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Tan0005930 (gene) of Snake gourd v1 genome

Gene IDTan0005930
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationLG02:2442138..2442934
RNA-Seq ExpressionTan0005930
SyntenyTan0005930
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031619.1 hypothetical protein E6C27_scaffold139G003870 [Cucumis melo var. makuwa]3.0e-3482.35Show/hide
Query:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVD
        MAK C LFC I+A+ILLIQAMTS AT TD  PLSAAPEP+E G  +GS+VAE PEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAA+FCYIRVTRK+DGVD
Subjt:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVD

Query:  SV
        SV
Subjt:  SV

KAE8075791.1 hypothetical protein FH972_014479 [Carpinus fangiana]2.3e-1849.12Show/hide
Query:  MAKICLFCFILAQILLIQAMTSFATETDR------------------RPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIF
        M ++ L CFIL +IL++QAM + +  +++                  +P+S+A E S  G GD      P  IRRLGKHH DKSVAGGGVIIGGLVT +F
Subjt:  MAKICLFCFILAQILLIQAMTSFATETDR------------------RPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIF

Query:  AAIFCYIRVTRKKD
        AA+FCYIRVTR++D
Subjt:  AAIFCYIRVTRKKD

KAE8645753.1 hypothetical protein Csa_020263 [Cucumis sativus]7.4e-2572.53Show/hide
Query:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIR
        MAKIC LFC I+ +I LIQA+T+    T   PLS APE SE G  +GSEVAE PEIRRLGKHHGDKS+AGGGVIIGGLVTA+FAA+FCYIR
Subjt:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIR

KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3077.23Show/hide
Query:  MAKICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVDS
        MAKI L C ILAQILLIQAM S AT T    +SAAPEPSET + +G  +AE PEIRRLGKHH DKSVAGGGVIIGGLVTA+FAA+FCYIRVTRK+DGVDS
Subjt:  MAKICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVDS

Query:  V
        V
Subjt:  V

KAG7011935.1 hypothetical protein SDJN02_26843, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2976.24Show/hide
Query:  MAKICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVDS
        MAKI L   ILAQILLIQAM S AT T    +SAAPEPSET + +G  +AE PEIRRLGKHH DKSVAGGGVIIGGLVTA+FAA+FCYIRVTRK+DGVDS
Subjt:  MAKICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVDS

Query:  V
        V
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A067KB75 Uncharacterized protein5.5e-1860Show/hide
Query:  KICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHH-GDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVDSV
        ++ + C ILA IL++QA    A E++++  S A +P  + H    E AE PEIRRLGKHH  DKSVAGGGVIIGGLVTAIFAA+FCYIRVTRKK   D V
Subjt:  KICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHH-GDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVDSV

A0A0A0K3N0 Uncharacterized protein1.9e-3174.51Show/hide
Query:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVD
        MAKIC LFC I+ +I LIQA+T+    T   PLS APE SE G  +GSEVAE PEIRRLGKHHGDKS+AGGGVIIGGLVTA+FAA+FCYIRVTRK+DGVD
Subjt:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVD

Query:  SV
        SV
Subjt:  SV

A0A5D3C590 Uncharacterized protein1.4e-3482.35Show/hide
Query:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVD
        MAK C LFC I+A+ILLIQAMTS AT TD  PLSAAPEP+E G  +GS+VAE PEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAA+FCYIRVTRK+DGVD
Subjt:  MAKIC-LFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVD

Query:  SV
        SV
Subjt:  SV

A0A5N6RDG0 Uncharacterized protein1.1e-1849.12Show/hide
Query:  MAKICLFCFILAQILLIQAMTSFATETDR------------------RPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIF
        M ++ L CFIL +IL++QAM + +  +++                  +P+S+A E S  G GD      P  IRRLGKHH DKSVAGGGVIIGGLVT +F
Subjt:  MAKICLFCFILAQILLIQAMTSFATETDR------------------RPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIF

Query:  AAIFCYIRVTRKKD
        AA+FCYIRVTR++D
Subjt:  AAIFCYIRVTRKKD

A0A7N2R9A0 Uncharacterized protein7.2e-1852.89Show/hide
Query:  MAKICLFCF--ILAQILLIQAMTSFATETDRRP-----------------LSAAPEPSETGHGDG----SEVAEPPEIRRLGKHHGDKSVAGGGVIIGGL
        M  + LFCF  ILA+IL++QAM   +  ++  P                 L+  P  S  G  +G    S VAE PEIRRLGKHH DKSVAGGGVIIGGL
Subjt:  MAKICLFCF--ILAQILLIQAMTSFATETDRRP-----------------LSAAPEPSETGHGDG----SEVAEPPEIRRLGKHHGDKSVAGGGVIIGGL

Query:  VTAIFAAIFCYIRVTRKKDGV
        VTAIFAA+FCYIRVTRK+  V
Subjt:  VTAIFAAIFCYIRVTRKKDGV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein7.1e-1041.05Show/hide
Query:  AKICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHG--DKSVAGGGVIIGGLVTAIFAAIFCYIRVTRK
        AK  + CF+L  +  + A +S A     R L     P E    +  EV+   E  R G HH   ++SVAGGGVI+GGL T     +FCYIR TRK
Subjt:  AKICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHG--DKSVAGGGVIIGGLVTAIFAAIFCYIRVTRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAATTTGCCTCTTTTGCTTCATTCTGGCCCAGATCTTGCTGATTCAAGCAATGACTTCATTTGCCACAGAAACAGATCGCCGCCCTCTGTCGGCGGCGCCGGA
GCCATCGGAGACCGGCCACGGAGATGGGTCTGAAGTGGCGGAGCCGCCCGAGATCCGGCGGCTGGGAAAGCACCACGGAGATAAGTCGGTGGCCGGTGGGGGTGTCATCA
TCGGCGGCCTTGTAACGGCCATTTTTGCAGCTATTTTTTGTTATATTCGGGTTACTAGAAAAAAAGATGGGGTTGATTCTGTTCGTTGA
mRNA sequenceShow/hide mRNA sequence
ACACACACTCACATCACACACTTAAAAATAAAAAAAACCATTCAATTCCAAACAAACCCTACATCAAACCTCCCTCTATTTAACCTCCAAAATCCCAATTCCAATTCTTC
AACTTCACCACAAAACACAAATTCAAAAACCCATTTTCACAAACCTCTTTAAATCAATTCAAGCTTCTCCATTTCCAAATCCCATGGCCAAAATTTGCCTCTTTTGCTTC
ATTCTGGCCCAGATCTTGCTGATTCAAGCAATGACTTCATTTGCCACAGAAACAGATCGCCGCCCTCTGTCGGCGGCGCCGGAGCCATCGGAGACCGGCCACGGAGATGG
GTCTGAAGTGGCGGAGCCGCCCGAGATCCGGCGGCTGGGAAAGCACCACGGAGATAAGTCGGTGGCCGGTGGGGGTGTCATCATCGGCGGCCTTGTAACGGCCATTTTTG
CAGCTATTTTTTGTTATATTCGGGTTACTAGAAAAAAAGATGGGGTTGATTCTGTTCGTTGATATTGATCCCAATTTCTAGTTTTTGCCTTACACAATAGATATATAAAT
ATATTCTTTTGATTCTTAAATTTTTTGGGATGATACGTTTTGGGTTTTTTTTTTTAGTAGTTTATGAAAGTGGTCGGAGGCATTCAAACTTCTTACTTTTGGTCCCGTCA
ATTTTACCATTGAACTATGCTTACAAGTATAGTGTTTCACCATTTTTAGTAGAAAATTTAGATTATGTTTGATAACTATTTTGTTTTTTATTTTTAGTTTTTGAAATTTA
AAATTAAAAATATTACTTATACCAATG
Protein sequenceShow/hide protein sequence
MAKICLFCFILAQILLIQAMTSFATETDRRPLSAAPEPSETGHGDGSEVAEPPEIRRLGKHHGDKSVAGGGVIIGGLVTAIFAAIFCYIRVTRKKDGVDSVR