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Tan0005808 (gene) of Snake gourd v1 genome

Gene IDTan0005808
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG04:4603921..4608342
RNA-Seq ExpressionTan0005808
SyntenyTan0005808
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_040245058.1 uncharacterized protein LOC120964434 [Aegilops tauschii subsp. strangulata]1.3e-0634.91Show/hide
Query:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY
        +D+++++FH+NG+ V   N+  Y+GG+E    IDRD LS+ EL   + +   +V  +QC  YW L PG ++  GL  + DD  +L M   +       +Y
Subjt:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY

Query:  VQ-HTP
        V+ H P
Subjt:  VQ-HTP

XP_040249196.1 uncharacterized protein LOC120966746 [Aegilops tauschii subsp. strangulata]1.3e-0634.91Show/hide
Query:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY
        +D+++++FH+NG+ V   N+  Y+GG+E    IDRD LS+ EL   + +   +V  +QC  YW L PG ++  GL  + DD  +L M   +       +Y
Subjt:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY

Query:  VQ-HTP
        V+ H P
Subjt:  VQ-HTP

XP_040253503.1 uncharacterized protein LOC120970596, partial [Aegilops tauschii subsp. strangulata]1.3e-0634.91Show/hide
Query:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY
        +D+++++FH+NG+ V   N+  Y+GG+E    IDRD LS+ EL   + +   +V  +QC  YW L PG ++  GL  + DD  +L M   +       +Y
Subjt:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY

Query:  VQ-HTP
        V+ H P
Subjt:  VQ-HTP

XP_040253504.1 uncharacterized protein LOC120970597, partial [Aegilops tauschii subsp. strangulata]1.3e-0634.91Show/hide
Query:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY
        +D+++++FH+NG+ V   N+  Y+GG+E    IDRD LS+ EL   + +   +V  +QC  YW L PG ++  GL  + DD  +L M   +       +Y
Subjt:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY

Query:  VQ-HTP
        V+ H P
Subjt:  VQ-HTP

XP_040257983.1 uncharacterized protein LOC120975471 [Aegilops tauschii subsp. strangulata]2.2e-0634.31Show/hide
Query:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY
        +D+++++FH+NG+ V   N+  Y+GG+E    IDRD LS+ EL   + +   +V  +QC  YW L PG ++  GL  + DD  +L M   +       +Y
Subjt:  MDIVNLIFHFNGQLVVADNY-EYVGGTEISLTIDRDMLSVIELNTLMSE--ANVFNVQC--YWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIY

Query:  VQ
        V+
Subjt:  VQ

TrEMBL top hitse value%identityAlignment
A0A1R3GXY7 Uncharacterized protein3.2e-0630.91Show/hide
Query:  MDIVNLIFHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIYVQHT
        MD+  L FH+ G      D   Y GG    L +D D LS  ELN ++      N++  +Y +    L  G+ +I  D  + SMV+ +  +  +H+YV+H 
Subjt:  MDIVNLIFHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIYVQHT

Query:  PNEEVMPLEL
          E  + L L
Subjt:  PNEEVMPLEL

A0A1R3IJ77 Uncharacterized protein1.6e-0536.19Show/hide
Query:  FHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLI--RGD-NTLHIYVQHTPNEE
        FH++G  V   ++  Y  G    L ID D LS IEL  L+ +A   NV   +Y +PG  + RGL LI  D D+L M   +  RG+ +T  ++    P++ 
Subjt:  FHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLI--RGD-NTLHIYVQHTPNEE

Query:  VMPLE
        V+ LE
Subjt:  VMPLE

A0A1R3J1E7 Uncharacterized protein3.2e-0636.19Show/hide
Query:  FHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIYVQH---TPNEE
        FH++G  V   ++  Y  G    L ID D LS IEL  L+ +A   NV   +Y +PG  + +GL LI  D D+L M   +     + IYV H    P++ 
Subjt:  FHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIYVQH---TPNEE

Query:  VMPLE
        V+ LE
Subjt:  VMPLE

A0A1R3JV32 Uncharacterized protein4.1e-0633.33Show/hide
Query:  DIVNLIFHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVS-LIRGDNTLHIYVQH
        D   + FH+ G  V   + + Y GG    LT D D +S  +LN +  +A   NV    YL+PG  L +G+  I++D  +L MVS ++   N + I+++H
Subjt:  DIVNLIFHFNGQLV-VADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVS-LIRGDNTLHIYVQH

A0A6A4LZC9 DBD_Tnp_Mut domain-containing protein (Fragment)2.7e-0532.63Show/hide
Query:  HFNGQLVVADN-YEYVGGTEISLT-IDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIYVQHTPN
        H++G+LVV  N   YVGG       +D D + +IEL  ++ E N+F    Y Y  P   L  G   + DD D + MV  ++   T+ +Y+++  N
Subjt:  HFNGQLVVADN-YEYVGGTEISLT-IDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIYVQHTPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATCGTTAATCTCATATTTCATTTCAATGGTCAACTTGTTGTAGCCGATAATTATGAATATGTTGGGGGAACTGAGATTTCTTTGACTATTGATAGGGACATGTT
GTCTGTAATTGAGTTAAATACATTGATGTCAGAAGCAAATGTATTTAATGTTCAATGTTATTGGTATTTAAAACCTGGTTCAAAACTACCTCGTGGTTTGTGTTTAATTA
GTGATGATGAAGATATCCTAAGTATGGTAAGTCTCATTCGTGGGGATAACACTTTGCACATATATGTTCAACATACCCCAAATGAAGAAGTAATGCCTTTAGAATTGAAT
TATACCCACACATCTAGTCATAACTCTCTTGAGTTTGAAAAGAATGATCTAGTTTCTGATGGGAGAGAGATTTTTCGCAACAACCTCAACCTTCTGGAGCTACAGTATAA
GATTAGTAGAAGTCATTACATCTTCAAATTTAGAGGTTACAAAGGCAATTTCAAGAAGATTATTATCGATAGGAAGAAGAAAAGTCGGATGAATGGGGAGCATAATAATC
GATTAAACCTTTTTAAAATTAATTTGATACTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATCGTTAATCTCATATTTCATTTCAATGGTCAACTTGTTGTAGCCGATAATTATGAATATGTTGGGGGAACTGAGATTTCTTTGACTATTGATAGGGACATGTT
GTCTGTAATTGAGTTAAATACATTGATGTCAGAAGCAAATGTATTTAATGTTCAATGTTATTGGTATTTAAAACCTGGTTCAAAACTACCTCGTGGTTTGTGTTTAATTA
GTGATGATGAAGATATCCTAAGTATGGTAAGTCTCATTCGTGGGGATAACACTTTGCACATATATGTTCAACATACCCCAAATGAAGAAGTAATGCCTTTAGAATTGAAT
TATACCCACACATCTAGTCATAACTCTCTTGAGTTTGAAAAGAATGATCTAGTTTCTGATGGGAGAGAGATTTTTCGCAACAACCTCAACCTTCTGGAGCTACAGTATAA
GATTAGTAGAAGTCATTACATCTTCAAATTTAGAGGTTACAAAGGCAATTTCAAGAAGATTATTATCGATAGGAAGAAGAAAAGTCGGATGAATGGGGAGCATAATAATC
GATTAAACCTTTTTAAAATTAATTTGATACTTTAA
Protein sequenceShow/hide protein sequence
MDIVNLIFHFNGQLVVADNYEYVGGTEISLTIDRDMLSVIELNTLMSEANVFNVQCYWYLKPGSKLPRGLCLISDDEDILSMVSLIRGDNTLHIYVQHTPNEEVMPLELN
YTHTSSHNSLEFEKNDLVSDGREIFRNNLNLLELQYKISRSHYIFKFRGYKGNFKKIIIDRKKKSRMNGEHNNRLNLFKINLIL