CuGenDBv2

Gene ID	Tan0005864
Organism	Trichosanthes anguina (Snake gourd v1)
Description	protein TAPETUM DETERMINANT 1-like
Genome location	LG03:74295149..74296131
RNA-Seq Expression	Tan0005864
Synteny	Tan0005864
Gene Ontology terms	GO:0001709 - cell fate determination (biological process)
InterPro domains	IPR040361 - Tapetum determinant 1

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7026827.1 hypothetical protein SDJN02_10834, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.6e-47

78.69

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA  A+L  ALLFVS L KGN QCFL+N+TI+Q M+GFQIHGMTEW  T+SN C+CSQSEVKLDCRGFQTT+SIDP ILAI+DTECLVNNGLPIFNS PI
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TFTYA++PQF F PISSQIACS
Subjt:  TFTYARDPQFIFNPISSQIACS

KAG7026828.1 Protein TAPETUM DETERMINANT 1, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.7e-49

78.69

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA F KLF ALLFVS+L KGNCQC  N++ ISQ+M+GFQIHGMTEW VTISNNC+CSQSEVKLDC+GFQTTKSIDPSILA++DTECLVNNGLPIF S P+
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
         FTYA+DP+F F  ISSQIACS
Subjt:  TFTYARDPQFIFNPISSQIACS

XP_022962948.1 uncharacterized protein At1g05835-like [Cucurbita moschata]

1.0e-49

81.97

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA  AKLF ALLFVS LSK N QCFL+N+TI Q M+GFQIHGMTEW  T+SNNC+CSQSEVKLDCRGFQTTKSIDP ILAI+DTECLVNNGLPIFNS PI
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TFTYA++PQF F PISSQIACS
Subjt:  TFTYARDPQFIFNPISSQIACS

XP_023518832.1 uncharacterized protein LOC111782230 [Cucurbita pepo subsp. pepo]

7.4e-48

77.87

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA FA LF ALLFVS+L KGN QC  N++ ISQ+M+GFQIHGMTEW VTISNNC+CSQSEVKLDCRGFQTTKS+DPSILA++DTECLVNNGLPIF S P+
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
         FTYA+DP+F F  ISSQIACS
Subjt:  TFTYARDPQFIFNPISSQIACS

XP_038881121.1 uncharacterized protein At1g05835-like [Benincasa hispida]

1.1e-51

81.15

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA+F KL TALL +S++S GNCQC LNN+TISQRM+GFQIHGMTEWKVTISNNC CSQSEVK+DC+GFQTT+SIDPSILA+ DTECLVNNGLPIFNS PI
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TF+YA+DPQF F PISSQI+CS
Subjt:  TFTYARDPQFIFNPISSQIACS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KLZ6 Uncharacterized protein

3.0e-47

73.77

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        M +F KL  ALL +S++S GNCQCFLNN+ ISQ M+GFQIHGMTEWKVTI+NNC+CSQS++KLDC+GF TT SIDPSILAISD+ECLVNNG PIFNS+PI
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TF YA+ P+F F P+SSQI+CS
Subjt:  TFTYARDPQFIFNPISSQIACS

A0A1S3B1L8 protein TAPETUM DETERMINANT 1-like

2.6e-46

73.77

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA+  KL  ALL +S +S GNCQC LNN+TISQ+M+GFQIHGMTEW VTI+NNC+CSQS++KLDC+GF TT SIDPSIL+ISD ECLVNNG PIFNSKPI
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TF YA+ P+F F PISSQI+CS
Subjt:  TFTYARDPQFIFNPISSQIACS

A0A5D3CMA8 Protein TAPETUM DETERMINANT 1-like

2.6e-46

73.77

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA+  KL  ALL +S +S GNCQC LNN+TISQ+M+GFQIHGMTEW VTI+NNC+CSQS++KLDC+GF TT SIDPSIL+ISD ECLVNNG PIFNSKPI
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TF YA+ P+F F PISSQI+CS
Subjt:  TFTYARDPQFIFNPISSQIACS

A0A6J1HGA0 uncharacterized protein At1g05835-like

5.0e-50

81.97

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA  AKLF ALLFVS LSK N QCFL+N+TI Q M+GFQIHGMTEW  T+SNNC+CSQSEVKLDCRGFQTTKSIDP ILAI+DTECLVNNGLPIFNS PI
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TFTYA++PQF F PISSQIACS
Subjt:  TFTYARDPQFIFNPISSQIACS

A0A6J1KP98 protein TAPETUM DETERMINANT 1-like

4.0e-47

77.87

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA FAKLF ALLFVS+L KGNCQC  N++ I Q MSGFQIHGMTEW VTISN C+CSQSEVKLDCRGFQTTKSIDPS+LA++D+ECLVNNGLPIF S  I
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQIACS
        TFTYA DP+F F  ISSQI CS
Subjt:  TFTYARDPQFIFNPISSQIACS

SwissProt top hits

e value

%identity

Alignment

A8MS78 Uncharacterized protein At1g05835

2.1e-05

30.86

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Query:  EWKVTISNNC-VCSQSEVKLDCRGFQTTKSIDPS---ILAISDTECLVNNGLPIFNSKPITFTYARDPQFIFNPISSQIAC
        +++V + N C +C    ++L C+GF  +  +DP+   +L+ S   C+VN+GLP+   + ++F Y+   QF   P+S    C
Subjt:  EWKVTISNNC-VCSQSEVKLDCRGFQTTKSIDPS---ILAISDTECLVNNGLPIFNSKPITFTYARDPQFIFNPISSQIAC

Arabidopsis top hits

e value

%identity

Alignment

AT1G05835.1 PHD finger protein

1.5e-06

30.86

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Query:  EWKVTISNNC-VCSQSEVKLDCRGFQTTKSIDPS---ILAISDTECLVNNGLPIFNSKPITFTYARDPQFIFNPISSQIAC
        +++V + N C +C    ++L C+GF  +  +DP+   +L+ S   C+VN+GLP+   + ++F Y+   QF   P+S    C
Subjt:  EWKVTISNNC-VCSQSEVKLDCRGFQTTKSIDPS---ILAISDTECLVNNGLPIFNSKPITFTYARDPQFIFNPISSQIAC

AT4G32090.1 Beta-1,3-N-Acetylglucosaminyltransferase family protein

2.7e-16

36.13

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Query:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI
        MA   K F  +L +S++S G C C    + I    +G +I G  EWKVT+ N C C Q  V L C GF   K + P +L      CL+  G  +      
Subjt:  MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPI

Query:  TFTYARDPQFIFNPISSQI
         FTYA  P +IF P+ S++
Subjt:  TFTYARDPQFIFNPISSQI

Sequences

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CDS sequence

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ATGGCTCTGTTCGCCAAGCTTTTCACTGCACTTCTCTTCGTTTCTATCCTATCCAAAGGAAATTGCCAATGTTTTTTGAACAACTTAACAATCAGTCAGAGGATGAGTGG
ATTTCAGATCCATGGAATGACAGAATGGAAAGTGACAATAAGCAACAACTGCGTGTGTTCTCAGTCAGAAGTGAAGCTCGATTGCAGAGGATTTCAAACTACAAAAAGCA
TTGATCCCTCCATTTTAGCTATTTCTGACACTGAGTGTTTGGTCAACAATGGGCTCCCAATTTTCAATTCCAAGCCCATCACCTTCACTTATGCACGAGATCCTCAGTTC
ATTTTCAACCCTATCTCTTCCCAGATTGCTTGTTCTTAA

mRNA sequence

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Protein sequence

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MALFAKLFTALLFVSILSKGNCQCFLNNLTISQRMSGFQIHGMTEWKVTISNNCVCSQSEVKLDCRGFQTTKSIDPSILAISDTECLVNNGLPIFNSKPITFTYARDPQF
IFNPISSQIACS

Tan0005864 (gene) of Snake gourd v1 genome