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Tan0005806 (gene) of Snake gourd v1 genome

Gene IDTan0005806
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein Ycf2-like
Genome locationLG01:38690141..38693493
RNA-Seq ExpressionTan0005806
SyntenyTan0005806
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]9.4e-2151Show/hide
Query:  NIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHAK
        +++ DH++M+DD E+F+ YPWG +AF+LLV +M +VV SKG  GI M      +LAWAY+VIPTLS PP  +  RI N VP+IIN   ++Q +W+DL  K
Subjt:  NIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHAK
KAA0051565.1 protein Ycf2-like [Cucumis melo var. makuwa]2.5e-2150.5Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA
        ++++ D+++M+DD E+F+ YPWG +AF+LLV +M + V SKG  GI +      +LAWAY+VIPTLS PP  +A RI N VP+IINW A+ Q +W+DL  
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA

Query:  K
        K
Subjt:  K
TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]1.0e-2251.96Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM-------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLH
        ++++ DH++M+DD E+F+ YPWG +AF+LLV +M + V SKG  GI M       +LAWAY+VIPTLS PP  +A RI N VP+IINW A++Q +W+DL 
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM-------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLH

Query:  AK
         K
Subjt:  AK
TYK21258.1 protein Ycf2-like [Cucumis melo var. makuwa]2.5e-2150.5Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA
        ++++ D+++M+DD E+F+ YPWG +AF+LLV +M + V SKG  GI +      +LAWAY+VIPTLS PP  +A RI N VP+IINW A+ Q +W+DL  
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA

Query:  K
        K
Subjt:  K
TYK23840.1 protein Ycf2-like [Cucumis melo var. makuwa]1.2e-2050.5Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIG------MLLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA
        ++++ DH++M+DD E+F+ YPWG +AF+LLV +M +VV SKG  GI       ++LAWAY+V PTLS P   +A RI N VP+IINW A++Q +W+DL  
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIG------MLLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA

Query:  K
        K
Subjt:  K
TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like4.5e-2151Show/hide
Query:  NIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHAK
        +++ DH++M+DD E+F+ YPWG +AF+LLV +M +VV SKG  GI M      +LAWAY+VIPTLS PP  +  RI N VP+IIN   ++Q +W+DL  K
Subjt:  NIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHAK
A0A5A7U6E1 Protein Ycf2-like5.9e-2150.5Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIG------MLLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA
        ++++ DH++M+DD E+F+ YPWG +AF+LLV +M +VV SKG  GI       ++LAWAY+V PTLS P   +A RI N VP+IINW A++Q +W+DL  
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIG------MLLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA

Query:  K
        K
Subjt:  K
A0A5A7UD30 Protein Ycf2-like1.2e-2150.5Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA
        ++++ D+++M+DD E+F+ YPWG +AF+LLV +M + V SKG  GI +      +LAWAY+VIPTLS PP  +A RI N VP+IINW A+ Q +W+DL  
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA

Query:  K
        K
Subjt:  K
A0A5D3CEX9 Protein Ycf2-like4.8e-2351.96Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM-------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLH
        ++++ DH++M+DD E+F+ YPWG +AF+LLV +M + V SKG  GI M       +LAWAY+VIPTLS PP  +A RI N VP+IINW A++Q +W+DL 
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM-------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLH

Query:  AK
         K
Subjt:  AK
A0A5D3DCN3 Protein Ycf2-like1.2e-2150.5Show/hide
Query:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA
        ++++ D+++M+DD E+F+ YPWG +AF+LLV +M + V SKG  GI +      +LAWAY+VIPTLS PP  +A RI N VP+IINW A+ Q +W+DL  
Subjt:  VNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGM------LLAWAYKVIPTLSVPPTEWAKRIRNTVPKIINWDANSQQEWRDLHA

Query:  K
        K
Subjt:  K
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAAGGAAAAGCAACCTTCAAACATAAGAGCTAGTGCACGGTTAAAGGTTGTTGGGGGTAAAGACTACGAGGACAAAAAAGAAGAATCAAACTCTGATGGAGTTGG
TTACCGACGAAGAGGTAGTCCATTGTTTTTGACTACTAAACGAGACCGTGGGGATGAAGGGACTGGGAAGAATAAACCAACCAAACAAAGATTAGCGAAAAAGAATGAAC
CTGATGAAGATAAACATGGGAATAGCGAGGCTGATGATGACACTAGCGAAGAAAGTACTGACGATGTGGATAAAATCGACGACGATAGAGACGAAGAAACTGATATCGAT
ACACCAACTACAAGTGATGAAGAGCAACCTGCCAGGAAGAAGAATAAGAAGAAGAAGATTGACTCGGGGAAGCGGAAAATGATCTCAATAAAGAAACCTGTTGAAGAACA
ACATGATACAAAGAAGGTCAACATTGAAGAAGATCACCTCTTAATGATCGATGATACAGAGATGTTCAACAACTACCCATGGGGTGGCATGGCATTCCAATTGCTGGTGA
GCTACATGAAGAAAGTTGTGGTAAGTAAGGGCAACAAGGGTATAGGAATGCTCCTAGCCTGGGCATACAAAGTCATCCCTACACTAAGCGTACCACCAACCGAGTGGGCA
AAACGAATACGGAATACAGTGCCCAAAATTATCAATTGGGATGCAAACTCACAACAAGAATGGAGGGACTTGCATGCCAAAAATTTGAAAACCCAGCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCAAGGAAAAGCAACCTTCAAACATAAGAGCTAGTGCACGGTTAAAGGTTGTTGGGGGTAAAGACTACGAGGACAAAAAAGAAGAATCAAACTCTGATGGAGTTGG
TTACCGACGAAGAGGTAGTCCATTGTTTTTGACTACTAAACGAGACCGTGGGGATGAAGGGACTGGGAAGAATAAACCAACCAAACAAAGATTAGCGAAAAAGAATGAAC
CTGATGAAGATAAACATGGGAATAGCGAGGCTGATGATGACACTAGCGAAGAAAGTACTGACGATGTGGATAAAATCGACGACGATAGAGACGAAGAAACTGATATCGAT
ACACCAACTACAAGTGATGAAGAGCAACCTGCCAGGAAGAAGAATAAGAAGAAGAAGATTGACTCGGGGAAGCGGAAAATGATCTCAATAAAGAAACCTGTTGAAGAACA
ACATGATACAAAGAAGGTCAACATTGAAGAAGATCACCTCTTAATGATCGATGATACAGAGATGTTCAACAACTACCCATGGGGTGGCATGGCATTCCAATTGCTGGTGA
GCTACATGAAGAAAGTTGTGGTAAGTAAGGGCAACAAGGGTATAGGAATGCTCCTAGCCTGGGCATACAAAGTCATCCCTACACTAAGCGTACCACCAACCGAGTGGGCA
AAACGAATACGGAATACAGTGCCCAAAATTATCAATTGGGATGCAAACTCACAACAAGAATGGAGGGACTTGCATGCCAAAAATTTGAAAACCCAGCGGTAA
Protein sequenceShow/hide protein sequence
MIKEKQPSNIRASARLKVVGGKDYEDKKEESNSDGVGYRRRGSPLFLTTKRDRGDEGTGKNKPTKQRLAKKNEPDEDKHGNSEADDDTSEESTDDVDKIDDDRDEETDID
TPTTSDEEQPARKKNKKKKIDSGKRKMISIKKPVEEQHDTKKVNIEEDHLLMIDDTEMFNNYPWGGMAFQLLVSYMKKVVVSKGNKGIGMLLAWAYKVIPTLSVPPTEWA
KRIRNTVPKIINWDANSQQEWRDLHAKNLKTQR