; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005857 (gene) of Snake gourd v1 genome

Gene IDTan0005857
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSWIM-type domain-containing protein
Genome locationLG06:10807808..10810090
RNA-Seq ExpressionTan0005857
SyntenyTan0005857
Gene Ontology termsNA
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7138490.1 hypothetical protein RHSIM_Rhsim07G0255600 [Rhododendron simsii]6.6e-4149.44Show/hide
Query:  MKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTS
        ++F +FK   E      F  GMLF+SL +FK A++ YAV GG+GI+F KND+ RVRA C + C +    SK+  +ETFQLKT   EH C+R ++N RL+S
Subjt:  MKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTS

Query:  SWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILK
         +L+ +L  +VKD P ++L+ IQ+KV  +++ QI R KAYRAKR ALD V GS+ EQY  LW+YC EL  S+PGST +++
Subjt:  SWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILK

KAF7153765.1 hypothetical protein RHSIM_Rhsim01G0020300 [Rhododendron simsii]1.9e-4052.02Show/hide
Query:  FEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVE--GCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSWLSKRLENEVKDHP
        FE GM+F SL++FK AV  YA+ GG+GI+F KNDK RVRA C +   C +    SK+  + TFQ+KT V EH C+R ++N RL S +LS +L N+VKD P
Subjt:  FEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVE--GCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSWLSKRLENEVKDHP

Query:  EMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEE
         +KL+ IQ++VQ++Y+  I R KAYRAKR A+DKV GS+AEQY  LW+YC EL  S+ GST  +K+ ++   E
Subjt:  EMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEE

XP_022153708.1 uncharacterized protein LOC111021158 [Momordica charantia]1.8e-6259.3Show/hide
Query:  KMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLT
        ++K+P +++   +     FE+GM FNSL EFKN V+ YAVKGGW IRF KNDK RVRAKCV+GCKWLAY +K+QGE T+QLKT+V EH+CSR F NP LT
Subjt:  KMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLT

Query:  SSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERI
        S WL +++ N+VK+ P+++L  IQ+KVQR+YISQI + KA+RAK+LALD V GS+ EQ   LWEYC E+H S+PGS+ +L L + QE+EE +G+PI RI
Subjt:  SSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERI

XP_023896782.1 uncharacterized protein LOC112008678 [Quercus suber]2.7e-4250Show/hide
Query:  SKMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRL
        ++ KFP FKQ      M  FE  MLF S  +FK+A+  YAV GGWG++F KNDK+RVRAKC   CK+ AY +K+  E ++QLKT   EHTC+R ++NPR 
Subjt:  SKMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRL

Query:  TSSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILK
        T+ +L+++L  +V+  P +KL  IQ+ V  +Y+  I  GKA RA+  A + V GSY EQY QLW+YC EL  SSPGST ++K
Subjt:  TSSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILK

XP_023914573.1 uncharacterized protein LOC112026126 [Quercus suber]8.7e-4147.25Show/hide
Query:  KMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLT
        K K+P F+  + +     FE  MLF S  +FK+A+  YAV GGWGI+F KND +RVRA+C  GC ++AY +K+  E++F+LKT   EHTCSR ++NPR T
Subjt:  KMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLT

Query:  SSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKL
        +S++ K+L   V+  P++KL  IQ  V  +Y+  I  GKA RA+  A D V G++  Q+ QLWEYC+EL   SPGST ++K+
Subjt:  SSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKL

TrEMBL top hitse value%identityAlignment
A0A2N9ES33 Uncharacterized protein2.6e-5154.84Show/hide
Query:  FPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSW
        FP F+       +  FE+GMLF S  +FK A+  YAV+GGWGIRF KNDK+RVRA C EGCK++AY +K+  E TFQLKT   EH+CSRCF+NPR+T+ +
Subjt:  FPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSW

Query:  LSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEE
        L+K+L   VKD P++KL  IQKKV R+Y++ I + KAYRAK  A+D + GS+ EQY  LW+YCEEL  S+PGST ++K++   E E
Subjt:  LSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEE

A0A2N9GPL9 Uncharacterized protein2.5e-4953.3Show/hide
Query:  FEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSWLSKRLENEVKDHPEM
        FE G+LF S  +FK A+  YAV+GGWGI+F KNDK+RVRA C EGCK++AY +K+  E TFQLKT   +H+C+RC++NPR+T+ +L+K+L   VKD P++
Subjt:  FEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSWLSKRLENEVKDHPEM

Query:  KLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERIR
        KL  IQKKV ++Y++ I + KAYRAK  A+D + GS+ EQY  LW+YCEEL  S+PGST ++K++ S  E E   E + +IR
Subjt:  KLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERIR

A0A2N9H0G1 Uncharacterized protein1.2e-5153.3Show/hide
Query:  FPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSW
        FP F+       +  FE+GMLF S  +FK A+  YAV+GGWGIRF KNDK+RVRA C EGCK++AY +K+  E TFQLKT   EH+CSRCF+NPR+T+ +
Subjt:  FPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSW

Query:  LSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERIR
        L+K+L   VKD P++KL  IQKKV+++Y++ I + KAYRAK  A+D + GS+ EQY  LW+YCEEL  S+PGST ++K++ S  E E   E + +IR
Subjt:  LSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERIR

A0A2N9HKG1 SWIM-type domain-containing protein5.8e-5154.3Show/hide
Query:  FPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSW
        FP F+       +  FE+GMLF S  +FK A+  YAV+GGWGIRF KNDK+RVRA C EGCK++AY +K+  E TFQLKT   EH+CSRCF+NPR+T+ +
Subjt:  FPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSW

Query:  LSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEE
        L+K+L   VKD P++KL  IQKKV ++Y++ I + KAYRAK  A+D + GS+ EQY  LW+YCEEL  S+PGST ++K++   E E
Subjt:  LSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEE

A0A6J1DI69 uncharacterized protein LOC1110211588.7e-6359.3Show/hide
Query:  KMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLT
        ++K+P +++   +     FE+GM FNSL EFKN V+ YAVKGGW IRF KNDK RVRAKCV+GCKWLAY +K+QGE T+QLKT+V EH+CSR F NP LT
Subjt:  KMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIRFTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLT

Query:  SSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERI
        S WL +++ N+VK+ P+++L  IQ+KVQR+YISQI + KA+RAK+LALD V GS+ EQ   LWEYC E+H S+PGS+ +L L + QE+EE +G+PI RI
Subjt:  SSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAEQYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTATATTAACGTACATTATTTAAGTATATTATTTAAATATATCAATGAATTAGTTTCCAATTGTAAAGGAGAGATCGAAGGATTTTTTTTAGGAGAAGTCAATTT
TCAATTGCATATGGATGTGTTTGTAGTTGAGATACATCATGGTGGGATGACTCGTCCGATTGGACAAGGATGCAAGAGTAAGATGAAGTTCCCATCCTTCAAGCAAAACA
TGGAGGAAAATAGCATGACCAACTTTGAAATCGGTATGTTATTTAATTCTTTGAGTGAGTTTAAGAATGCTGTGAACACTTATGCAGTCAAAGGAGGATGGGGGATTCGT
TTTACAAAAAATGATAAGATGAGAGTTCGAGCAAAATGTGTAGAAGGTTGTAAATGGTTAGCCTATGCATCCAAGATTCAAGGGGAAGAAACCTTTCAATTGAAAACCTA
TGTGAATGAACATACATGTAGTAGATGCTTTAGAAATCCTCGATTGACATCTTCTTGGTTGAGCAAGCGACTAGAAAATGAAGTTAAGGACCATCCAGAAATGAAGCTAA
CTCCCATTCAGAAAAAGGTACAACGTGAGTACATTTCACAAATTTTTAGGGGCAAGGCTTATAGGGCCAAACGTCTAGCATTAGATAAGGTTCGTGGTTCATACGCTGAA
CAATACATTCAATTATGGGAGTACTGTGAGGAATTACATATTTCGAGTCCTGGTAGCACGACAATTTTGAAATTGAAAATCTCTCAAGAGGAAGAGGAGAATAATGGAGA
ACCCATCGAAAGGATTAGGTTGGTACATCAACTGCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGTATATTAACGTACATTATTTAAGTATATTATTTAAATATATCAATGAATTAGTTTCCAATTGTAAAGGAGAGATCGAAGGATTTTTTTTAGGAGAAGTCAATTT
TCAATTGCATATGGATGTGTTTGTAGTTGAGATACATCATGGTGGGATGACTCGTCCGATTGGACAAGGATGCAAGAGTAAGATGAAGTTCCCATCCTTCAAGCAAAACA
TGGAGGAAAATAGCATGACCAACTTTGAAATCGGTATGTTATTTAATTCTTTGAGTGAGTTTAAGAATGCTGTGAACACTTATGCAGTCAAAGGAGGATGGGGGATTCGT
TTTACAAAAAATGATAAGATGAGAGTTCGAGCAAAATGTGTAGAAGGTTGTAAATGGTTAGCCTATGCATCCAAGATTCAAGGGGAAGAAACCTTTCAATTGAAAACCTA
TGTGAATGAACATACATGTAGTAGATGCTTTAGAAATCCTCGATTGACATCTTCTTGGTTGAGCAAGCGACTAGAAAATGAAGTTAAGGACCATCCAGAAATGAAGCTAA
CTCCCATTCAGAAAAAGGTACAACGTGAGTACATTTCACAAATTTTTAGGGGCAAGGCTTATAGGGCCAAACGTCTAGCATTAGATAAGGTTCGTGGTTCATACGCTGAA
CAATACATTCAATTATGGGAGTACTGTGAGGAATTACATATTTCGAGTCCTGGTAGCACGACAATTTTGAAATTGAAAATCTCTCAAGAGGAAGAGGAGAATAATGGAGA
ACCCATCGAAAGGATTAGGTTGGTACATCAACTGCATTAG
Protein sequenceShow/hide protein sequence
MKYINVHYLSILFKYINELVSNCKGEIEGFFLGEVNFQLHMDVFVVEIHHGGMTRPIGQGCKSKMKFPSFKQNMEENSMTNFEIGMLFNSLSEFKNAVNTYAVKGGWGIR
FTKNDKMRVRAKCVEGCKWLAYASKIQGEETFQLKTYVNEHTCSRCFRNPRLTSSWLSKRLENEVKDHPEMKLTPIQKKVQREYISQIFRGKAYRAKRLALDKVRGSYAE
QYIQLWEYCEELHISSPGSTTILKLKISQEEEENNGEPIERIRLVHQLH