; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005790 (gene) of Snake gourd v1 genome

Gene IDTan0005790
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionTransmembrane protein 230
Genome locationLG09:46819810..46827673
RNA-Seq ExpressionTan0005790
SyntenyTan0005790
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005776 - autophagosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459349.1 PREDICTED: transmembrane protein 230 [Cucumis melo]7.3e-5391.38Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RY+SLA+DDND+D +GS++DPRFYYTPKAFDKI WKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

XP_022939930.1 transmembrane protein 230-like [Cucurbita moschata]3.3e-5392.24Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRY+SL+TDDNDLD DG+Q+DPRFYYTPKAFDKI WKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

XP_022961740.1 transmembrane protein 230-like [Cucurbita moschata]1.7e-5493.97Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRY+SLA DDNDLDY+GSQYDPRFYYTPKAFDKI WKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

XP_022990725.1 transmembrane protein 230-like [Cucurbita maxima]1.9e-5393.1Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR+VRY+SLA DDNDLDY+GSQYDPRFYYTPKAFDKI WKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GY FASIPDY
Subjt:  AWRGAKGYRFASIPDY

XP_023521905.1 transmembrane protein 230-like [Cucurbita pepo subsp. pepo]5.9e-5594.83Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRY+SLA DDNDLDY+GSQYDPRFYYTPKAFDKI WKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

TrEMBL top hitse value%identityAlignment
A0A1S3C9X7 Transmembrane protein 2303.5e-5391.38Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRN+RY+SLA+DDND+D +GS++DPRFYYTPKAFDKI WKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

A0A6J1FP54 Transmembrane protein 2301.6e-5392.24Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRY+SL+TDDNDLD DG+Q+DPRFYYTPKAFDKI WKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

A0A6J1HAY7 Transmembrane protein 2308.4e-5593.97Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRY+SLA DDNDLDY+GSQYDPRFYYTPKAFDKI WKSIALA+FLLLLGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

A0A6J1JQW3 Transmembrane protein 2309.2e-5493.1Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRR+VRY+SLA DDNDLDY+GSQYDPRFYYTPKAFDKI WKSIALA+FLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GY FASIPDY
Subjt:  AWRGAKGYRFASIPDY

A0A6J1K312 Transmembrane protein 2301.6e-5392.24Show/hide
Query:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
        MASRRNVRY+SL+TDDNDLD DG+Q+DPRFYYTPKAFDKI WKSIALAIFLL LGS LLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY
Subjt:  MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYY

Query:  AWRGAKGYRFASIPDY
        AWRGA GYRFASIPDY
Subjt:  AWRGAKGYRFASIPDY

SwissProt top hitse value%identityAlignment
Q5BJP5 Transmembrane protein 2304.9e-1239.29Show/hide
Query:  VRYTSL-ATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+Y+ L +TDD  +D    +  P          KI +K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYTSL-ATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  AKGYRFASIPDY
         +GY +  IPD+
Subjt:  AKGYRFASIPDY

Q5R8X3 Transmembrane protein 2304.9e-1239.64Show/hide
Query:  VRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA
        V+Y+ L++ D+         D +F  TP    KI +K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G 
Subjt:  VRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA

Query:  KGYRFASIPDY
        +GY +  IPD+
Subjt:  KGYRFASIPDY

Q5ZLH4 Transmembrane protein 2301.3e-1239.29Show/hide
Query:  VRYTSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+Y+ LA TDD  +D    +  P          KI +K+IALA+ L ++G+ L+ +   +L G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYTSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  AKGYRFASIPDY
         +GY +  IPD+
Subjt:  AKGYRFASIPDY

Q8CIB6 Transmembrane protein 2302.2e-1240.18Show/hide
Query:  VRYTSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG
        V+Y+ LA TDD  +D    +  P          KI +K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G
Subjt:  VRYTSLA-TDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRG

Query:  AKGYRFASIPDY
         +GY +  IPD+
Subjt:  AKGYRFASIPDY

Q96A57 Transmembrane protein 2302.9e-1239.64Show/hide
Query:  VRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA
        V+Y+ L++ D+         D +F  TP    KI +K+IALA  L L+G+ L+ +   +L+G+++ G   +A  +L +G L FLPGFY  RIAYYA +G 
Subjt:  VRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMA-GEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGA

Query:  KGYRFASIPDY
        +GY +  IPD+
Subjt:  KGYRFASIPDY

Arabidopsis top hitse value%identityAlignment
AT2G19350.1 Eukaryotic protein of unknown function (DUF872)1.1e-1144.44Show/hide
Query:  KSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGAKGYRFASIP
        K I+LA+ LL+ G+L + L +F+    + G++      + LG L F+PGFY TRIAYYA++G KG+ F++IP
Subjt:  KSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGAKGYRFASIP

AT3G29170.1 Eukaryotic protein of unknown function (DUF872)2.2e-3964.46Show/hide
Query:  MASRRNVRYTSLATDDNDLDY-----DGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET
        MASRR+VRY  L  D++D  Y     +   +DPRF Y+PKAFD++ WKSIALA+FLL LG LLL LS+F+  GHM G+ SQ Y LL LG LTFLPGFYET
Subjt:  MASRRNVRYTSLATDDNDLDY-----DGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYET

Query:  RIAYYAWRGAKGYRFASIPDY
        RIAYY+WRGA+GYRFA+IP Y
Subjt:  RIAYYAWRGAKGYRFASIPDY

AT4G29850.1 Eukaryotic protein of unknown function (DUF872)1.9e-1144.44Show/hide
Query:  KSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGAKGYRFASIP
        K IALA+ LL+ G+L +   +F+    + G++      + LG L F+PGFY TRIAYYA++G KG+ F++IP
Subjt:  KSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGAKGYRFASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCAAGACGGAATGTTCGTTACACCTCCCTTGCCACTGATGATAATGATCTTGATTATGATGGAAGTCAGTATGACCCTCGCTTTTACTATACACCAAAGGCTTT
TGACAAGATCCTGTGGAAATCCATCGCTCTTGCTATCTTCTTGTTACTCCTTGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACAGGTCACATGGCAGGAGAGA
AATCGCAAGCTTATGGTCTTTTGGCATTGGGGTTTCTTACCTTCCTCCCAGGCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCTAAGGGATATCGCTTC
GCTTCCATTCCCGATTACTAG
mRNA sequenceShow/hide mRNA sequence
ACCATACAAAAACCCCTCTTCCCCCTTTTAGCTGCACAAGAAGCTCAGCCGTTCGGCCTCCTTCTCCGGCGATTCTCCGGCGACAGCGACGACAAGCTCCCACCAGCGGC
GTGTTGAAGACCCACACGTGCGGCGACCGAGTACTTCGCCACCGGATCTACGTCGAACGGAGGCTTGACGCGCGATTCCAGTGATTGCAACAACCCACGACGCGCATCTT
CCTCCGGAAGCCGGCAGCCGTGACTGCTGCAGCGACCCACGCGATTCCCACGGCTACATGATCCTCCACGAAGCGCGACCTGCGGCTTCACGATGACGTTACTAGTTCAT
CCCTCACACGGCCTCGACGCGGGAGAACAGCAACCTGGACGAGCGGCAGCGGCTATAGAGTGTAGACGTAACCACGAACAACGCGTTTTTGACAGTTCCACGACTTTTGG
TGGTTACCCACAACCAGAATGGTCTCATATCTGAATACCACAGCCTGTAAAGTTCAGTTCAGATCTGCGCGTTCGAACTCATTTGAACACAATTCAGCAAGGACCTAAGC
CCTTTTCGGTGGCTTGATTTAGTTGAAGTTTGAAGACTGCATTCTTTATATTTGCTGCCATGGCATCAAGACGGAATGTTCGTTACACCTCCCTTGCCACTGATGATAAT
GATCTTGATTATGATGGAAGTCAGTATGACCCTCGCTTTTACTATACACCAAAGGCTTTTGACAAGATCCTGTGGAAATCCATCGCTCTTGCTATCTTCTTGTTACTCCT
TGGATCATTGCTTCTCTTTCTTTCGTACTTCGTATTAACAGGTCACATGGCAGGAGAGAAATCGCAAGCTTATGGTCTTTTGGCATTGGGGTTTCTTACCTTCCTCCCAG
GCTTTTATGAGACTAGGATTGCATATTATGCATGGAGGGGTGCTAAGGGATATCGCTTCGCTTCCATTCCCGATTACTAGGTGTCCCTATCTTGATTGTGAAATTAATGC
ACTAGTGACTTTACATGTAACGCCCGTGTAAAAAAAAGAGAAGCCCAGCCGCACGCTTCCCCCCCCCGCTCGATTCCTCTTCTTCCTCTTGCCGCAGCCGATAGCCTCCT
TCGGCGTCTCCTCCCTCGCGAAGTCATCCACCGCCGGCAACTCCGTTAGCCGCCGTCTTCTTCCTCTCTCGTCTCCTCGTCGCCGGCAGTCGAGGCCAACCACCCTTCCC
GCAAACCCGACGCTGATAGCAAGCATCACTCGTTGCTGTTTCTCTTTTCTTCTCCTCTCCGTGAAGTCGCCGACTGCTCTTCATCTTCTCCATTCTCTCCTTGTCGACAG
CAAGCCCAAATCTTACCGATCGGGCCACGGGCATCTCGGATCTATGCCCCACGTGCCGCCACTCGCCGGAAATTTTGTCGCCGCCGCCGCTTGCCGGATTCTGCCGTCGC
CGCCGCCGTTGGATAGGTATAACTGGTCGTCTTCATTTTCTCGATTCCATTTTAAATCTCCGTGCATTACTTTGGTCATTTAAGGCAAATTAGTTCGTGTATGATTGTTA
GAAGCGTGGTTTTAAGGTCTTTGTTTATTGAATAAGGGCTCGTGCGTGTTAAGGAAGCGCGTGGAACTTGGGATCGAACTCCCGAACCTTAGCTATCGAGGTAAGAAATC
CTGAGGCGGTTGATGACGACGACGACCCGACGAGGCTGTGGGACTCTGTTTCCTTCCTGTTTCCTTAGCTTAGAGTTCTCGCTTGTCACATTCATGTTTTAGTTTCTGTT
TTATTTGCTTGGTCGCTTGGCCCTATGTTTCTCTTGTACTTCTTAGTTAGTGAATTTTCATTCCGCTTGAAACTCTGGTTGTAGCCCAACCCGTTCTCTGATTGTAGTTT
GGTGGGGGTTGGGCATTTCTTGAGACTCTTTGAAGTGTTTTCTGCTTGTTAGGTTCTAGGAAAAATTTTGGTTTTCTCCTTGCTATGTTGTTATGCTGCCGAAATTTTGG
CACGAATGATGTGGCGGAGTAACTTCCCTACGTAGGTTCGTCTCGAATTTTAGGGTCGTTACATTACATCATTTCCTCCAACAATGCATTCATTTTTCCATTTTACTCAT
GAATGCTCTTCTTGAATGAATCTGTATTAATTGTTGTTGTTGTACCACCATCTAACCCATGACAAAAATTTTTCACTAGCATCCATCGAGAAACCCCATGATGAAGATGT
TTTCATAAAAGTTCCTTATATCCTTCTCATGCATCATATAATGACTCCCTCTTACTGAGCAAAATTGCTATTCTTCAGTTTGAATTTTTGTCGTCTTTGCTAGTGGAAAG
AATTTGGATAAAAACTTTTGAGCTAAATCATTTCAGGTGACAATGAATGTTGCTGGCAAGGAGTTATAATTGCTTAGCTTGAGCCTTAAGAGTAAAGGGAAAGAGCCTAA
GCGTGATACCATCAACAGTCACTCTATTATACTTGAATGTGTCACAAATTTCTAGAAAATTAGAGATGAGAATTGTGGTCTTCACTTTGTAACTCACTAAAGTTCATTGA
AGTTTGGATCATCAAGCATAATCGACTTGATCGCAAAATTATTAGCTTGAATTGTTGACCTTCGAATAGAATAATATATCTTAATTACATTTGGCAA
Protein sequenceShow/hide protein sequence
MASRRNVRYTSLATDDNDLDYDGSQYDPRFYYTPKAFDKILWKSIALAIFLLLLGSLLLFLSYFVLTGHMAGEKSQAYGLLALGFLTFLPGFYETRIAYYAWRGAKGYRF
ASIPDY