+CFNLD  GQL  ECAERI +LRLP DP DD E + E  G+ D D  D D+ S GFS+ D    DDDYYE +S
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGY-DSDYSDNDFTSIGFSNTDDF--DDDYYEFFS

Query:  GGSVFS-YTDFHFD
        GGS FS Y DF+FD
Subjt:  GGSVFS-YTDFHFD

A0A6J1ECV6 F-box protein SKIP19-like isoform X11.2e-10066.35Show/hide
Query:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG
        MESN  PNS  E ARNWLELP DV S ILLK+G +DIL+N Q+VCSSWRKIC+DPL+WRVVDM    + +D DYDLE MC QAVDRSCGQL+ I IE+FG
Subjt:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG

Query:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ
        TDDLL +I+QSS QLR LR+V    IS EG+ +AVSK PLLE LEIS  +F VETLET+G C PLLKSLKLN R+     ECD+ ALAIAENMPNLR+LQ
Subjt:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG
        I GN LT+RGL+AILDGCPDLESLDLR+CFNL+ AGQL  +C+E+I NLRLP DP DD E   EI  Y  DY ++     G S+TD    DDDYYE FSG
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG

Query:  GSVFS-YTDFHF
        GS FS YTD +F
Subjt:  GSVFS-YTDFHF

A0A6J1EGI8 F-box protein SKIP19-like isoform X21.0e-9966.56Show/hide
Query:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG
        MESN  PNS  E ARNWLELP DV S ILLK+G +DIL+N Q+VCSSWRKIC+DPL+WRVVDM    + +D DYDLE MC QAVDRSCGQL+ I IE+FG
Subjt:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG

Query:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ
        TDDLL +I+QSS QLR LR+V    IS EG+ +AVSK PLLE LEIS  +F VETLET+G C PLLKSLKLN R+     ECD+ ALAIAENMPNLR+LQ
Subjt:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG
        I GN LT+RGL+AILDGCPDLESLDLR+CFNL+ AGQL  +C+E+I NLRLP DP DD E   EI  Y  DY ++     G S+TD    DDDYYE FSG
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG

Query:  GSVFS
        GS FS
Subjt:  GSVFS

A0A6J1ILH5 F-box protein SKIP19-like2.0e-10066.89Show/hide
Query:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG
        MESN  PNS  E ARNWLELP DV S ILLK+G +DIL+N Q+VCSSWRKIC+DPL+WRVVDM    + +D DYDLE MC QAVDRSCGQL+ INIE+FG
Subjt:  MESN--PNS-EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFG

Query:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ
        TDDLL +I+QSS QLR+LR+V    IS EG  +AVSK PLLE LEIS  +F VETLET+G C PLLKSLKLN R+     ECD+ ALAIAENMPNLR+LQ
Subjt:  TDDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQ

Query:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG
        I GN LT+RGL+AILDGCPDLESLDLR+CFNL+ AGQL  +C+E+I NLRLP DP DD E   EI  Y  DY ++     G S+TD    DDDYYE FSG
Subjt:  ICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTD--DFDDDYYEFFSG

Query:  GSVFS
        GS FS
Subjt:  GSVFS

A0A6J1KRP9 F-box protein SKIP19-like3.4e-9563.1Show/hide
Query:  MESNPNSEEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFD--TDYDLETMCMQAVDRSCGQLVDINIEYFGT
        MES P SE+PA NWL+LP+D+M+ ILLK+ A DIL NVQNVCSSWR+ICKDP LWRVVD+H +D+R    TD   E MCMQAV+ SCGQLVDINIE+FGT
Subjt:  MESNPNSEEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFD--TDYDLETMCMQAVDRSCGQLVDINIEYFGT

Query:  DDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQI
        DDLL HISQSS++LRRLR+VC  +IS +GIT+A  K P L+HLEIS  A+ ++TL TVG C P LK+LKLN  R + EFE DEEALAIAENMPNLRNLQI
Subjt:  DDLLFHISQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQI

Query:  CGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTDDFDDD
         GN LT+ GLQAILDGCP LE LDLR C+++ FAGQ+   C+ +I + RLP + FD+S++++E F Y S  SD++F     S+TD FD +
Subjt:  CGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTDDFDDD

SwissProt top hitse value%identityAlignment
Q9M0U6 Putative F-box/LRR-repeat protein 228.7e-5643.49Show/hide
Query:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEY--FGTDDLLFHI
        EE   NW ELP D++S ILL++  ++IL N + VC SWR++ KDPL+WR +DM NL  R    Y +E  C   VD S G L++ NI+   F T  LL ++
Subjt:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEY--FGTDDLLFHI

Query:  SQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTD
        ++ S  LRRLRV     I+  GI EA+ K PLLE LE+  C+   E  +T+G   P LK+LKL      +  E D +ALAIA+ MP L +LQ+  N LT+
Subjt:  SQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTD

Query:  RGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSD------------NDFTSIGFSNTDDF
         GL AILDGCP LE LDLR+CFN++  G L R+C ERI + R P D  DD   +  IF  +    D            +D T  G+  + DF
Subjt:  RGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSD------------NDFTSIGFSNTDDF

Q9M0U7 Putative F-box protein At4g054759.0e-5341.54Show/hide
Query:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQ
        +E   NW++LP ++ + ILL++   DIL N + +C +WR+ICKDP +WR +   NL +    ++D E+MC   VD S G L++INIE+F +D LL +I  
Subjt:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQ

Query:  SSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIE-----------FECDEEALAIAENMPNLRNL
         S  L+ L +     ++ +G+   + K PLLE L I   +  ++ L+ +G   P LK+LKLN    ++             ECD++ALAIAE+MP LR+L
Subjt:  SSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIE-----------FECDEEALAIAENMPNLRNL

Query:  QICGNPLTDRGLQAILDGCPDLES-LDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDD
        Q+ GN LT+ GL AILDGCP LE  LD+R+CFN++  G L + C +RI  LR P D   D
Subjt:  QICGNPLTDRGLQAILDGCPDLES-LDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDD

Q9M0U9 F-box protein SKIP191.9e-7150.85Show/hide
Query:  NWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQSSEQL
        NW ELP ++ S IL ++GAI+IL N Q VC SWR++CKDP +WR +DMHNL +  D DY+LE MC  AVDRS G LVDI I YFGT DLL +I+  S  L
Subjt:  NWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQSSEQL

Query:  RRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRGLQAIL
        R LR++    I+ +G  EAV K P LE LE+S C+FSVE+L  VG C   +K+LKLN      + E D++ALAIAE MP LR+LQ+CGN L+D GL AIL
Subjt:  RRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRGLQAIL

Query:  DGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTDDFDDDYYEFFSGGSVFS-YTDFHF
        D C +LE LDLRRCFN++  G L++ C E +  +R P D   D +      G   D    DF+ I   + DD  + YY+ FSG S FS Y  F F
Subjt:  DGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTDDFDDDYYEFFSGGSVFS-YTDFHF

Q9S9V8 Putative F-box/LRR-repeat protein 93.8e-5145.61Show/hide
Query:  RNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDM---HNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQS
        RNW ELP ++ S ILL++GAI+IL N Q VC SWR++C+DP +WR +D+    NL N  +  Y +E +C +AVD S G L++INI+Y      L +I+  
Subjt:  RNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDM---HNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQS

Query:  SEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEIS-DCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRG
        S  LRRL VV    +   G+ EA  K PLLE L+I+   +   + L+ VG   P L++LKLNC  G ++  CD+ ALAIAE MP LR+LQ+  N L++ G
Subjt:  SEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEIS-DCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRG

Query:  LQAILDGCPDLESLDLRRCFNLDFAGQL
        L AIL+GCP L++L L +C N++  G +
Subjt:  LQAILDGCPDLESLDLRRCFNLDFAGQL

Q9S9V9 Putative F-box/LRR-repeat protein 237.3e-7149.08Show/hide
Query:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQ
        ++  RNW ELP  + S ILL++GAI+IL N Q VC  W ++CKDP +WR +D+ N ++R    YDLE+MC  AVDRS G L++I I Y+GT+DL+ +I+ 
Subjt:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQ

Query:  SSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFE---CDEEALAIAENMPNLRNLQICGNPLT
         S  L+ L +V  F I+ EG+ +AVSK PLLE+LE+S C FS E+L  +G   P LK+LKLN R  +I F     D+ A AIAE+MP LR+LQ+ GN LT
Subjt:  SSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFE---CDEEALAIAENMPNLRNLQICGNPLT

Query:  DRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAE---IFGYDSDYSDNDF
        ++GL AILDGCP LE LDLR+CFN++  G L++ C ERI +LR P D  DDS+  ++   +  + S +++ D+
Subjt:  DRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAE---IFGYDSDYSDNDF

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein1.4e-7250.85Show/hide
Query:  NWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQSSEQL
        NW ELP ++ S IL ++GAI+IL N Q VC SWR++CKDP +WR +DMHNL +  D DY+LE MC  AVDRS G LVDI I YFGT DLL +I+  S  L
Subjt:  NWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQSSEQL

Query:  RRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRGLQAIL
        R LR++    I+ +G  EAV K P LE LE+S C+FSVE+L  VG C   +K+LKLN      + E D++ALAIAE MP LR+LQ+CGN L+D GL AIL
Subjt:  RRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRGLQAIL

Query:  DGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTDDFDDDYYEFFSGGSVFS-YTDFHF
        D C +LE LDLRRCFN++  G L++ C E +  +R P D   D +      G   D    DF+ I   + DD  + YY+ FSG S FS Y  F F
Subjt:  DGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTDDFDDDYYEFFSGGSVFS-YTDFHF

AT4G05470.1 RNI-like superfamily protein7.3e-5040.84Show/hide
Query:  RNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINI-EYFGTDDLLFHISQSSE
        RNW++LP ++ + ILL++   DIL N Q VC  WR+ICKDP +WR +   N  +    ++D  +MC   VD S G L++IN+ E+F +D LL +I  +  
Subjt:  RNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINI-EYFGTDDLLFHISQSSE

Query:  QLRRLRV-VCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQI----------------EFECDEEALAIAENMPNL
         LR L + +C   ++  G+  A++K PLLE LE++     ++ L+ +G   P LK+LKLN   G++                  ECD++ALAIAE+MP L
Subjt:  QLRRLRV-VCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQI----------------EFECDEEALAIAENMPNL

Query:  RNLQICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDD
         +LQ+  N LT+ GL AILDGCP LE LD+R+CF +   G L + C E I  LR P D   D
Subjt:  RNLQICGNPLTDRGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDD

AT4G05475.1 RNI-like superfamily protein6.4e-5441.54Show/hide
Query:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQ
        +E   NW++LP ++ + ILL++   DIL N + +C +WR+ICKDP +WR +   NL +    ++D E+MC   VD S G L++INIE+F +D LL +I  
Subjt:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQ

Query:  SSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIE-----------FECDEEALAIAENMPNLRNL
         S  L+ L +     ++ +G+   + K PLLE L I   +  ++ L+ +G   P LK+LKLN    ++             ECD++ALAIAE+MP LR+L
Subjt:  SSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIE-----------FECDEEALAIAENMPNLRNL

Query:  QICGNPLTDRGLQAILDGCPDLES-LDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDD
        Q+ GN LT+ GL AILDGCP LE  LD+R+CFN++  G L + C +RI  LR P D   D
Subjt:  QICGNPLTDRGLQAILDGCPDLES-LDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDD

AT4G05490.1 RNI-like superfamily protein6.2e-5743.49Show/hide
Query:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEY--FGTDDLLFHI
        EE   NW ELP D++S ILL++  ++IL N + VC SWR++ KDPL+WR +DM NL  R    Y +E  C   VD S G L++ NI+   F T  LL ++
Subjt:  EEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEY--FGTDDLLFHI

Query:  SQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTD
        ++ S  LRRLRV     I+  GI EA+ K PLLE LE+  C+   E  +T+G   P LK+LKL      +  E D +ALAIA+ MP L +LQ+  N LT+
Subjt:  SQSSEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTD

Query:  RGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSD------------NDFTSIGFSNTDDF
         GL AILDGCP LE LDLR+CFN++  G L R+C ERI + R P D  DD   +  IF  +    D            +D T  G+  + DF
Subjt:  RGLQAILDGCPDLESLDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSD------------NDFTSIGFSNTDDF

AT4G05497.1 RNI-like superfamily protein2.7e-5245.61Show/hide
Query:  RNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDM---HNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQS
        RNW ELP ++ S ILL++GAI+IL N Q VC SWR++C+DP +WR +D+    NL N  +  Y +E +C +AVD S G L++INI+Y      L +I+  
Subjt:  RNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDM---HNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQS

Query:  SEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEIS-DCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRG
        S  LRRL VV    +   G+ EA  K PLLE L+I+   +   + L+ VG   P L++LKLNC  G ++  CD+ ALAIAE MP LR+LQ+  N L++ G
Subjt:  SEQLRRLRVVCSFNISGEGITEAVSKCPLLEHLEIS-DCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRG

Query:  LQAILDGCPDLESLDLRRCFNLDFAGQL
        L AIL+GCP L++L L +C N++  G +
Subjt:  LQAILDGCPDLESLDLRRCFNLDFAGQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGAACCCTAACTCGGAAGAGCCAGCGAGGAACTGGCTTGAACTCCCTGAAGACGTCATGTCCAGGATTCTGCTCAAGGTAGGCGCCATTGATATCCTTTCCAA
CGTGCAAAACGTCTGCTCTTCCTGGCGTAAGATCTGCAAGGACCCTCTCTTGTGGCGGGTCGTCGATATGCATAATTTGGATAATCGGTTCGACACGGACTACGATTTGG
AGACGATGTGCATGCAGGCTGTTGACCGTAGTTGCGGTCAATTGGTTGATATCAATATTGAGTACTTCGGCACCGATGACTTGCTCTTCCATATCTCTCAGAGCTCAGAA
CAACTTAGAAGACTCCGGGTTGTATGTTCCTTTAACATCTCAGGTGAGGGAATCACTGAAGCAGTTTCGAAATGTCCATTGTTGGAACATCTTGAAATTTCTGACTGTGC
ATTTTCTGTGGAAACTTTGGAAACTGTTGGATGGTGTTCTCCTCTCCTGAAATCTCTGAAACTTAATTGCAGAAGAGGACAGATTGAATTTGAATGTGATGAGGAAGCCC
TCGCTATTGCTGAAAACATGCCTAATTTACGTAACCTTCAGATATGTGGCAACCCTCTAACTGACAGGGGCTTGCAGGCCATTCTTGATGGTTGTCCTGACTTAGAATCT
CTTGATTTACGCCGGTGTTTCAATTTAGATTTTGCGGGACAGTTGCGAAGAGAATGTGCTGAAAGGATTAACAATTTGCGCTTGCCTCGTGATCCCTTTGATGACTCTGA
AACTCTGGCCGAAATTTTTGGTTATGATAGTGATTATTCTGATAACGATTTCACTAGTATTGGTTTCTCCAACACTGATGATTTTGATGATGACTACTATGAATTCTTCT
CAGGGGGGAGCGTCTTCTCTTATACAGATTTTCATTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
CAAACTTGTCGATGGATTTCATAATCATAGATTCATCAAAAGATTGTCCTTTTTTTATTCGGAAGCTAAAGATTATTATCTATTATTTAATCCGGATATTCGGCCTAAAG
ACTCGAAAACAAATTAGATTTAGAACACCAAAAAGCATCGGTATTTAATTTCCACTGGCCGGAGAAATCCAAATTATCCTCCAAACTTAACCCGATGCCCTCTCGTACCG
AACTGTTAATCAGGACTTGAATAAACCACGACGATAACCTTCGTAAACCAAACCCTAGTGGTTAGTCACTCCACGATCGCTCTCAAAATTTCACGATCTTCTTCCATGGA
GTCGAACCCTAACTCGGAAGAGCCAGCGAGGAACTGGCTTGAACTCCCTGAAGACGTCATGTCCAGGATTCTGCTCAAGGTAGGCGCCATTGATATCCTTTCCAACGTGC
AAAACGTCTGCTCTTCCTGGCGTAAGATCTGCAAGGACCCTCTCTTGTGGCGGGTCGTCGATATGCATAATTTGGATAATCGGTTCGACACGGACTACGATTTGGAGACG
ATGTGCATGCAGGCTGTTGACCGTAGTTGCGGTCAATTGGTTGATATCAATATTGAGTACTTCGGCACCGATGACTTGCTCTTCCATATCTCTCAGAGCTCAGAACAACT
TAGAAGACTCCGGGTTGTATGTTCCTTTAACATCTCAGGTGAGGGAATCACTGAAGCAGTTTCGAAATGTCCATTGTTGGAACATCTTGAAATTTCTGACTGTGCATTTT
CTGTGGAAACTTTGGAAACTGTTGGATGGTGTTCTCCTCTCCTGAAATCTCTGAAACTTAATTGCAGAAGAGGACAGATTGAATTTGAATGTGATGAGGAAGCCCTCGCT
ATTGCTGAAAACATGCCTAATTTACGTAACCTTCAGATATGTGGCAACCCTCTAACTGACAGGGGCTTGCAGGCCATTCTTGATGGTTGTCCTGACTTAGAATCTCTTGA
TTTACGCCGGTGTTTCAATTTAGATTTTGCGGGACAGTTGCGAAGAGAATGTGCTGAAAGGATTAACAATTTGCGCTTGCCTCGTGATCCCTTTGATGACTCTGAAACTC
TGGCCGAAATTTTTGGTTATGATAGTGATTATTCTGATAACGATTTCACTAGTATTGGTTTCTCCAACACTGATGATTTTGATGATGACTACTATGAATTCTTCTCAGGG
GGGAGCGTCTTCTCTTATACAGATTTTCATTTTGATTGACAGTTTAGAAGCATGGTGATAAAACCCTGGCCTTGTTTTTTCTTGCCGTCCCTTTCCCATTGTTGGAGGTG
CATAAACAAAGCAGAGGAGCCTTGCATCTACTGAACTGCTTCAGAATTCCTCATTTCGTCAGTCAGAGTAATGTACTGCCATTTTTTTCCTCTTCTGCATGCAACAAATA
AAGATCTAAATTAGCTTCTCGGTGTCTTCTTTTTGTCATGTTTATAAAGGAGTGAATTCTAGGAAGTCTGGGAAGCTTGCTGAAATTTTATCTGCTCAAGTGATATGATG
TAAAAGGTTCTAGTTCATGTGTCAAATATTCAGTATTTATTCATACTTGAACTTGATCATTTATGCTTTATCACTTAGTTCGTCGAATTTTTATTAATCTTGGGATGTAC
AGCGTTATTTAAGTTGCTTTATTTGTAAAGGAAGTATTTTTTTGGGAAGTGGATTTGGATATTCTCTACTTAGTACTCGTTTGATGGATATTGCACTAGGGATCTTACGG
ATGAGG
Protein sequenceShow/hide protein sequence
MESNPNSEEPARNWLELPEDVMSRILLKVGAIDILSNVQNVCSSWRKICKDPLLWRVVDMHNLDNRFDTDYDLETMCMQAVDRSCGQLVDINIEYFGTDDLLFHISQSSE
QLRRLRVVCSFNISGEGITEAVSKCPLLEHLEISDCAFSVETLETVGWCSPLLKSLKLNCRRGQIEFECDEEALAIAENMPNLRNLQICGNPLTDRGLQAILDGCPDLES
LDLRRCFNLDFAGQLRRECAERINNLRLPRDPFDDSETLAEIFGYDSDYSDNDFTSIGFSNTDDFDDDYYEFFSGGSVFSYTDFHFD