| GenBank top hits | e value | %identity | Alignment |
|---|
| GAU19483.1 hypothetical protein TSUD_77270 [Trifolium subterraneum] | 3.8e-142 | 42.94 | Show/hide |
Query: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
++KL+R N+ LWK+L LP++R KL+ ++LGT+ CP F++ SS+S+ + N + W DQ L+ W+ NSM +E+ATQ++ C T+
Subjt: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
Query: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
K LWD Q L G +R++ YL F RKG MKM +YL MK D L A +PVST LI Q L GLD EYNPVVV + + +SW D Q L FE
Subjt: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
Query: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
R+E N N + + NA+ N+A R + S NN R +N+ RG GRGRG + N CQVCG H A+ C++RF+K YS
Subjt: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
Query: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
S N + ++QG N FLA+ ++ D WY +SGAS+HVT + E+ G +S++VGNG + I TG+S L
Subjt: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
Query: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
S L L ++L PN+ KNL+S+S+LA DN+I +EF + C VKDK TGK +LKG LK+GLY L+ T K N AF
Subjt: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
Query: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
K WHR LGHP+ K+LD V+ SC + V ++ FC +CQYGK H LPF S S A + ELV++DVWGPAP++++SGF+YYV F+DD+SRF W
Subjt: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
Query: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
+YPLKQKS+T AF F + + QFN I+ Q D G E+ V +L + GI+ R SCPYTSQQNGRAERKHRH+ E LTLLAQA MPL +WW
Subjt: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| PNX76291.1 gag/pol polyprotein - maize retrotransposon Hopscotch, partial [Trifolium pratense] | 1.7e-142 | 42.86 | Show/hide |
Query: NSPPLNQLLNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMI
NS N L + V ++KL+R N+ LW+++ LPI+R +L+ ++LG K CP F++ A +S+ NP +E W DQ L+ WL NSM
Subjt: NSPPLNQLLNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMI
Query: SEVATQVMGCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEI
+ATQ++ C T+ LWD Q L G +R++ YL F +RKG MKM +YL MK AD L A +P+ST LI Q L GLD EYNPVVV + + +
Subjt: SEVATQVMGCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEI
Query: SWADAQNDLFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTA
SW D Q L FE R+E Q NS++ N ++N N +S + + S NN+ SNNN RG N RG GRG + + CQVCG H A
Subjt: SWADAQNDLFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTA
Query: LVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNG
+ C+ RF+K YS S N + ++QG N FLA+ +I D WY +SGAS+HVT N E+ G +S+IVGNG
Subjt: LVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNG
Query: SQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESK
+ I TG+S L S L L ++L P + KNL+S+S+LA DN+I +EF + C VKDK TGK +L+G LK+GLY L+
Subjt: SQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESK
Query: MYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRY
K++S S+ K WHR LGHP+ K+LD V++SCN+ + +++ FC +CQYGK H LPF S S A + ELV++DVWGPAP++S+SGF+Y
Subjt: MYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRY
Query: YVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQAS
YV F+DD++RF W+YPLKQKSDT +AF F MV+ QF+ I++ Q D G E+ V + + GI+ R SCPYTSQQNGRAERKHRH+ E LTLLAQA
Subjt: YVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQAS
Query: MPLVFWW
MPL +WW
Subjt: MPLVFWW
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| PNX78574.1 retrovirus-related Pol polyprotein from transposon TNT 1-94 [Trifolium pratense] | 1.4e-136 | 41.79 | Show/hide |
Query: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
++ L+R NF LWK+L LPI+R +L+ ++LGTK CP F++ A G INP + W DQ ++ WL N+M + A+Q++ C T+
Subjt: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
Query: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
K LW+ Q L +R+ YL F +RKG KM +YL MK AD L A SP++ LI Q L GLD +YNP+VV + + +SW D Q L FE
Subjt: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
Query: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
RL+ N+ N + NA+ N+A N + N N+ S RG + + GRG+G SN+ ICQVC K GHTA+ C +R++K Y+
Subjt: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
Query: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
S+ N + + N FLA+ D WY +SGAS+HVT E G +S+IVGNG++ I +G+S L
Subjt: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
Query: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
NL L +VL P + KNL+S+S+L DN+I +EF + C VKDK TGK LL+G LK+GLY L+N S+ K+ V SV
Subjt: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
Query: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
K WHR LGHPS +LD V++ CN+ +++ FC +CQ GKSH LPF S S A + EL+++DVWGPAP+ S SGF+YYV F+DD SRF W
Subjt: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
Query: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
+YPLKQKSDT +AF F MV+ QFN I+ Q D G EF V ++ + GIK R SCPYTSQQNGRAERKHRH+ E LTLLAQA+M L +WW
Subjt: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| PNX94503.1 putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense] | 2.5e-138 | 41.49 | Show/hide |
Query: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
L ++KL+R NF LWK+L LP++R K + ++LGTK CP F++ S ++T INP Y+ W DQ L+ WL NSM ++ATQV+
Subjt: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
Query: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
C T+K LWD Q L G +R+ YL F + K MKM +YL MK AD L A SP+S+ L+ Q L GLD EYNPVVV + + ISW D Q
Subjt: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
Query: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
L FE RL+ N N + NAS N A + + + R +N+ RG GRGR R + RPICQ+CGK GHTA CY RF+
Subjt: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
Query: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
K Y ++ N G + S+ F+A+P D WY +SGAS+HVT G L + E G +S++VGNG + I +
Subjt: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
Query: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
G++ L ++ L+NVL P + KNL+S+S+L DN+ +EF + YC VKDK TGK LLKG LK+GLY L+ ++ E K+
Subjt: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
Query: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
S+ K WHR LGHP+ K+L+ V++ N+ + +++ FC +CQ+GK H LPF S S A + +L+++DVWGPAP+LS S F+YYV FLDD+
Subjt: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
Query: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
SRF W++PLKQKS+T +AF F +V+ QFN I+ + D G E+ V + GI+ + SCPYTSQQNGRAERKHRH+ E LTLLAQA MPL +WW
Subjt: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| PNY01489.1 copia-like polyprotein, partial [Trifolium pratense] | 1.4e-136 | 41.77 | Show/hide |
Query: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
L + ++KL+R N+ LWK+L LP++R K + ++LGTK CP F++ S++ + +NP ++ WM DQ L+ WL NSM ++ATQ++
Subjt: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
Query: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
C T+K LWD Q L G +++ YL F +RKG MKM EYL MK +D L + SP+S L+ Q L GLD EYNPVVV + + +SW D Q
Subjt: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
Query: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
L FE RL+ N N + NAS N A +++ + + +S N+ RS N RG GRG+G SN + CQVC GHTA+ C RF+
Subjt: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
Query: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
+ Y T +N ++ ++QG + + FVASP D WY +SGAS+HVT E+ G +S++VGNG + I +
Subjt: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
Query: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
G++ L + L L +VL P + KNL+S+S+L DN+I++EF C VKDK TG+ LLKG LK+GLY L+ D+S SN K+ V
Subjt: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
Query: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
SV K WHR LGHP+ K+L+ V++ CN+ + +++ FC +CQ+GK H LPF S S + L++SDVWGPAP+LS SGF+YYV F+DD+
Subjt: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
Query: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
SRF W++PLKQKSDT +AF F + + QFN I+ Q D G E+ V ++ + GI+ R SCPYTSQQNGRAERKHRH+VE LTLLAQA MPL +WW
Subjt: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A2K3LCM1 Gag/pol polyprotein-maize retrotransposon Hopscotch (Fragment) | 8.2e-143 | 42.86 | Show/hide |
Query: NSPPLNQLLNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMI
NS N L + V ++KL+R N+ LW+++ LPI+R +L+ ++LG K CP F++ A +S+ NP +E W DQ L+ WL NSM
Subjt: NSPPLNQLLNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMI
Query: SEVATQVMGCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEI
+ATQ++ C T+ LWD Q L G +R++ YL F +RKG MKM +YL MK AD L A +P+ST LI Q L GLD EYNPVVV + + +
Subjt: SEVATQVMGCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEI
Query: SWADAQNDLFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTA
SW D Q L FE R+E Q NS++ N ++N N +S + + S NN+ SNNN RG N RG GRG + + CQVCG H A
Subjt: SWADAQNDLFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTA
Query: LVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNG
+ C+ RF+K YS S N + ++QG N FLA+ +I D WY +SGAS+HVT N E+ G +S+IVGNG
Subjt: LVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNG
Query: SQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESK
+ I TG+S L S L L ++L P + KNL+S+S+LA DN+I +EF + C VKDK TGK +L+G LK+GLY L+
Subjt: SQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESK
Query: MYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRY
K++S S+ K WHR LGHP+ K+LD V++SCN+ + +++ FC +CQYGK H LPF S S A + ELV++DVWGPAP++S+SGF+Y
Subjt: MYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRY
Query: YVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQAS
YV F+DD++RF W+YPLKQKSDT +AF F MV+ QF+ I++ Q D G E+ V + + GI+ R SCPYTSQQNGRAERKHRH+ E LTLLAQA
Subjt: YVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQAS
Query: MPLVFWW
MPL +WW
Subjt: MPLVFWW
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| A0A2K3LJ49 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.7e-137 | 41.79 | Show/hide |
Query: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
++ L+R NF LWK+L LPI+R +L+ ++LGTK CP F++ A G INP + W DQ ++ WL N+M + A+Q++ C T+
Subjt: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
Query: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
K LW+ Q L +R+ YL F +RKG KM +YL MK AD L A SP++ LI Q L GLD +YNP+VV + + +SW D Q L FE
Subjt: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
Query: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
RL+ N+ N + NA+ N+A N + N N+ S RG + + GRG+G SN+ ICQVC K GHTA+ C +R++K Y+
Subjt: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
Query: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
S+ N + + N FLA+ D WY +SGAS+HVT E G +S+IVGNG++ I +G+S L
Subjt: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
Query: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
NL L +VL P + KNL+S+S+L DN+I +EF + C VKDK TGK LL+G LK+GLY L+N S+ K+ V SV
Subjt: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
Query: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
K WHR LGHPS +LD V++ CN+ +++ FC +CQ GKSH LPF S S A + EL+++DVWGPAP+ S SGF+YYV F+DD SRF W
Subjt: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
Query: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
+YPLKQKSDT +AF F MV+ QFN I+ Q D G EF V ++ + GIK R SCPYTSQQNGRAERKHRH+ E LTLLAQA+M L +WW
Subjt: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| A0A2K3MUJ9 Putative retrotransposon Ty1-copia subclass protein (Fragment) | 1.2e-138 | 41.49 | Show/hide |
Query: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
L ++KL+R NF LWK+L LP++R K + ++LGTK CP F++ S ++T INP Y+ W DQ L+ WL NSM ++ATQV+
Subjt: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
Query: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
C T+K LWD Q L G +R+ YL F + K MKM +YL MK AD L A SP+S+ L+ Q L GLD EYNPVVV + + ISW D Q
Subjt: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
Query: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
L FE RL+ N N + NAS N A + + + R +N+ RG GRGR R + RPICQ+CGK GHTA CY RF+
Subjt: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
Query: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
K Y ++ N G + S+ F+A+P D WY +SGAS+HVT G L + E G +S++VGNG + I +
Subjt: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
Query: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
G++ L ++ L+NVL P + KNL+S+S+L DN+ +EF + YC VKDK TGK LLKG LK+GLY L+ ++ E K+
Subjt: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
Query: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
S+ K WHR LGHP+ K+L+ V++ N+ + +++ FC +CQ+GK H LPF S S A + +L+++DVWGPAP+LS S F+YYV FLDD+
Subjt: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
Query: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
SRF W++PLKQKS+T +AF F +V+ QFN I+ + D G E+ V + GI+ + SCPYTSQQNGRAERKHRH+ E LTLLAQA MPL +WW
Subjt: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| A0A2K3NEN7 Copia-like polyprotein (Fragment) | 6.7e-137 | 41.77 | Show/hide |
Query: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
L + ++KL+R N+ LWK+L LP++R K + ++LGTK CP F++ S++ + +NP ++ WM DQ L+ WL NSM ++ATQ++
Subjt: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
Query: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
C T+K LWD Q L G +++ YL F +RKG MKM EYL MK +D L + SP+S L+ Q L GLD EYNPVVV + + +SW D Q
Subjt: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
Query: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
L FE RL+ N N + NAS N A +++ + + +S N+ RS N RG GRG+G SN + CQVC GHTA+ C RF+
Subjt: LFMFEKRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFN
Query: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
+ Y T +N ++ ++QG + + FVASP D WY +SGAS+HVT E+ G +S++VGNG + I +
Subjt: KEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFT
Query: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
G++ L + L L +VL P + KNL+S+S+L DN+I++EF C VKDK TG+ LLKG LK+GLY L+ D+S SN K+ V
Subjt: GNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVA
Query: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
SV K WHR LGHP+ K+L+ V++ CN+ + +++ FC +CQ+GK H LPF S S + L++SDVWGPAP+LS SGF+YYV F+DD+
Subjt: FSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDY
Query: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
SRF W++PLKQKSDT +AF F + + QFN I+ Q D G E+ V ++ + GI+ R SCPYTSQQNGRAERKHRH+VE LTLLAQA MPL +WW
Subjt: SRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| A0A2Z6MBG6 Integrase catalytic domain-containing protein | 1.8e-142 | 42.94 | Show/hide |
Query: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
++KL+R N+ LWK+L LP++R KL+ ++LGT+ CP F++ SS+S+ + N + W DQ L+ W+ NSM +E+ATQ++ C T+
Subjt: TIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVMGCNTA
Query: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
K LWD Q L G +R++ YL F RKG MKM +YL MK D L A +PVST LI Q L GLD EYNPVVV + + +SW D Q L FE
Subjt: KDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQNDLFMFE
Query: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
R+E N N + + NA+ N+A R + S NN R +N+ RG GRGRG + N CQVCG H A+ C++RF+K YS
Subjt: KRLEFQNTQRNSVSFSHNASVNMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSP
Query: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
S N + ++QG N FLA+ ++ D WY +SGAS+HVT + E+ G +S++VGNG + I TG+S L
Subjt: STNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL
Query: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
S L L ++L PN+ KNL+S+S+LA DN+I +EF + C VKDK TGK +LKG LK+GLY L+ T K N AF
Subjt: TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH
Query: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
K WHR LGHP+ K+LD V+ SC + V ++ FC +CQYGK H LPF S S A + ELV++DVWGPAP++++SGF+YYV F+DD+SRF W
Subjt: KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVW
Query: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
+YPLKQKS+T AF F + + QFN I+ Q D G E+ V +L + GI+ R SCPYTSQQNGRAERKHRH+ E LTLLAQA MPL +WW
Subjt: VYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFWW
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| SwissProt top hits | e value | %identity | Alignment |
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.8e-33 | 27.89 | Show/hide |
Query: NYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFL
+Y RS+NN + G S+ R + R N C C + GH C N + S +N NT++ NV + L
Subjt: NYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPICQVCGKIGHTALVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFL
Query: ATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL-TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDT
+ PE+ W ++ ASHH T +L G ++ +GN S S I G+ C+ T+ L L++V P++ NL IS +A D D Y +
Subjt: ATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQSPITFTGNSCL-TSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDT
Query: YCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH-----KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVN
K L +G +A + + +Y+ N+ +C ++++ WH+ +GH S K L + + +
Subjt: YCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYKNNSVAFSVCH-----KPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVN
Query: EEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDN
C+ C +GK H + F S R +LVYSDV GP + S G +Y+V F+DD SR +WVY LK K FQ F A+V+ + ++ +SDN
Subjt: EEHYFCNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDN
Query: GTEFL--RVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFW
G E+ + CS GI+ + P T Q NG AER +R +VE ++L A +P FW
Subjt: GTEFL--RVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASMPLVFW
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| Q03494 Transposon Ty2-DR2 Gag-Pol polyprotein | 1.8e-22 | 26.97 | Show/hide |
Query: SIIVGNGSQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEG-LYCLANTLVKPVDISQP
+I+ PI GN L PN+A +L+S+S LA N +T + + GT +L +K G Y L+ + P IS+
Subjt: SIIVGNGSQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEG-LYCLANTLVKPVDISQP
Query: ILSSNESKMYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVL-------VNEEHYFCNSCQYGKS----HALPFSISESRASKKFEL
+++ + K+ SV NK HR LGH + + + ++ + L N Y C C GKS H + + + F+
Subjt: ILSSNESKMYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVL-------VNEEHYFCNSCQYGKS----HALPFSISESRASKKFEL
Query: VYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTG--NAFQHFLAMVQTQFNGNIQSFQSDNGTEFLR--VHQLCSQLGIKSRYSCPYTSQQ
+++D++GP L S Y++ F D+ +RF WVYPL + + N F LA ++ QFN + Q D G+E+ +H+ + GI + Y+ S+
Subjt: VYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTG--NAFQHFLAMVQTQFNGNIQSFQSDNGTEFLR--VHQLCSQLGIKSRYSCPYTSQQ
Query: NGRAERKHRHLVETCLTLLAQASMPLVFWW
+G AER +R L+ C TLL + +P W+
Subjt: NGRAERKHRHLVETCLTLLAQASMPLVFWW
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| Q12337 Transposon Ty2-GR1 Gag-Pol polyprotein | 1.8e-22 | 26.97 | Show/hide |
Query: SIIVGNGSQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEG-LYCLANTLVKPVDISQP
+I+ PI GN L PN+A +L+S+S LA N +T + + GT +L +K G Y L+ + P IS+
Subjt: SIIVGNGSQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEG-LYCLANTLVKPVDISQP
Query: ILSSNESKMYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVL-------VNEEHYFCNSCQYGKS----HALPFSISESRASKKFEL
+++ + K+ SV NK HR LGH + + + ++ + L N Y C C GKS H + + + F+
Subjt: ILSSNESKMYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVL-------VNEEHYFCNSCQYGKS----HALPFSISESRASKKFEL
Query: VYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTG--NAFQHFLAMVQTQFNGNIQSFQSDNGTEFLR--VHQLCSQLGIKSRYSCPYTSQQ
+++D++GP L S Y++ F D+ +RF WVYPL + + N F LA ++ QFN + Q D G+E+ +H+ + GI + Y+ S+
Subjt: VYSDVWGPAPVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTG--NAFQHFLAMVQTQFNGNIQSFQSDNGTEFLR--VHQLCSQLGIKSRYSCPYTSQQ
Query: NGRAERKHRHLVETCLTLLAQASMPLVFWW
+G AER +R L+ C TLL + +P W+
Subjt: NGRAERKHRHLVETCLTLLAQASMPLVFWW
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.4e-85 | 32.54 | Show/hide |
Query: NSPPLNQLLNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMI
N+ LN ++ VT KL N+L+W + Y+L L G+ PP A+ +++ +NP Y W D+L+ S + ++
Subjt: NSPPLNQLLNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMI
Query: SEVATQVMGCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEI
V V TA +W+ ++ ++ S L +Q KG + +Y++ + D L P+ + +VL L EEY PV+ I K
Subjt: SEVATQVMGCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEI
Query: SWADAQNDLFMFEKRLEFQNTQRNSVSFSH--NASVNMAINRGTQSQRQQQQNYSPNNY-NRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPI---CQVCG
D L +RL ++ +VS + + N +R T + N Y NR+NNNNS+ P + N+ ++P CQ+CG
Subjt: SWADAQNDLFMFEKRLEFQNTQRNSVSFSH--NASVNMAINRGTQSQRQQQQNYSPNNY-NRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPI---CQVCG
Query: KIGHTALVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNP--FLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGM
GH+A C S Q+ S N Q Q P SP TP P LA +W +SGA+HH+T+DF NL+ Y G
Subjt: KIGHTALVCYNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNP--FLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGM
Query: DSIIVGNGSQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQP
D ++V +GS PI+ TG++ L++ L L N+L PN+ KNLIS+ RL N + +EF VKD TG LL+G K+ LY P
Subjt: DSIIVGNGSQSPITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQP
Query: ILSSNESKMYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYF--CNSCQYGKSHALPFSISESRASKKFELVYSDVWGPA
I SS ++ + S +K T + WH LGHP+ IL+SVI + +L VL N H F C+ C KS+ +PFS S +++ E +YSDVW +
Subjt: ILSSNESKMYKNNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYF--CNSCQYGKSHALPFSISESRASKKFELVYSDVWGPA
Query: PVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVE
P+LS +RYYV+F+D ++R+ W+YPLKQKS F F +++ +F I +F SDNG EF+ + + SQ GI S P+T + NG +ERKHRH+VE
Subjt: PVLSTSGFRYYVLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVE
Query: TCLTLLAQASMPLVFW
T LTLL+ AS+P +W
Subjt: TCLTLLAQASMPLVFW
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-83 | 32.2 | Show/hide |
Query: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
+N KL N+L+W + Y+L L G+ P PP A+ +++ +NP Y W D+L+ S + ++ V V
Subjt: LNQVTTIKLERGNFLLWKNLALPILRSYKLESHLLGTKPCPPMFLSQARTEGNVTVEGASFSSESTTSINPLYEAWMTVDQLLISWLYNSMISEVATQVM
Query: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
TA +W+ ++ ++ A Y G++ ++ D L P+ + +VL L ++Y PV+ I K D
Subjt: GCNTAKDLWDVIQLLFGVQSRAEEDYLCQTFQQSRKGNMKMSEYLRIMKCHADNLGQARSPVSTRSLISQVLLGLDEEYNPVVVGIQGKYEISWADAQND
Query: LFMFEKRLEFQNTQRNSVSFSHNASV--NMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPI---CQVCGKIGHTALVC
L +RL + ++ +++ + + N+ +R T + R Q NYN NNNN P+S G R N +P CQ+C GH+A C
Subjt: LFMFEKRLEFQNTQRNSVSFSHNASV--NMAINRGTQSQRQQQQNYSPNNYNRSNNNNSQRGGTPNSRGRGRGRGYNSNNRPI---CQVCGKIGHTALVC
Query: YNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQS
P +Q + + QQ P T N+ V SP +N W +SGA+HH+T+DF NL+ Y G D +++ +GS
Subjt: YNRFNKEYSPSTNQNRQSQPNQQGFGPNTSSSSFQAPNVFVASPNTPSNPFLATPETIGDPSWYANSGASHHVTTDFGNLANPIEYGGMDSIIVGNGSQS
Query: PITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYK
PIT TG++ L + +L L VL PN+ KNLIS+ RL N + +EF VKD TG LL+G K+ LY PI SS M+
Subjt: PITFTGNSCLTSGKYNLRLQNVLCAPNMAKNLISISRLAQDNDIYIEFHDTYCVVKDKGTGKQLLKGDLKEGLYCLANTLVKPVDISQPILSSNESKMYK
Query: NNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYF--CNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYY
S C +K T + WH LGHPS IL+SVI + +LPVL N H C+ C KSH +PFS S +SK E +YSDVW +P+LS +RYY
Subjt: NNSVAFSVCHKPNKVTKTFWHRHLGHPSTKILDSVIRSCNLPVLVNEEHYF--CNSCQYGKSHALPFSISESRASKKFELVYSDVWGPAPVLSTSGFRYY
Query: VLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASM
V+F+D ++R+ W+YPLKQKS + F F ++V+ +F I + SDNG EF+ + SQ GI S P+T + NG +ERKHRH+VE LTLL+ AS+
Subjt: VLFLDDYSRFVWVYPLKQKSDTGNAFQHFLAMVQTQFNGNIQSFQSDNGTEFLRVHQLCSQLGIKSRYSCPYTSQQNGRAERKHRHLVETCLTLLAQASM
Query: PLVFW
P +W
Subjt: PLVFW
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