CuGenDBv2

Gene ID	Tan0005845
Organism	Trichosanthes anguina (Snake gourd v1)
Description	plastid division protein PDV2-like
Genome location	LG05:17721285..17726185
RNA-Seq Expression	Tan0005845
Synteny	Tan0005845
Gene Ontology terms	GO:0010020 - chloroplast fission (biological process) GO:0005488 - binding (molecular function)
InterPro domains	IPR038939 - Plastid division protein PDV1/PDV2

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605103.1 Plastid division protein PDV2, partial [Cucurbita argyrosperma subsp. sororia]

1.8e-55

56.85

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Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL V     RY R + +    +S      + ++ K EHLEVINEA AF GEAVEHNHDLMLP +P+R  Y+LHLNN  L P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI
        +           L+Y TNDAKRE +ESLTTSKQ+STR+S N LGSLI A    VFTIVGVV + S S                     EQPST+E+ P I
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI

Query:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        +C PGKIL VEDGEA+C+VKERVEVPFSS V KPDVN  CG
Subjt:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

XP_022148665.1 plastid division protein PDV2 [Momordica charantia]

4.0e-55

56.61

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Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL       RY R + +    +S +      +  K EHLEVINEA AF GEAVEHNHDLMLP +PSRP YSLH NN H+ P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPST-EEDTPK
        +           LSY+TN+AK+E +ESLT SKQ+STRNS N LGSLI      VFTIVGVV + S S                     EQPST EE+ P+
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPST-EEDTPK

Query:  IQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        IQC PGKIL VEDGE +C+VKERVEVPFSS V KPDVN  CG
Subjt:  IQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

XP_022947860.1 plastid division protein PDV2-like [Cucurbita moschata]

1.3e-56

57.26

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Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL V     RY R + +    +S      + ++ K EHLEVINEA AF GEAVEHNHDLMLP +P+RP Y+LHLNN  L P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI
        +           L+Y TNDAKRE +ESLTTSKQ+STR+S N LGSLI A    VFTIVGVV + S S                     EQPST+E+ P I
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI

Query:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        +C PGKIL VEDGEA+C+VKERVEVPFSS V KPDVN  CG
Subjt:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

XP_023006832.1 plastid division protein PDV2-like [Cucurbita maxima]

1.5e-54

56.02

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Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL       RY R + +    +S      + +  K EHLEVINEA AF GEAVEHNHDLMLP +P+RP Y+LHLNN  L P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI
        +           L+Y TNDAKRE +ESLTTSKQ STR+S N LGSL+ A    VFTIVGVV + S S                     E P TEE+ P I
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI

Query:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        +C PGKIL VEDGEA+C+VKERVEVPFSS V KPDVN  CG
Subjt:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

XP_023533133.1 plastid division protein PDV2-like [Cucurbita pepo subsp. pepo]

3.4e-54

56.02

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Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL       RY R + +    +S      + ++ K EHLEVINEA AF GEAVEHNHDLMLP +P+RP Y+LHLNN  L P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI
        +           L+Y TNDA+RE +ESLTTSKQ STR+S N LGSLI A    VFTIVGVV + S S                     EQPST+E+   I
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI

Query:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        +C PGKIL VEDGEA+C+VKERVEVPFSS V KPDVN  CG
Subjt:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E332 plastid division protein PDV2

1.9e-50

52.02

Show/hide

Query:  IEDHQLHSQERLLNICDVLESLETQLS---SLHVFPRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLH
        +ED +    ERLL ICD LESLETQLS    L    +Y R + +    +S      + +  K E+LEV+ EA AF GEAV++NHDLMLP +PSR TY LH
Subjt:  IEDHQLHSQERLLNICDVLESLETQLS---SLHVFPRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLH

Query:  LNNDHLQPCILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS--------------------EQPS
        L+NDHL P +           LSYMTNDAKRE +ESL+TSK++ST+N+ N LGSLI A    VFTIVGVV + S S                    +Q S
Subjt:  LNNDHLQPCILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS--------------------EQPS

Query:  TEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCEC
        TEE+ P+ QC PGKIL VEDGE +C+VKERVEVPFSS V KPDVN  C
Subjt:  TEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCEC

A0A5D3CR19 Plastid division protein PDV2

2.9e-51

52.21

Show/hide

Query:  IEDHQLHSQERLLNICDVLESLETQLS---SLHVFPRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLH
        +ED +    ERLL ICD LESLETQLS    L    +Y R + +    +S      + +  K E+LEV+ EA AF GEAV++NHDLMLP +PSR TY LH
Subjt:  IEDHQLHSQERLLNICDVLESLETQLS---SLHVFPRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLH

Query:  LNNDHLQPCILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS--------------------EQPS
        L+NDHL P +           LSYMTNDAKRE +ESL+TSK++ST+N+ N LGSLI A    VFTIVGVV + S S                    +Q S
Subjt:  LNNDHLQPCILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS--------------------EQPS

Query:  TEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        TEE+ P+ QC PGKIL VEDGE +C+VKERVEVPFSS V KPDVN  CG
Subjt:  TEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

A0A6J1D3J0 plastid division protein PDV2

2.0e-55

56.61

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Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL       RY R + +    +S +      +  K EHLEVINEA AF GEAVEHNHDLMLP +PSRP YSLH NN H+ P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPST-EEDTPK
        +           LSY+TN+AK+E +ESLT SKQ+STRNS N LGSLI      VFTIVGVV + S S                     EQPST EE+ P+
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPST-EEDTPK

Query:  IQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        IQC PGKIL VEDGE +C+VKERVEVPFSS V KPDVN  CG
Subjt:  IQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

A0A6J1G827 plastid division protein PDV2-like

6.1e-57

57.26

Show/hide

Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL V     RY R + +    +S      + ++ K EHLEVINEA AF GEAVEHNHDLMLP +P+RP Y+LHLNN  L P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI
        +           L+Y TNDAKRE +ESLTTSKQ+STR+S N LGSLI A    VFTIVGVV + S S                     EQPST+E+ P I
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI

Query:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        +C PGKIL VEDGEA+C+VKERVEVPFSS V KPDVN  CG
Subjt:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

A0A6J1KWX0 plastid division protein PDV2-like

7.4e-55

56.02

Show/hide

Query:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC
        ERLLNICD LESLETQLSSL       RY R + +    +S      + +  K EHLEVINEA AF GEAVEHNHDLMLP +P+RP Y+LHLNN  L P 
Subjt:  ERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYS-----TRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPC

Query:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI
        +           L+Y TNDAKRE +ESLTTSKQ STR+S N LGSL+ A    VFTIVGVV + S S                     E P TEE+ P I
Subjt:  ILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVA---TVFTIVGVVVVFSGS---------------------EQPSTEEDTPKI

Query:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG
        +C PGKIL VEDGEA+C+VKERVEVPFSS V KPDVN  CG
Subjt:  QCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDVNCECG

SwissProt top hits

e value

%identity

Alignment

Q9XII1 Plastid division protein PDV2

3.1e-18

32.02

Show/hide

Query:  EDHQLHSQERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHL
        ED      ERLL I D LE+LE+QL+SL       +Y ++  +    YS +      +  K +  EV+ E   F GE V++ +DL+LP +P  P  SL L
Subjt:  EDHQLHSQERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHL

Query:  NNDHLQPCILVCSETVRPPILSYMTNDAKREL---------NESLTTSKQSSTRNSNNP----LGSLIVATVFTIVGVVVVFSGS---------------
        +N++                LS++ +  K +          NE+   S    +  S++     LGS +   V  I+GV+ + S S               
Subjt:  NNDHLQPCILVCSETVRPPILSYMTNDAKREL---------NESLTTSKQSSTRNSNNP----LGSLIVATVFTIVGVVVVFSGS---------------

Query:  -----EQPSTEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDV
              + +  + TP  QC PGK+L +EDGEA+C+VKERVE+PF SVV K DV
Subjt:  -----EQPSTEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDV

Arabidopsis top hits

e value

%identity

Alignment

AT2G16070.1 plastid division2

2.5e-15

32.12

Show/hide

Query:  KEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPCILVCSETVRPPILSYMTNDAKREL---------NESLTTSKQSSTRNSNNP-
        K +  EV+ E   F GE V++ +DL+LP +P  P  SL L+N++                LS++ +  K +          NE+   S    +  S++  
Subjt:  KEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQPCILVCSETVRPPILSYMTNDAKREL---------NESLTTSKQSSTRNSNNP-

Query:  ---LGSLIVATVFTIVGVVVVFSGS--------------------EQPSTEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDV
           LGS +   V  I+GV+ + S S                     + +  + TP  QC PGK+L +EDGEA+C+VKERVE+PF SVV K DV
Subjt:  ---LGSLIVATVFTIVGVVVVFSGS--------------------EQPSTEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDV

AT2G16070.2 plastid division2

2.2e-19

32.02

Show/hide

Query:  EDHQLHSQERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHL
        ED      ERLL I D LE+LE+QL+SL       +Y ++  +    YS +      +  K +  EV+ E   F GE V++ +DL+LP +P  P  SL L
Subjt:  EDHQLHSQERLLNICDVLESLETQLSSLHVF---PRYVRRSNIVTRWYSTRS-----RSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHL

Query:  NNDHLQPCILVCSETVRPPILSYMTNDAKREL---------NESLTTSKQSSTRNSNNP----LGSLIVATVFTIVGVVVVFSGS---------------
        +N++                LS++ +  K +          NE+   S    +  S++     LGS +   V  I+GV+ + S S               
Subjt:  NNDHLQPCILVCSETVRPPILSYMTNDAKREL---------NESLTTSKQSSTRNSNNP----LGSLIVATVFTIVGVVVVFSGS---------------

Query:  -----EQPSTEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDV
              + +  + TP  QC PGK+L +EDGEA+C+VKERVE+PF SVV K DV
Subjt:  -----EQPSTEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVPKPDV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTGGAGGTCCGTTGTCCTTAACAATAGACATATTGAAGATCATCAACTGCATTCACAAGAACGACTTTTGAATATTTGCGATGTCCTCGAGTCCTTGGAGACCCAACT
CTCTTCTTTGCACGTTTTCCCTCGATATGTACGAAGATCGAACATAGTCACAAGATGGTACTCGACAAGGTCAAGGAGTACAAAAGAGGAGCATTTGGAAGTGATAAATG
AAGCTTGTGCCTTTGTTGGGGAGGCAGTAGAGCACAACCATGACCTCATGTTGCCTCTACATCCAAGTCGTCCTACGTATTCTCTTCACCTAAACAATGACCATTTGCAA
CCATGCATCCTTGTCTGCTCGGAAACTGTGAGACCCCCAATTTTGAGCTACATGACCAACGACGCTAAAAGGGAGCTAAATGAGTCGTTGACTACCAGCAAACAATCGAG
CACAAGAAACTCAAACAATCCATTAGGTTCACTCATAGTTGCAACAGTGTTTACCATTGTTGGTGTTGTAGTCGTATTTAGTGGGTCCGAACAACCATCGACTGAAGAAG
ACACACCAAAAATTCAATGTCTGCCGGGGAAAATTCTTGCAGTGGAAGACGGGGAGGCGCAATGCATGGTGAAAGAGAGAGTCGAAGTTCCATTTTCTTCTGTTGTGCCA
AAACCAGATGTGAACTGTGAATGTGGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MWRSVVLNNRHIEDHQLHSQERLLNICDVLESLETQLSSLHVFPRYVRRSNIVTRWYSTRSRSTKEEHLEVINEACAFVGEAVEHNHDLMLPLHPSRPTYSLHLNNDHLQ
PCILVCSETVRPPILSYMTNDAKRELNESLTTSKQSSTRNSNNPLGSLIVATVFTIVGVVVVFSGSEQPSTEEDTPKIQCLPGKILAVEDGEAQCMVKERVEVPFSSVVP
KPDVNCECG

Tan0005845 (gene) of Snake gourd v1 genome