; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005916 (gene) of Snake gourd v1 genome

Gene IDTan0005916
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationLG02:10783906..10788040
RNA-Seq ExpressionTan0005916
SyntenyTan0005916
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022450.1 hypothetical protein SDJN02_16181, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-10379.07Show/hide
Query:  MGDH----PHMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSK
        MGDH    PH  SSMSPPVVDRQPP   SASDLT LNSQSYSSS T+  F DFPSH   QLDAVQTHWTDEKHRSYL SLEASFVQELHQYRRL ALSSK
Subjt:  MGDH----PHMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSK

Query:  QKMRRKPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPP
        QKMR +P MP+ISSSELMVLQDASWQKANIG+NDPL ER ADSPAIL+DVWIN FPSAGK CT ETPDLLE  GS SD RHLRNT NS  SARSSQQ+PP
Subjt:  QKMRRKPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPP

Query:  CRRDSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK
        C R+SYTIITEVSDQNFVD  PGE+S GMP AKR KKASSDS +NDQ+VPYK  S E+
Subjt:  CRRDSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]5.0e-9975.1Show/hide
Query:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR
        H  SSMSPPV DR+ P   SASDLT LNS+SYSSS T+   +      PSH  FQLDAVQTHWT+EKHR +LDSLEASFVQ+LH+YR L ALSSKQKMRR
Subjt:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR

Query:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS
        KPIMPNISSSE MVLQDASWQKAN+G+ DPL ++TADSPAILEDVWINHFPSAG QCTLET D+LE CGSCSDR H+RN TNS  SARSSQQ+PPC RDS
Subjt:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS

Query:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK
        +TI+TEVSDQNFVDTHPGELS+G PI KR KKASSDS  N+++ PYK LSSE+
Subjt:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK

XP_022972373.1 uncharacterized protein LOC111470946 isoform X2 [Cucurbita maxima]2.1e-9774.7Show/hide
Query:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR
        H  SSMSPPV DR+     SASDLT LNS+SYSSS T+   +      PSH  FQLDAVQTHWTDEKHR +LD+LEASFVQ+LH+YR L A SSKQKMRR
Subjt:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR

Query:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS
        KPIMPNISSSE MVLQDASWQKANIG+ DPL  +TADSPAILEDVWINHFPSAG Q T ET D+LE CGSCSDR H+RN TNSC SARSSQQ+PPC RDS
Subjt:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS

Query:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK
        +TI+ EVSDQNFVDTHPGELS G PI KR KKASSDSL ND++ PYK LSSE+
Subjt:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK

XP_023529516.1 uncharacterized protein LOC111792349 isoform X1 [Cucurbita pepo subsp. pepo]6.1e-10579.84Show/hide
Query:  MGDH----PHMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSK
        MGDH    PH  SSMSPPVVDRQPP   SASDLT LNSQSYSSS+T+  F DFPSH   QLDAVQTHWTDEKHRSYL SLEASFVQELHQYRRL ALSSK
Subjt:  MGDH----PHMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSK

Query:  QKMRRKPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPP
        QKMR +P MP+ISSSELMVLQDASWQKANIG+NDPL ER AD PAIL+DVWIN FPSAGKQCT ETPDLLE  GS SDRRHLRNT NS  SARSSQQ+PP
Subjt:  QKMRRKPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPP

Query:  CRRDSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK
        C R+SYTIITEVSDQNFVD HPGE+S GMP AKR KKASSDS +NDQ+VPYK  S E+
Subjt:  CRRDSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK

XP_023553839.1 uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo]3.2e-9875.1Show/hide
Query:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR
        H  SSMSPPV DR+ P   SASDLT LNS+SYSSS T+   +      PSH  FQLDAVQTHWTDEKHR +LDSLEASFVQ+LH+YR L A SSKQK+RR
Subjt:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR

Query:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS
        K IMPNISSSE +VLQDASWQKANIG+ DPL  +TADSPAILEDVWINHFPSAGK CTLET D+LE CGSCSDRRH+RN TNSC SARSSQQ+P C RDS
Subjt:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS

Query:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK
        +TI TEVSDQNFVDTHPGELS+G PI KR KKASSDS  ND++ PYK LSSE+
Subjt:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK

TrEMBL top hitse value%identityAlignment
A0A1S3BZU8 uncharacterized protein LOC103495241 isoform X16.8e-9473.62Show/hide
Query:  MGDHPHMQSSMSPPVVDRQPP-----SASDLTLLNSQSYSSSITLHGFDDF-PSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQ
        MGD  H  S +S P+ DRQ P     S +D T  NS+S+SSSIT+ G   F  SH   QLDA QTHWTDEKHRSYLDSLEASFVQ LHQ+RR+HALSSKQ
Subjt:  MGDHPHMQSSMSPPVVDRQPP-----SASDLTLLNSQSYSSSITLHGFDDF-PSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQ

Query:  KMRRKPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPC
        KMRRKPIM + SSSELMVLQDASWQKANIG+NDPL ++TADSPAILED+WINHFPSAGKQC+LETPDLLE CGSCSDRRH+R+ TNSCGSAR+SQQ  PC
Subjt:  KMRRKPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPC

Query:  RRDSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLS
          +SYTIITEVSDQNFVD  PGELS GMP AKR KKASS  L N Q+VP+K LS
Subjt:  RRDSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLS

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X22.4e-9975.1Show/hide
Query:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR
        H  SSMSPPV DR+ P   SASDLT LNS+SYSSS T+   +      PSH  FQLDAVQTHWT+EKHR +LDSLEASFVQ+LH+YR L ALSSKQKMRR
Subjt:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR

Query:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS
        KPIMPNISSSE MVLQDASWQKAN+G+ DPL ++TADSPAILEDVWINHFPSAG QCTLET D+LE CGSCSDR H+RN TNS  SARSSQQ+PPC RDS
Subjt:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS

Query:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK
        +TI+TEVSDQNFVDTHPGELS+G PI KR KKASSDS  N+++ PYK LSSE+
Subjt:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X12.1e-9575.31Show/hide
Query:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR
        H  SSMSPPV DR+ P   SASDLT LNS+SYSSS T+   +      PSH  FQLDAVQTHWT+EKHR +LDSLEASFVQ+LH+YR L ALSSKQKMRR
Subjt:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR

Query:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS
        KPIMPNISSSE MVLQDASWQKAN+G+ DPL ++TADSPAILEDVWINHFPSAG QCTLET D+LE CGSCSDR H+RN TNS  SARSSQQ+PPC RDS
Subjt:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS

Query:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQI
        +TI+TEVSDQNFVDTHPGELS+G PI KR KKASSDS  N+++
Subjt:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQI

A0A6J1I4M4 uncharacterized protein LOC111470946 isoform X18.9e-9474.9Show/hide
Query:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR
        H  SSMSPPV DR+     SASDLT LNS+SYSSS T+   +      PSH  FQLDAVQTHWTDEKHR +LD+LEASFVQ+LH+YR L A SSKQKMRR
Subjt:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR

Query:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS
        KPIMPNISSSE MVLQDASWQKANIG+ DPL  +TADSPAILEDVWINHFPSAG Q T ET D+LE CGSCSDR H+RN TNSC SARSSQQ+PPC RDS
Subjt:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS

Query:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQI
        +TI+ EVSDQNFVDTHPGELS G PI KR KKASSDSL ND++
Subjt:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQI

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X21.0e-9774.7Show/hide
Query:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR
        H  SSMSPPV DR+     SASDLT LNS+SYSSS T+   +      PSH  FQLDAVQTHWTDEKHR +LD+LEASFVQ+LH+YR L A SSKQKMRR
Subjt:  HMQSSMSPPVVDRQPP---SASDLTLLNSQSYSSSITLHGFDD----FPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRR

Query:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS
        KPIMPNISSSE MVLQDASWQKANIG+ DPL  +TADSPAILEDVWINHFPSAG Q T ET D+LE CGSCSDR H+RN TNSC SARSSQQ+PPC RDS
Subjt:  KPIMPNISSSELMVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDS

Query:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK
        +TI+ EVSDQNFVDTHPGELS G PI KR KKASSDSL ND++ PYK LSSE+
Subjt:  YTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVPYKSLSSEK

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 271.4e-1132.68Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +         +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN

Query:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTII---TEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIV
        H+ P    Q  +      +V  S + ++ +     S GSA S +QL    RD   I     EVSDQNFV  + G         K      S+S S DQ+V
Subjt:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTII---TEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIV

Query:  PYKSL
        P   L
Subjt:  PYKSL

Q8L983 Cold-regulated protein 282.3e-0627.83Show/hide
Query:  DLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQ-----THWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRRKPIMPNI--SSSELMVLQDAS
        D++  +++S S S   +  D   +  + + DA       T WT+EKH SYLD LE+SFV++L+    L    +++  R + +  N   S+ +  VLQ+  
Subjt:  DLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQ-----THWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRRKPIMPNI--SSSELMVLQDAS

Query:  WQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTIITEVSDQNFVDTHPGE
        WQK N GK                           KQ  LET        + S R    N+  +     + Q    C  +  T  +E S QNF +    E
Subjt:  WQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTIITEVSDQNFVDTHPGE

Query:  LSNGMPIAKRSKKASSD--SLSNDQIVPYK
           G    KR ++A++D  SL  DQ+VP +
Subjt:  LSNGMPIAKRSKKASSD--SLSNDQIVPYK

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)1.6e-0727.83Show/hide
Query:  DLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQ-----THWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRRKPIMPNI--SSSELMVLQDAS
        D++  +++S S S   +  D   +  + + DA       T WT+EKH SYLD LE+SFV++L+    L    +++  R + +  N   S+ +  VLQ+  
Subjt:  DLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQ-----THWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRRKPIMPNI--SSSELMVLQDAS

Query:  WQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTIITEVSDQNFVDTHPGE
        WQK N GK                           KQ  LET        + S R    N+  +     + Q    C  +  T  +E S QNF +    E
Subjt:  WQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTIITEVSDQNFVDTHPGE

Query:  LSNGMPIAKRSKKASSD--SLSNDQIVPYK
           G    KR ++A++D  SL  DQ+VP +
Subjt:  LSNGMPIAKRSKKASSD--SLSNDQIVPYK

AT4G33980.2 FUNCTIONS IN: molecular_function unknown1.6e-0727.83Show/hide
Query:  DLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQ-----THWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRRKPIMPNI--SSSELMVLQDAS
        D++  +++S S S   +  D   +  + + DA       T WT+EKH SYLD LE+SFV++L+    L    +++  R + +  N   S+ +  VLQ+  
Subjt:  DLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQ-----THWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRRKPIMPNI--SSSELMVLQDAS

Query:  WQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTIITEVSDQNFVDTHPGE
        WQK N GK                           KQ  LET        + S R    N+  +     + Q    C  +  T  +E S QNF +    E
Subjt:  WQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTIITEVSDQNFVDTHPGE

Query:  LSNGMPIAKRSKKASSD--SLSNDQIVPYK
           G    KR ++A++D  SL  DQ+VP +
Subjt:  LSNGMPIAKRSKKASSD--SLSNDQIVPYK

AT5G42900.1 cold regulated gene 279.9e-1332.68Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +         +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN

Query:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTII---TEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIV
        H+ P    Q  +      +V  S + ++ +     S GSA S +QL    RD   I     EVSDQNFV  + G         K      S+S S DQ+V
Subjt:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTII---TEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIV

Query:  PYKSL
        P   L
Subjt:  PYKSL

AT5G42900.2 cold regulated gene 279.9e-1332.68Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +         +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN

Query:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTII---TEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIV
        H+ P    Q  +      +V  S + ++ +     S GSA S +QL    RD   I     EVSDQNFV  + G         K      S+S S DQ+V
Subjt:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTII---TEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIV

Query:  PYKSL
        P   L
Subjt:  PYKSL

AT5G42900.3 cold regulated gene 275.8e-1332.35Show/hide
Query:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  +  VL D  WQK N+ + +         +S   L   WI 
Subjt:  VQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMR--------RKPIMPNISSSELMVLQDASWQKANIGKNDPLF--ERTADSPAILEDVWIN

Query:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRR--DSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVP
        H+ P    Q  +      +V  S + ++ +     S GSA S +QL    R  D  ++  EVSDQNFV  + G         K      S+S S DQ+VP
Subjt:  HF-PSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRR--DSYTIITEVSDQNFVDTHPGELSNGMPIAKRSKKASSDSLSNDQIVP

Query:  YKSL
           L
Subjt:  YKSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGACCACCCTCATATGCAGTCGTCCATGTCGCCGCCGGTTGTAGATCGACAACCGCCCTCCGCCAGCGACTTGACTCTTTTGAACTCACAATCCTACTCTTCTTC
CATTACTCTTCATGGGTTCGACGATTTCCCTTCTCATCCTTCTTTTCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTTTAG
AAGCATCTTTTGTGCAAGAGTTGCATCAATATAGACGCTTGCATGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGTTG
ATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAAGAATGATCCTTTATTCGAAAGGACTGCCGATTCTCCTGCTATTTTAGAGGATGTATGGATAAATCA
TTTTCCTTCTGCAGGAAAACAGTGTACTCTGGAGACTCCTGATCTCCTTGAAGTATGTGGAAGTTGTAGTGATAGGAGACACTTAAGAAACACGACAAACTCCTGTGGAT
CTGCCAGAAGTTCACAGCAGCTCCCTCCATGCCGTCGTGATTCTTATACAATCATTACAGAAGTTTCAGATCAGAACTTTGTGGATACTCATCCAGGAGAGTTGTCTAAT
GGCATGCCTATTGCAAAAAGATCAAAGAAAGCTTCTTCTGATTCTTTGAGCAACGACCAGATTGTACCATATAAAAGTCTTTCATCAGAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ACCGCTTCTCTTCTCTCTCTTCGCTTCGTTTCATTTCATTTCTTCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTCCGCCCACGATTCCTTTTTCTTTGATT
TCATTCCTATATTTCCCTTTTTCTCCGAACGATTTCCCCTTGTTTTTGATCCATCAATCATGGGTGACCACCCTCATATGCAGTCGTCCATGTCGCCGCCGGTTGTAGAT
CGACAACCGCCCTCCGCCAGCGACTTGACTCTTTTGAACTCACAATCCTACTCTTCTTCCATTACTCTTCATGGGTTCGACGATTTCCCTTCTCATCCTTCTTTTCAACT
GGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTTTAGAAGCATCTTTTGTGCAAGAGTTGCATCAATATAGACGCTTGCATGCTTTGT
CCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAAGAATGAT
CCTTTATTCGAAAGGACTGCCGATTCTCCTGCTATTTTAGAGGATGTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTACTCTGGAGACTCCTGATCTCCTTGA
AGTATGTGGAAGTTGTAGTGATAGGAGACACTTAAGAAACACGACAAACTCCTGTGGATCTGCCAGAAGTTCACAGCAGCTCCCTCCATGCCGTCGTGATTCTTATACAA
TCATTACAGAAGTTTCAGATCAGAACTTTGTGGATACTCATCCAGGAGAGTTGTCTAATGGCATGCCTATTGCAAAAAGATCAAAGAAAGCTTCTTCTGATTCTTTGAGC
AACGACCAGATTGTACCATATAAAAGTCTTTCATCAGAAAAATAAAAGCCAGACGCCACATTGTCTTCAGAACATCCTCAAAACCTTGTGCCTCCAAATTCAGATTTGTG
TTACAATGTAAGAGGGAGCTGACAACAATTCATTCCAGCATGTGAAAAAATTGGCTGTTCAAGCTTGTTAACCAAATGCGACACGGTTTTGTTTTCCATTCAAAAGAGCG
CATTGTAAAGAAAATAAAGGGAAGTGGCGGCAATAATTCTACCAGAAGATCTGCGGCAGGAAGGAGAAAATATGTTTGTATATAGTACAAACTAAACTTTTTCCTAGTTC
AAATATTGAGTGAAATATATGTTAACCCTTTCTTTTCCCCTGTTTTCCTTTTTCTTAGAGGTTGAAAAAAATGGAAATTCTAATAGATATAGGGAATGAATATACATGTT
ATAGAGAAGCTAGACACCCTGATAGTGAGATAGATACACACCTTTTTAATTTGTTTGAAATACTCTCATTTTGAAGCTCTGTTAGAGATCTCAAGTGTAAATTATTACAT
AAAACAAAGTGCCATTCCTTTGTGACACTGAAAAGAACTGAACAAACGTATTTGATTTTCTTTAGGAGGAAGTTTCATCATATTGTATCCTGATATTTTTACATTCCAT
Protein sequenceShow/hide protein sequence
MGDHPHMQSSMSPPVVDRQPPSASDLTLLNSQSYSSSITLHGFDDFPSHPSFQLDAVQTHWTDEKHRSYLDSLEASFVQELHQYRRLHALSSKQKMRRKPIMPNISSSEL
MVLQDASWQKANIGKNDPLFERTADSPAILEDVWINHFPSAGKQCTLETPDLLEVCGSCSDRRHLRNTTNSCGSARSSQQLPPCRRDSYTIITEVSDQNFVDTHPGELSN
GMPIAKRSKKASSDSLSNDQIVPYKSLSSEK