CuGenDBv2

Gene ID	Tan0005876
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Protein Ycf2
Genome location	Contig00124:120291..121626
RNA-Seq Expression	Tan0005876
Synteny	Tan0005876
Gene Ontology terms	GO:0009536 - plastid (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

QJS52308.1 hypothetical protein RF2 [Indofevillea khasiana]

1.1e-138

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

QZL38725.1 Ycf2 protein [Citrullus ecirrhosus]

1.1e-138

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

YP_009420838.1 Ycf2 [Citrullus colocynthis]

1.1e-138

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

YP_009752286.1 Ycf2 protein [Trichosanthes baviensis]

1.1e-138

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

YP_010131137.1 hypothetical protein RF2 [Benincasa hispida]

1.1e-138

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

TrEMBL top hits

e value

%identity

Alignment

A0A343F2F1 Protein Ycf2

5.4e-139

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

A0A6H0ET42 Protein Ycf2

5.4e-139

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

A0A6M3RUH1 Protein Ycf2

5.4e-139

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

A0A7G9IT80 Protein Ycf2

5.4e-139

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

A0A7T3QNV9 Uncharacterized protein

5.4e-139

63.57

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        GGS LYKWYFELGTSMKKLT LLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DM+ NGSCS VDQRFLYEQYESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHFGLLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

SwissProt top hits

e value

%identity

Alignment

A0ZZ78 Protein Ycf2

1.5e-133

61.49

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSIT+GSN RDLVALTNEALSISITQKKSIIDTN IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAV QNVLLSNC +D +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---
        G S LYKWYFELGTSMKKLT LLYLLSCSAGSV QDLWSLPGPDEKNGITSYG VENDSDLVHGL        G  R                 RS+   
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---

Query:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR--------------SF
           MM NGSCS VDQR LYE+YESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY  G F   R              +F
Subjt:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR--------------SF

Query:  MMK-RMSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS
        +    M ++   RSS                                                                +NTQEKHF LLIHRQ  LRT+
Subjt:  MMK-RMSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLS--NGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLS  NGFFRSNTPSESYQ L NLF   G LLDQMTK   ++R
Subjt:  RSLS--NGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

B1A978 Protein Ycf2

5.4e-136

62.44

Show/hide

Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GF SITMGSN RDLVALTNEALSISITQKKSIIDTN IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNC ID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---
        G S LYKWYFELGTSMKKLT LLYLLSCSAGSV QDLWSLPGPDEKNGITSYG VENDSDLVHGL        G  R                 RS+   
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---

Query:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
           MM NGSCS VDQRFLYE+YESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY    F   R                
Subjt:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEKHF LLIHRQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

Q09MB4 Protein Ycf2

7.6e-138

62.44

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Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSN RDLVALTNEALSISITQKKSIIDTN IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNC ID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        G S LYKWYFELGTSMKKLT LLYLLSCSAGSV QDLWSLPGPDEKNGITS GLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR--------------SF
          DMM  GSCS VDQRFLYE+YESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPNELGFPY  G F   R               F
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR--------------SF

Query:  MMKR-MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS
        +  R M ++   RSS                                                                +NTQEKHF LLIHRQ  LRT+
Subjt:  MMKR-MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

Q09WV7 Protein Ycf2

5.1e-134

61.31

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Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSIIDTN+IRSA HRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        G S LYKWYFELGTSMKKLT LLYLLSCSAGSV QDLWSLP  DEKNGITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------
          DMM NGSCS VDQRFLYEQY+SEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIE PNELGFPY    F   R                
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASR----------------

Query:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS
                                           F+ K   F                K ++ S              +NTQEK+F LLI+RQ  LRT+
Subjt:  ----------------------------------SFMMKRMSF----------------KRMIRSS------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L  LF   GTLLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

Q49KT6 Protein Ycf2

5.4e-136

61.31

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Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GFGSITMGSNVRDLVALTNEALSISITQKKSI+DTN IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNC ID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR
        G S LYKWYFELGTSMKKLT LLYLLSCSAGS+ QDLWSLPGPDEKN ITSYGLVENDSDLVHGL                                 R 
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF------------------------------GRRR

Query:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASRSFMMKR----------
          DMM NGSCS VDQRFLYE+YESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRPWGFLFDCIERPN LGFPY    F   R    ++          
Subjt:  RSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASRSFMMKR----------

Query:  -----MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS
             M ++   RSS                                                                +NTQEKHF LLIHRQ  LRT+
Subjt:  -----MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNTPSESYQ L NLF   G LLDQMTK   ++R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

Arabidopsis top hits

e value

%identity

Alignment

ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core

3.2e-131

60.63

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Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GF SITMGS+ RDLVALTNEALSISITQKKSIIDTN IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVL+SNC ID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---
        G S LYKWYFELGTSMKK T LLYLLSCSAGSV QDLWSLP PDEKN ITSYG VENDSDLVHGL        G  R                 RS+   
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---

Query:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASRSFMMKR----------
           MM +GSCS VDQRFLYE+YESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRP GFLFDCIERPNELGFPY  G F   R    ++          
Subjt:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASRSFMMKR----------

Query:  -----MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS
             M ++R  RSS                                                                +NTQEKHF LLI RQ  LRT+
Subjt:  -----MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNT SESYQ L NLF   GTLLD+MTK   K+R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core

3.2e-131

60.63

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Query:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE
        MFHT GF SITMGS+ RDLVALTNEALSISITQKKSIIDTN IRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVL+SNC ID +S YMKKKSCNE
Subjt:  MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNE

Query:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---
        G S LYKWYFELGTSMKK T LLYLLSCSAGSV QDLWSLP PDEKN ITSYG VENDSDLVHGL        G  R                 RS+   
Subjt:  GGSDLYKWYFELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLF-------GRRR-----------------RSD---

Query:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASRSFMMKR----------
           MM +GSCS VDQRFLYE+YESEFEEGEGEGVLDPQ +E DLFNHIVWAPRIWRP GFLFDCIERPNELGFPY  G F   R    ++          
Subjt:  ---MMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVWAPRIWRPWGFLFDCIERPNELGFPYLKGHFGASRSFMMKR----------

Query:  -----MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS
             M ++R  RSS                                                                +NTQEKHF LLI RQ  LRT+
Subjt:  -----MSFKRMIRSS---------------------------------------------------------------CRNTQEKHFGLLIHRQFRLRTS

Query:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR
         SLSNGFFRSNT SESYQ L NLF   GTLLD+MTK   K+R
Subjt:  RSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPYQKRR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCCATACTAAAGGATTCGGTTCCATAACCATGGGTTCCAATGTACGAGATCTTGTAGCACTTACCAATGAGGCCCTATCGATTAGTATTACGCAGAAGAAATCAAT
TATAGACACTAATCTAATTCGATCTGCTCTTCATAGACAAACTTGGGATTTGCGATCCCAGGTAAGATCGGTTCAGGATCATGGGATCCTTTTCTATCAGATAGGAAGGG
CTGTTGCACAAAATGTACTTCTAAGTAATTGCTCCATAGATCAATTATCGAGATATATGAAGAAGAAATCATGTAACGAAGGGGGTTCTGATTTGTACAAATGGTACTTC
GAACTTGGAACGAGCATGAAGAAATTAACGAGACTTCTTTATCTTTTGAGTTGTTCTGCCGGATCGGTCGTTCAAGACCTTTGGTCTCTACCCGGACCCGATGAAAAAAA
TGGGATCACTTCTTATGGACTCGTTGAGAATGATTCTGATCTAGTTCATGGCCTATTCGGCCGTAGAAGGCGCTCTGATATGATGATAAATGGATCTTGTTCGAGAGTTG
ATCAGAGATTTCTCTATGAACAATACGAATCGGAGTTTGAAGAAGGGGAAGGAGAAGGAGTCCTCGACCCGCAACATCTCGAGGTGGATTTATTCAATCACATAGTTTGG
GCTCCTAGAATATGGCGCCCTTGGGGCTTTCTATTTGATTGTATCGAAAGGCCCAATGAATTGGGATTTCCCTATTTAAAAGGTCATTTCGGGGCAAGCAGATCATTTAT
GATGAAGAGGATGAGCTTCAAGAGAATGATTCGGAGTTCTTGCAGAAATACGCAAGAAAAGCACTTCGGATTGTTGATTCATCGCCAGTTCAGGCTTAGAACCTCTCGTT
CATTATCTAATGGATTTTTCCGTTCTAATACTCCATCCGAGAGTTATCAAGATTTATATAATCTGTTCCGAGATAAGGGAACGCTATTGGATCAAATGACAAAGCCCTAT
CAAAAGAGGAGAAAAAGTTGA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MFHTKGFGSITMGSNVRDLVALTNEALSISITQKKSIIDTNLIRSALHRQTWDLRSQVRSVQDHGILFYQIGRAVAQNVLLSNCSIDQLSRYMKKKSCNEGGSDLYKWYF
ELGTSMKKLTRLLYLLSCSAGSVVQDLWSLPGPDEKNGITSYGLVENDSDLVHGLFGRRRRSDMMINGSCSRVDQRFLYEQYESEFEEGEGEGVLDPQHLEVDLFNHIVW
APRIWRPWGFLFDCIERPNELGFPYLKGHFGASRSFMMKRMSFKRMIRSSCRNTQEKHFGLLIHRQFRLRTSRSLSNGFFRSNTPSESYQDLYNLFRDKGTLLDQMTKPY
QKRRKS

Tan0005876 (gene) of Snake gourd v1 genome