; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005860 (gene) of Snake gourd v1 genome

Gene IDTan0005860
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCyclin-dependent protein kinase inhibitor SMR4
Genome locationLG04:2282269..2282472
RNA-Seq ExpressionTan0005860
SyntenyTan0005860
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
DAD28235.1 TPA_asm: hypothetical protein HUJ06_029703 [Nelumbo nucifera]1.0e-1157.58Show/hide
Query:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        M+EE    C TP+ R CRIP+A  CP  PRKKP+  K++ PP +GYF+PPDLE+LF  +APR EAC
Subjt:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
KAE8647993.1 hypothetical protein Csa_021483 [Cucumis sativus]3.5e-2380.3Show/hide
Query:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        M EET +LCRTPRRRSCRIPVA +CP+APRKKPVC+KRKAPPK+GYFR PDLE+LF FV PR EAC
Subjt:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
KAG6600042.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2179.69Show/hide
Query:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGE
        M EE  D+CRTPRR+SCRIPVA  CPAAPRKK V +KRKAPPKDGYFRPPDLE+LF FVAPRG+
Subjt:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGE
XP_010262549.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR2 [Nelumbo nucifera]1.0e-1157.58Show/hide
Query:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        M+EE    C TP+ R CRIP+A  CP  PRKKP+  K++ PP +GYF+PPDLE+LF  +APR EAC
Subjt:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
XP_021655298.1 cyclin-dependent protein kinase inhibitor SMR4-like [Hevea brasiliensis]6.5e-1463.08Show/hide
Query:  VEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        +E   ++C TPRRR  RIP A +CP APRKKPV  K+++PPKDGYF+PPDLE LF  +APR EAC
Subjt:  VEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
TrEMBL top hitse value%identityAlignment
A0A0A0KS84 Uncharacterized protein1.7e-2380.3Show/hide
Query:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        M EET +LCRTPRRRSCRIPVA +CP+APRKKPVC+KRKAPPK+GYFR PDLE+LF FV PR EAC
Subjt:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
A0A1U8A7K0 cyclin-dependent protein kinase inhibitor SMR25.1e-1257.58Show/hide
Query:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        M+EE    C TP+ R CRIP+A  CP  PRKKP+  K++ PP +GYF+PPDLE+LF  +APR EAC
Subjt:  MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
A0A5N6QF01 Uncharacterized protein6.6e-1256.92Show/hide
Query:  VEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        VEE+   C TPR   CR+P A +CP AP+KKPV  K++APPK+GYF+PPDLE LF  V+  G  C
Subjt:  VEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
B9T003 Uncharacterized protein5.1e-1267.24Show/hide
Query:  CRTPRRRSCRIPVAP-SCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEA
        CRTP RR CRIP AP +CP APRKKPV +K++ PPKDGYF+PPDLE  F  + PR EA
Subjt:  CRTPRRRSCRIPVAP-SCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEA
V4LK16 Uncharacterized protein1.9e-1155.07Show/hide
Query:  MVEETTDL---CRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        +VE TT++   C TPR R CRIPV   CP  PRKK + ++R+ PP +GYF+PPDLE LF +  PR EAC
Subjt:  MVEETTDL---CRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
SwissProt top hitse value%identityAlignment
Q1JPP8 Cyclin-dependent protein kinase inhibitor SMR42.4e-1150Show/hide
Query:  MVEETTDL----CRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        +VE  T++    C TPR    RIPVA  CP  PRKK + ++++ PP++GYF+PPDLE LF +  PR EAC
Subjt:  MVEETTDL----CRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
Q9LNX4 Cyclin-dependent protein kinase inhibitor SMR51.2e-0749.09Show/hide
Query:  CRTPRRRSCRIPVAPSCPAAPRKKPVCM---KRKAPPKDGYFRPPDLEILFCFVA
        C TP R  CRIP  P CP   R+K   +   K++ PPK GYF+PPDL++ F  VA
Subjt:  CRTPRRRSCRIPVAPSCPAAPRKKPVCM---KRKAPPKDGYFRPPDLEILFCFVA
Arabidopsis top hitse value%identityAlignment
AT1G60783.1 unknown protein1.0e-0442.86Show/hide
Query:  ETTDLC-RTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCF
        E  DLC  TP   S RIP    CP AP+K+ + +K    P++ +F PPDLE +F +
Subjt:  ETTDLC-RTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCF
AT5G02220.1 unknown protein1.7e-1250Show/hide
Query:  MVEETTDL----CRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC
        +VE  T++    C TPR    RIPVA  CP  PRKK + ++++ PP++GYF+PPDLE LF +  PR EAC
Subjt:  MVEETTDL----CRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEAC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAGGAGACGACGGATCTCTGCCGCACGCCGAGACGGAGGAGCTGCCGCATTCCGGTGGCGCCGTCGTGCCCGGCGGCGCCGAGGAAGAAGCCGGTTTGCATGAA
GCGGAAGGCTCCGCCGAAGGACGGGTACTTTCGGCCGCCGGATTTGGAGATTTTGTTCTGCTTTGTTGCTCCAAGAGGAGAAGCTTGTGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAGGAGACGACGGATCTCTGCCGCACGCCGAGACGGAGGAGCTGCCGCATTCCGGTGGCGCCGTCGTGCCCGGCGGCGCCGAGGAAGAAGCCGGTTTGCATGAA
GCGGAAGGCTCCGCCGAAGGACGGGTACTTTCGGCCGCCGGATTTGGAGATTTTGTTCTGCTTTGTTGCTCCAAGAGGAGAAGCTTGTGGTTAG
Protein sequenceShow/hide protein sequence
MVEETTDLCRTPRRRSCRIPVAPSCPAAPRKKPVCMKRKAPPKDGYFRPPDLEILFCFVAPRGEACG