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Tan0005913 (gene) of Snake gourd v1 genome

Gene IDTan0005913
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein NIM1-INTERACTING 1
Genome locationLG06:5285338..5286095
RNA-Seq ExpressionTan0005913
SyntenyTan0005913
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593261.1 hypothetical protein SDJN03_12737, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3364.54Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA
        MEKQSL+   +RVA AAVDGEEE  EEMKME FFALVRNFKEMRD+RRKELMIGC+   A     +++KMKT  VENRS WIPRFEREDFDE+FQVRGPA
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA

Query:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL
                  KEE  A A +   K  KVK+ ED LDLNL+L
Subjt:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL

KAG7025612.1 hypothetical protein SDJN02_12109, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-3565.25Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA
        MEKQSL+   +RVA AAVDGEEEE+EEMKME FFALVRNFKEMRD+RRKELMIGC+   A     +++KMKT  VENRS WIPRFEREDFDE+FQVRGPA
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA

Query:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL
                  KEE  A A     K  KVK+ ED LDLNL+L
Subjt:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL

XP_022960173.1 protein NIM1-INTERACTING 1 [Cucurbita moschata]3.9e-3263.45Show/hide
Query:  MEKQSLQPPRERV----AIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQV
        MEKQSL+   +RV    A AAVDGEEE  EEMKME FFALVRNFKEMRD+RRKELMIGCD   A     +++KMKT  VENRS WIPRFEREDFDE+FQV
Subjt:  MEKQSLQPPRERV----AIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQV

Query:  RGPAVVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL
        RGPA          KEE  A A     K  KVK+ ED LDLNL+L
Subjt:  RGPAVVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL

XP_023514605.1 protein NIM1-INTERACTING 1 [Cucurbita pepo subsp. pepo]2.9e-3566.67Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA
        MEKQSL+P  +RVA+AAVDGEEEE EEMKME FFALVRNFKEMRD+RRKELMIGCD   A     +++KMKT  VENRS WIPRFEREDFDE+FQ+RGPA
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA

Query:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL
                  KEE  A A  KK    KVK+ ED LDLNL+L
Subjt:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL

XP_038898983.1 protein NIM1-INTERACTING 1-like [Benincasa hispida]1.2e-3365.54Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTT--RVENRSTWIPRFEREDFDEDFQVRG
        ME + LQP  ER+A      EEEE+EEM+M  FFALVRNFKEMRDRRRKELMIG +   A EE K+RK+MK+    VENRSTWIP+FEREDFDE+FQVRG
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTT--RVENRSTWIPRFEREDFDEDFQVRG

Query:  PAVVLP-KPCNLVKEETTA----TATMKKIKTTKVKSGEDCLDLNLAL
           +LP KP NLVKE+T+A    TA MKK K   VK+G+DCLDLNLAL
Subjt:  PAVVLP-KPCNLVKEETTA----TATMKKIKTTKVKSGEDCLDLNLAL

TrEMBL top hitse value%identityAlignment
A0A5A7UYI4 Protein NIM1-INTERACTING 18.7e-2254.67Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTR-VENRSTWIPRFEREDFDEDFQVRGP
        ME + +QP  ER A       EE  EE +ME FFALVR+FKEMRD+R KEL +G +     EE K+RK+MK  + VENRSTWIP+FEREDFDE+FQ    
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTR-VENRSTWIPRFEREDFDEDFQVRGP

Query:  AVVLPKP-CNLVKE-------ETTATATMKKIKTTKVKSGEDCLDLNLAL
        A+ LP+P CNL K         TT TA MK  K  +VK+GE  LDLNLAL
Subjt:  AVVLPKP-CNLVKE-------ETTATATMKKIKTTKVKSGEDCLDLNLAL

A0A6J1DAZ5 protein NIM1-INTERACTING 17.3e-2959.03Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKEL--MIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRG
        ME ++L+P             EEE+EEMKME FFAL+RNFKEMRDRRRKEL  MIG    D  E  KKRKKMKT      STWIP F REDFDEDFQVRG
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKEL--MIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRG

Query:  PAVVLPKPCNLVKEETTATATMKKI-KTTKVKSGEDCLDLNLAL
        P  VLPKPCNL+KE+T        + K   +K+ E+CLDLNLAL
Subjt:  PAVVLPKPCNLVKEETTATATMKKI-KTTKVKSGEDCLDLNLAL

A0A6J1H831 protein NIM1-INTERACTING 11.9e-3263.45Show/hide
Query:  MEKQSLQPPRERV----AIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQV
        MEKQSL+   +RV    A AAVDGEEE  EEMKME FFALVRNFKEMRD+RRKELMIGCD   A     +++KMKT  VENRS WIPRFEREDFDE+FQV
Subjt:  MEKQSLQPPRERV----AIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQV

Query:  RGPAVVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL
        RGPA          KEE  A A     K  KVK+ ED LDLNL+L
Subjt:  RGPAVVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL

A0A6J1JVD5 uncharacterized protein LOC1114881897.3e-2960.14Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTR-VENRSTWIPRFEREDFDEDFQVRGP
        ME Q  QPPRE +A       EEE+EE++ME F+ALVRNFKE+RDR RKE++ G    D     K RK+MKTT  V+N+S+WI RFEREDFDED QV G 
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTR-VENRSTWIPRFEREDFDEDFQVRGP

Query:  AVVLPKPCNLVKEET-TATATMKKIKTTKVKSGEDCLDLNLAL
        AV LPK C LVKE+T  A A +KK K  KV SG DCLDLNL+L
Subjt:  AVVLPKPCNLVKEET-TATATMKKIKTTKVKSGEDCLDLNLAL

A0A6J1KR57 protein NIM1-INTERACTING 11.2e-3162.41Show/hide
Query:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA
        MEKQSL+   +RVA A VD EEE++EEMKME FF LVRNFKEMRD+RRKELMI CD   A     ++KKMKT  VENRS WIPRFEREDFDE+FQVRGPA
Subjt:  MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPA

Query:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL
                  KEE  A       K  KVK+ ED LDLNL+L
Subjt:  VVLPKPCNLVKEETTATATMKKIKTTKVKSGEDCLDLNLAL

SwissProt top hitse value%identityAlignment
Q9FNZ5 Protein NIM1-INTERACTING 14.6e-0432.23Show/hide
Query:  EEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPAVVLPKPCNLVKEETTATATM
        +EEE+EE K++TFF L+++++E R RRR+EL           EN    + K+   E     +P F+ EDF +      P ++        KEE T     
Subjt:  EEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPAVVLPKPCNLVKEETTATATM

Query:  KKIKTTKVKSGEDCLDLNLAL
        ++   T+ ++ +  LDLNLAL
Subjt:  KKIKTTKVKSGEDCLDLNLAL

Arabidopsis top hitse value%identityAlignment
AT1G02450.1 NIM1-interacting 13.3e-0532.23Show/hide
Query:  EEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPAVVLPKPCNLVKEETTATATM
        +EEE+EE K++TFF L+++++E R RRR+EL           EN    + K+   E     +P F+ EDF +      P ++        KEE T     
Subjt:  EEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPAVVLPKPCNLVKEETTATATM

Query:  KKIKTTKVKSGEDCLDLNLAL
        ++   T+ ++ +  LDLNLAL
Subjt:  KKIKTTKVKSGEDCLDLNLAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAAGCAGAGTCTGCAGCCGCCGCGGGAGAGAGTCGCCATCGCCGCCGTCGATGGCGAGGAGGAGGAGGATGAGGAGATGAAGATGGAGACGTTTTTTGCTCTGGT
GAGGAATTTCAAGGAAATGCGTGATCGGCGAAGGAAGGAGTTGATGATCGGGTGCGACGCAGCGGATGCAGTGGAGGAGAATAAGAAGAGGAAGAAGATGAAGACTACTA
GAGTGGAGAATCGGTCGACGTGGATTCCGAGGTTTGAGAGAGAGGATTTCGATGAGGATTTTCAGGTGAGAGGACCGGCGGTGGTGCTTCCGAAGCCTTGTAATCTTGTT
AAGGAAGAGACGACGGCGACGGCAACGATGAAGAAGATCAAGACGACGAAAGTGAAGAGTGGAGAGGATTGTTTGGATCTAAATCTGGCTCTGTAG
mRNA sequenceShow/hide mRNA sequence
GAAAAACGCAAACAGCGTGAGAAACCTTTTTATTTGATTCTTTAGTTTTTTAGAGGGAGACTTGGTAAAATTGAAGAGACTTTTGTTTTTTAAACGCTAATGGAAAAGCA
GAGTCTGCAGCCGCCGCGGGAGAGAGTCGCCATCGCCGCCGTCGATGGCGAGGAGGAGGAGGATGAGGAGATGAAGATGGAGACGTTTTTTGCTCTGGTGAGGAATTTCA
AGGAAATGCGTGATCGGCGAAGGAAGGAGTTGATGATCGGGTGCGACGCAGCGGATGCAGTGGAGGAGAATAAGAAGAGGAAGAAGATGAAGACTACTAGAGTGGAGAAT
CGGTCGACGTGGATTCCGAGGTTTGAGAGAGAGGATTTCGATGAGGATTTTCAGGTGAGAGGACCGGCGGTGGTGCTTCCGAAGCCTTGTAATCTTGTTAAGGAAGAGAC
GACGGCGACGGCAACGATGAAGAAGATCAAGACGACGAAAGTGAAGAGTGGAGAGGATTGTTTGGATCTAAATCTGGCTCTGTAGTTTTTTTTTTTTTTTTGCCAATTTG
TAAAAAAGAATTTTATCAGAAAGAAAAGAATGAAAAAAGAGAATATCTAATTTTGGATGTTTTGTATTTTGGAAGGAAGACGAATGGGGTAACGTTTTAAGGCATTTATG
TTCACGATCACGAGCCACACGATTTAATAAATCTAACAGATTTAAAATAAAATAATAGTTTAAAATCATACGTCAGTTTGCTTCAATTTTGAAAGTAT
Protein sequenceShow/hide protein sequence
MEKQSLQPPRERVAIAAVDGEEEEDEEMKMETFFALVRNFKEMRDRRRKELMIGCDAADAVEENKKRKKMKTTRVENRSTWIPRFEREDFDEDFQVRGPAVVLPKPCNLV
KEETTATATMKKIKTTKVKSGEDCLDLNLAL