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Tan0005821 (gene) of Snake gourd v1 genome

Gene IDTan0005821
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich protein
Genome locationLG02:3690328..3690624
RNA-Seq ExpressionTan0005821
SyntenyTan0005821
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059145.1 hypothetical protein E6C27_scaffold430G00610 [Cucumis melo var. makuwa]2.1e-1656Show/hide
Query:  SNSNNRAFAFL-GLVLAVIVVNI-SSEVAARDLLQTSKYGRGEHGGSADSPGCGNYYNRRCGGYGRGG---GCQHGCCGDNRDGRCSKCCSFAIEVVDLK
        ++SN+R F F+  LV ++IVV + SS+VA RDLL         HG SAD+PGCGNY   RCGGYGRGG   GC HGCCG NR GRC +CC++A EV ++K
Subjt:  SNSNNRAFAFL-GLVLAVIVVNI-SSEVAARDLLQTSKYGRGEHGGSADSPGCGNYYNRRCGGYGRGG---GCQHGCCGDNRDGRCSKCCSFAIEVVDLK

KAG6589123.1 hypothetical protein SDJN03_17688, partial [Cucurbita argyrosperma subsp. sororia]6.8e-2066.67Show/hide
Query:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV
        MSSN   +AFAFLGLVL VIVV+ISS+VAARDLLQT KY RG++G   G  D+PGCGNY +  C G+G  GGCQHGCCG    GRCSKCCS   EV
Subjt:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV

XP_022930692.1 glycine-rich protein DC7.1-like [Cucurbita moschata]8.9e-2067.71Show/hide
Query:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV
        MSSN   +AFAFLGLVL VIVV+ISSEVAARDLLQT KY RG +G   G  D+PGCGNY +  C G+G  GGCQHGCCG    GRCSKCCS   EV
Subjt:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV

XP_022989540.1 glycine-rich protein DC7.1-like [Cucurbita maxima]2.4e-2064.95Show/hide
Query:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEVV
        MSSN   +AFAFLGLVL V+VV+ISSEVAARDLLQT KY RG++G   G  D PGCGNY++  C G+G  GGCQHGCCG    GRCSKCCS   E +
Subjt:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEVV

XP_023530312.1 glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]1.8e-2066.67Show/hide
Query:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV
        MSSN   +AFAFLGLVLA++VV+ISSEVAARDLLQT KY RG++G   G  D+PGCGNY +  C G+G  GGCQHGCCG    GRCSKCCS   EV
Subjt:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV

TrEMBL top hitse value%identityAlignment
A0A0A0K6K9 Uncharacterized protein2.9e-1655.67Show/hide
Query:  SNNRAFAFL-GLVLAVIVVNI-SSEVAARDLLQTSKYGRGEHGGSADSPGCGNYYNRRCGGYGRGG---GCQHGCCGDNRDGRCSKCCSFAIEVVDL
        SN++ F F+  LV +++VV + S +VAARDLL   +      G SAD+PGCGNYY  RCGGYGRGG   GC HGCCG NRDGRC +CC++A EV ++
Subjt:  SNNRAFAFL-GLVLAVIVVNI-SSEVAARDLLQTSKYGRGEHGGSADSPGCGNYYNRRCGGYGRGG---GCQHGCCGDNRDGRCSKCCSFAIEVVDL

A0A5D3BTN8 Uncharacterized protein1.0e-1656Show/hide
Query:  SNSNNRAFAFL-GLVLAVIVVNI-SSEVAARDLLQTSKYGRGEHGGSADSPGCGNYYNRRCGGYGRGG---GCQHGCCGDNRDGRCSKCCSFAIEVVDLK
        ++SN+R F F+  LV ++IVV + SS+VA RDLL         HG SAD+PGCGNY   RCGGYGRGG   GC HGCCG NR GRC +CC++A EV ++K
Subjt:  SNSNNRAFAFL-GLVLAVIVVNI-SSEVAARDLLQTSKYGRGEHGGSADSPGCGNYYNRRCGGYGRGG---GCQHGCCGDNRDGRCSKCCSFAIEVVDLK

A0A6J1ERA6 glycine-rich protein DC7.1-like4.3e-2067.71Show/hide
Query:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV
        MSSN   +AFAFLGLVL VIVV+ISSEVAARDLLQT KY RG +G   G  D+PGCGNY +  C G+G  GGCQHGCCG    GRCSKCCS   EV
Subjt:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEV

A0A6J1JMN0 glycine-rich protein DC7.1-like1.1e-2064.95Show/hide
Query:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEVV
        MSSN   +AFAFLGLVL V+VV+ISSEVAARDLLQT KY RG++G   G  D PGCGNY++  C G+G  GGCQHGCCG    GRCSKCCS   E +
Subjt:  MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHG---GSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEVV

W9RMN0 Uncharacterized protein5.0e-0840.68Show/hide
Query:  NRAFAFLGLVLAVIVVNISSEVAARDLLQTSK--------------YGRGEHGGSADSPGCGNYYNRRCGGYGRGG--------------GCQHGCCGDN
        ++ F  LGL+ A+++V ISSEVAA+D+ +TS                G  +HGG    PG GNY   R GG G GG              GC HGCC  N
Subjt:  NRAFAFLGLVLAVIVVNISSEVAARDLLQTSK--------------YGRGEHGGSADSPGCGNYYNRRCGGYGRGG--------------GCQHGCCGDN

Query:  RDGR-CSKCCSFAIEVVD
          G+ CS+CCS+A E VD
Subjt:  RDGR-CSKCCSFAIEVVD

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein2.0e-0642.72Show/hide
Query:  NRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGR--GEHGGSADSPGCGN------YYNRRCGGYGRGG------GCQHGCCGDNRDGRCSKCCSFAIE
        ++AF FLGL LA   + ISSEV A +L +TS   +  GE+G   D  G  N      YY    GG GRGG      GC++GCC    +G C +CCS+A E
Subjt:  NRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGR--GEHGGSADSPGCGN------YYNRRCGGYGRGG------GCQHGCCGDNRDGRCSKCCSFAIE

Query:  VVD
         +D
Subjt:  VVD

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAACTCCAACAATAGGGCTTTTGCTTTTTTGGGTCTTGTCTTGGCCGTCATCGTCGTCAACATCTCCTCAGAAGTGGCGGCAAGAGACCTTTTACAGACTTC
CAAGTACGGCCGGGGAGAGCACGGTGGCTCAGCCGACAGCCCTGGCTGCGGTAATTACTATAACAGACGATGCGGTGGATACGGTCGTGGTGGTGGTTGCCAGCATGGTT
GCTGCGGTGACAATCGCGACGGTCGGTGCAGCAAGTGTTGCAGCTTTGCTATTGAAGTTGTAGACCTAAAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAACTCCAACAATAGGGCTTTTGCTTTTTTGGGTCTTGTCTTGGCCGTCATCGTCGTCAACATCTCCTCAGAAGTGGCGGCAAGAGACCTTTTACAGACTTC
CAAGTACGGCCGGGGAGAGCACGGTGGCTCAGCCGACAGCCCTGGCTGCGGTAATTACTATAACAGACGATGCGGTGGATACGGTCGTGGTGGTGGTTGCCAGCATGGTT
GCTGCGGTGACAATCGCGACGGTCGGTGCAGCAAGTGTTGCAGCTTTGCTATTGAAGTTGTAGACCTAAAATCTTAG
Protein sequenceShow/hide protein sequence
MSSNSNNRAFAFLGLVLAVIVVNISSEVAARDLLQTSKYGRGEHGGSADSPGCGNYYNRRCGGYGRGGGCQHGCCGDNRDGRCSKCCSFAIEVVDLKS