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Tan0005929 (gene) of Snake gourd v1 genome

Gene IDTan0005929
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPMD domain-containing protein
Genome locationLG08:21030689..21031234
RNA-Seq ExpressionTan0005929
SyntenyTan0005929
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]9.0e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P     +  W  L+ +S +  L  +  L+ G    +LQSSIH +A N    LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF FT CYWE LE +VGRN  LL     +  V ASLYTYD N+DVV AF E WCP+ NTL+T  GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
KAA0052363.1 hypothetical protein E6C27_scaffold207G002060 [Cucumis melo var. makuwa]6.9e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P     +  W  L+ +S +  L  +  L+ G    +LQSSIH +A N    LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF F  CYWE LE +VGRN  LL     +  V ASLYTYDCN+DVV AF E WCP+ NTL+T  GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
KAA0061098.1 putative mitochondrial protein [Cucumis melo var. makuwa]9.0e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ Q  +  L+L+ E+P     +  W  L+ +S +S L  +  L+ G    +LQS IH +A N    LT   RLIEG+THW
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF FT CYWE LE +VGRN  LL   H +  V ASLYTYD NNDVV AF E WCP+ NTL+T  GE+SI LWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
TYK00336.1 hypothetical protein E5676_scaffold1923G00140 [Cucumis melo var. makuwa]4.0e-4250.55Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P        W  L  +S +  L  +  L  G    +LQSSIH +A+N S  LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF FT CYWE LE +VGRN  LL     +  V ASLYTYDCN+DVV AF E WCP+ NTL+   GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
TYK20969.1 hypothetical protein E5676_scaffold18270G00010 [Cucumis melo var. makuwa]6.9e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P     +  W  L+ +S +  L  +  L+ G    +LQSSIH +A N    LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF F  CYWE LE +VGRN  LL     +  V ASLYTYDCN+DVV AF E WCP+ NTL+T  GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein4.4e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P     +  W  L+ +S +  L  +  L+ G    +LQSSIH +A N    LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF FT CYWE LE +VGRN  LL     +  V ASLYTYD N+DVV AF E WCP+ NTL+T  GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
A0A5A7U8X8 PMD domain-containing protein3.3e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P     +  W  L+ +S +  L  +  L+ G    +LQSSIH +A N    LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF F  CYWE LE +VGRN  LL     +  V ASLYTYDCN+DVV AF E WCP+ NTL+T  GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
A0A5D3BQ12 PMD domain-containing protein2.0e-4250.55Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P        W  L  +S +  L  +  L  G    +LQSSIH +A+N S  LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF FT CYWE LE +VGRN  LL     +  V ASLYTYDCN+DVV AF E WCP+ NTL+   GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
A0A5D3BXQ4 Putative mitochondrial protein4.4e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ Q  +  L+L+ E+P     +  W  L+ +S +S L  +  L+ G    +LQS IH +A N    LT   RLIEG+THW
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF FT CYWE LE +VGRN  LL   H +  V ASLYTYD NNDVV AF E WCP+ NTL+T  GE+SI LWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
A0A5D3DCE5 PMD domain-containing protein3.3e-4250Show/hide
Query:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW
        MV+F E   SG ++L+IL D+ QP +  L+L+ E+P     +  W  L+ +S +  L  +  L+ G    +LQSSIH +A N    LTL  RLIEG+T W
Subjt:  MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDS-MSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHW

Query:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
          V K+PGEF F  CYWE LE +VGRN  LL     +  V ASLYTYDCN+DVV AF E WCP+ NTL+T  GE+SISLWDL
Subjt:  NPVMKIPGEFTFTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCACTTCGTCGAACATATCTCATCGGGGCAGAAATATCTCATCATTTTGAAGGATAAAGCTCAACCCATTAAGAGTAGGCTTACACTATTAGCTGAAGAACCACT
GACCGTTCCTCTTTCACCCCTGTGGCTCGACTTAAATTTTGATTCTATGTCTGAACTTGAAACAAAAAAACTTTTGAACTCTGGCGATAAAGTACGAATTCTGCAATCTT
CCATCCATGGCAAAGCCTACAATCGAAGTCTAGAGCTAACCTTATGGCATCGTTTGATTGAAGGCGAGACTCATTGGAATCCCGTGATGAAGATACCTGGAGAATTTACT
TTCACTTCCTGTTATTGGGAACGGTTGGAGTTTATGGTTGGTCGGAACGAGGCACTACTTTGCGAGAATCACCGATTCAATGGGGTGATGGCCTCCCTTTATACTTACGA
TTGCAATAATGATGTGGTACTAGCTTTTCTTGAAGGTTGGTGTCCAACAATGAATACTCTCTATACTGCGACGGGTGAAATGTCCATCTCTCTATGGGACTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCACTTCGTCGAACATATCTCATCGGGGCAGAAATATCTCATCATTTTGAAGGATAAAGCTCAACCCATTAAGAGTAGGCTTACACTATTAGCTGAAGAACCACT
GACCGTTCCTCTTTCACCCCTGTGGCTCGACTTAAATTTTGATTCTATGTCTGAACTTGAAACAAAAAAACTTTTGAACTCTGGCGATAAAGTACGAATTCTGCAATCTT
CCATCCATGGCAAAGCCTACAATCGAAGTCTAGAGCTAACCTTATGGCATCGTTTGATTGAAGGCGAGACTCATTGGAATCCCGTGATGAAGATACCTGGAGAATTTACT
TTCACTTCCTGTTATTGGGAACGGTTGGAGTTTATGGTTGGTCGGAACGAGGCACTACTTTGCGAGAATCACCGATTCAATGGGGTGATGGCCTCCCTTTATACTTACGA
TTGCAATAATGATGTGGTACTAGCTTTTCTTGAAGGTTGGTGTCCAACAATGAATACTCTCTATACTGCGACGGGTGAAATGTCCATCTCTCTATGGGACTTATGA
Protein sequenceShow/hide protein sequence
MVHFVEHISSGQKYLIILKDKAQPIKSRLTLLAEEPLTVPLSPLWLDLNFDSMSELETKKLLNSGDKVRILQSSIHGKAYNRSLELTLWHRLIEGETHWNPVMKIPGEFT
FTSCYWERLEFMVGRNEALLCENHRFNGVMASLYTYDCNNDVVLAFLEGWCPTMNTLYTATGEMSISLWDL