; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0005963 (gene) of Snake gourd v1 genome

Gene IDTan0005963
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCRS2-associated factor 2, mitochondrial
Genome locationLG01:111169732..111172511
RNA-Seq ExpressionTan0005963
SyntenyTan0005963
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0006397 - mRNA processing (biological process)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR001890 - RNA-binding, CRM domain
IPR035920 - YhbY-like superfamily
IPR044599 - CRS2-associated factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592037.1 CRS2-associated factor 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.9e-9882.57Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP
        MAIHFRTRI+ PDHSNQK SGY L I RF SKSLSE+ YDPPFSP SKLQK K KK  + NS+S KN TLP  SDLPFDFFYSYSETNPSV PIG+RESP
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP

Query:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        KFSPFGPGRLDRKWTGTSAP+EVEVKINEVLEERKR+LGDPL+EEEVAELVE YRHNNCSRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLDM
Subjt:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNIFFHLEFLSRTSLVGR
        +NI FHLE  S   ++ R
Subjt:  DNIFFHLEFLSRTSLVGR

KAG7024913.1 CRS2-associated factor 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-9882.11Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP
        MAIHFRTRI+ PDHSNQK SGY L I RF SKSL+E+ YDPPFSP SKLQK K KK  + NS+S KN TLP  SDLPFDFFYSYSETNPSV PIG+RESP
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP

Query:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        KFSPFGPGRLDRKWTGTSAP+EVEVKINEVLEERKR+LGDPL+EEEVAELVE YRHNNCSRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLDM
Subjt:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNIFFHLEFLSRTSLVGR
        +NI FHLE  S   ++ R
Subjt:  DNIFFHLEFLSRTSLVGR

XP_022139762.1 CRS2-associated factor 2, mitochondrial [Momordica charantia]3.0e-9983.33Show/hide
Query:  IHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKF
        IHFRTRIR P+HSNQKP GY LLI RF+SKS +E +YDPPFSPASKL+K KNKKTH  NSSSNKNPTLP  SDLPFDFFYSYSETNPSV+PIGFRESPKF
Subjt:  IHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKF

Query:  SPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
        SPFGPGRLDRKW+GTSAPA +EVKI EV EER R+LGDPL+EEEVAELVE YRH+NCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
Subjt:  SPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN

Query:  IFFHLEFLSRTSLVGR
        I FHLE  S   ++ R
Subjt:  IFFHLEFLSRTSLVGR

XP_023535436.1 CRS2-associated factor 2, mitochondrial [Cucurbita pepo subsp. pepo]5.1e-9983.03Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP
        MAIHFRTRIR PDHSNQK SGY LLI RF SKSLSE+ YDPPFSP SKLQK K KK  + NS+S KN TLP  SDLPFDFFYSYSETNPSV PIG+RESP
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP

Query:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        KFSPFGPGRLDRKWTGTSAP+EVEVKINEVLEERKR+LGDPL+EEEVAELVE YRHNNCSRQINLGKGGVTHNMLDDIHNHW+R EAVRIKCLGVPTLDM
Subjt:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNIFFHLEFLSRTSLVGR
        +NI FHLE  S   ++ R
Subjt:  DNIFFHLEFLSRTSLVGR

XP_038900170.1 CRS2-associated factor 2, mitochondrial [Benincasa hispida]6.5e-10283.94Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP
        MA HFRTRIR PDHSN+KPSGY   I RF+SKSLSESSYDPPF+P SKL+K K KKTH+ NS+SN+ PTLP QSDLPFDFFYSYSETNPSV PIG+RESP
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP

Query:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        KFSPFGPGRLDRKWTGTSAPA VEVKINEVLEERKR+LGDPL+EEEVAELVE YRHNNCSRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLDM
Subjt:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNIFFHLEFLSRTSLVGR
        DNI FHLE  S   ++ R
Subjt:  DNIFFHLEFLSRTSLVGR

TrEMBL top hitse value%identityAlignment
A0A0A0LD46 Uncharacterized protein8.0e-9881.36Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNK--KTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRE
        MAIHFRTRIR PDHSN KPSGY   ISRF+SKSLSES+YDPPFSP SKLQK K K  K H  NS+SN+NPTLP +S LPFDFFYSYSETNP V PIG+RE
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNK--KTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRE

Query:  SPKFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTL
        SPKFSPFGPGRLDRKWTGTSAP+ VEV INEVLEERKR+LGDPL +EEVAELVE YRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTL
Subjt:  SPKFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTL

Query:  DMDNIFFHLEFLSRTSLVGR
        DMDNI FHLE  S   ++ R
Subjt:  DMDNIFFHLEFLSRTSLVGR

A0A1S3BYZ9 CRS2-associated factor 2, mitochondrial1.0e-9779.39Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQK-PKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRES
        MAIHFRTRIR PD SNQKPSGY   ISRF+SKSLSES+YDPPFSP SKLQK  K KK H  NS+SN+NPTLP +S LPFDFFYSYSETNP V PIG+RES
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQK-PKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRES

Query:  PKFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLD
        PKFSPFGPGRLDRKWTGTSAP+ VEV INEVLEERKR+LGDPL++EEVAELVE YRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLD
Subjt:  PKFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLD

Query:  MDNIFFHLEFLSRTSLVGRLYIDISMSF
        M+NI FHLE  S   ++ R YI+I + +
Subjt:  MDNIFFHLEFLSRTSLVGRLYIDISMSF

A0A5D3BGH7 CRS2-associated factor 21.0e-9779.39Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQK-PKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRES
        MAIHFRTRIR PD SNQKPSGY   ISRF+SKSLSES+YDPPFSP SKLQK  K KK H  NS+SN+NPTLP +S LPFDFFYSYSETNP V PIG+RES
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQK-PKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRES

Query:  PKFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLD
        PKFSPFGPGRLDRKWTGTSAP+ VEV INEVLEERKR+LGDPL++EEVAELVE YRH++CSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLD
Subjt:  PKFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLD

Query:  MDNIFFHLEFLSRTSLVGRLYIDISMSF
        M+NI FHLE  S   ++ R YI+I + +
Subjt:  MDNIFFHLEFLSRTSLVGRLYIDISMSF

A0A6J1CEV8 CRS2-associated factor 2, mitochondrial1.5e-9983.33Show/hide
Query:  IHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKF
        IHFRTRIR P+HSNQKP GY LLI RF+SKS +E +YDPPFSPASKL+K KNKKTH  NSSSNKNPTLP  SDLPFDFFYSYSETNPSV+PIGFRESPKF
Subjt:  IHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKF

Query:  SPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
        SPFGPGRLDRKW+GTSAPA +EVKI EV EER R+LGDPL+EEEVAELVE YRH+NCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
Subjt:  SPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN

Query:  IFFHLEFLSRTSLVGR
        I FHLE  S   ++ R
Subjt:  IFFHLEFLSRTSLVGR

A0A6J1IH58 CRS2-associated factor 2, mitochondrial2.7e-9882.57Show/hide
Query:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP
        MAIH RTRIR PDH NQK SGY L I RF SKSLSE  YDPPFSP SKLQK K KK  + NS+S KNPTLP  SDLPFDFFYSYSETNPSV PIG+RESP
Subjt:  MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESP

Query:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM
        KFSPFGPGRLDRKWTGTSAP+EVEVKINEVLEERKR+LGDPL+EEEVAELVE YRHNNCSRQINLGKGGVTHNMLDDIHNHW+RAEAVRIKCLGVPTLDM
Subjt:  KFSPFGPGRLDRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDM

Query:  DNIFFHLEFLSRTSLVGR
        +NI FHLE  S   ++ R
Subjt:  DNIFFHLEFLSRTSLVGR

SwissProt top hitse value%identityAlignment
Q0J7J7 CRS2-associated factor 2, mitochondrial4.3e-5662.15Show/hide
Query:  SESSYDPPFSPASK---LQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEVL
        S+   DPPF+  ++       K KK    +      P  P  SDLPFDF YSYSET+P+ +PIGFRE  +FSPFGPGRLDR W G +A A          
Subjt:  SESSYDPPFSPASK---LQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEVL

Query:  EERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLE
          R+ VLG+PL EEEVA+LVE YRH++CSRQINLGKGGVTHNM+DDIHNHWKRAEAVRIKCLGVPTLDMDNI FHLE
Subjt:  EERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLE

Q6Z4U2 CRS2-associated factor 1, mitochondrial6.2e-3947.09Show/hide
Query:  RFLSKSLSESSYDPPFS---------PASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTS
        R LS  L    + PP S           +K ++PK K  +   SS ++      +SDLPFDF +SY+E++P  KPIG RE PK+SPFGPGRLDR WTG  
Subjt:  RFLSKSLSESSYDPPFS---------PASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTS

Query:  APA---------------EVEVKINEV-LEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
        APA                 E ++ E    ER+RVLG+PLT  E A LV   + +   +QINLG+ G+THNML+DIHNHWK  EAVR+KCLGVPT+DM N
Subjt:  APA---------------EVEVKINEV-LEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN

Query:  IFFHLE
        +   LE
Subjt:  IFFHLE

Q84N49 CRS2-associated factor 1, chloroplastic1.3e-2340.49Show/hide
Query:  PFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTS------------------APAEVEVKINE-------------VLEERKRVLGDPLTEE
        PF+F YSY+E  P  +P+  RE+P F PFGP    R WTG                    AP +  VK  +                 R+ +LG+PLT+E
Subjt:  PFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTS------------------APAEVEVKINE-------------VLEERKRVLGDPLTEE

Query:  EVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLE
        EV+ELV+        RQ+N+G+ G+THNML++IH+HWKR    +IKC GV T+DMDNI   LE
Subjt:  EVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLE

Q8VYD9 CRS2-associated factor 1, mitochondrial2.7e-4245.81Show/hide
Query:  IRLPDHSNQKPSGYLLLISRFLSKSLSES--------SYDPPFSPASKLQKPKNKKTHNRNS-------SSNKNPTLPFQSDLPFDFFYSYSETNPSVKP
        IRL  H+   PS + LL  R   +++S S           PP S ++      N+K +N+          S+        SDLPFDF +SY+E+  +V+P
Subjt:  IRLPDHSNQKPSGYLLLISRFLSKSLSES--------SYDPPFSPASKLQKPKNKKTHNRNS-------SSNKNPTLPFQSDLPFDFFYSYSETNPSVKP

Query:  IGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEV-------LEERKR-----VLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNH
        IG RE PK+SPFGP RLDR+WTG  APA V  K+  V       LEE++R     + G  LTE E   LVEL + N   RQ+NLG+ G+THNML+D++NH
Subjt:  IGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEV-------LEERKR-----VLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNH

Query:  WKRAEAVRIKCLGVPTLDMDNIFFHLE
        WK AEAVR+KCLGVPTLDM N+ FHLE
Subjt:  WKRAEAVRIKCLGVPTLDMDNIFFHLE

Q9FFU1 CRS2-associated factor 2, mitochondrial1.6e-6661.06Show/hide
Query:  QKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKP----KNKKTHNRNSSSN--KNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRL
        ++P    L +    ++ +S   YDPPFSP SK  KP    K +KT  ++ SS    +  +P  SDLPFDF YSYSETNP ++PIGFRE  +FSPFGPGRL
Subjt:  QKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKP----KNKKTHNRNSSSN--KNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRL

Query:  DRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLEFL
        DRKWTGT+A A  E+  ++ +EER RVLG+ LTE+EV EL+E YRH++C+RQINLGKGGVTHNM+DDIHNHWK+AEAVRIKCLGVPTLDMDNI FHLE  
Subjt:  DRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLEFL

Query:  SRTSLVGR
        S   +V R
Subjt:  SRTSLVGR

Arabidopsis top hitse value%identityAlignment
AT1G23400.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein1.5e-2437.57Show/hide
Query:  PFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIN---------------EVLE---------------ERKRVLGDPLTEEE
        PF+F +SYSET P VKP+G RE P F PF P  + R WTG +   + + KI                + +E                R+ VLG+PL   E
Subjt:  PFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKIN---------------EVLE---------------ERKRVLGDPLTEEE

Query:  VAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLEFLSRTSLVGRL
           L++ + H+N  RQ+NLG+ G THNML+ IH+HWKR    +++C GVPT+DM+N+   LE  +   ++ R+
Subjt:  VAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLEFLSRTSLVGRL

AT2G20020.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein6.4e-2334.47Show/hide
Query:  PASKLQKPKNK-KTHNRNSSSNKNPTLPFQSD--------LPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINE------
        P S   +PKNK +  +     +  P +    D         PF+F YSY+ET P VKP+  RE P ++PFGP  + R WTG +   + +    E      
Subjt:  PASKLQKPKNK-KTHNRNSSSNKNPTLPFQSD--------LPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINE------

Query:  ------------------------VLEERKRVLGDPLTEEEVAELVELYRHNNC---SRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN
                                 +  ++ +LG+PLT+EEV ELV      +C   +RQ+N+G+ G+THNML++IH+ WKR    +IKC GV T+DMDN
Subjt:  ------------------------VLEERKRVLGDPLTEEEVAELVELYRHNNC---SRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDN

Query:  IFFHLE
        +   LE
Subjt:  IFFHLE

AT4G31010.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein1.9e-4345.81Show/hide
Query:  IRLPDHSNQKPSGYLLLISRFLSKSLSES--------SYDPPFSPASKLQKPKNKKTHNRNS-------SSNKNPTLPFQSDLPFDFFYSYSETNPSVKP
        IRL  H+   PS + LL  R   +++S S           PP S ++      N+K +N+          S+        SDLPFDF +SY+E+  +V+P
Subjt:  IRLPDHSNQKPSGYLLLISRFLSKSLSES--------SYDPPFSPASKLQKPKNKKTHNRNS-------SSNKNPTLPFQSDLPFDFFYSYSETNPSVKP

Query:  IGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEV-------LEERKR-----VLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNH
        IG RE PK+SPFGP RLDR+WTG  APA V  K+  V       LEE++R     + G  LTE E   LVEL + N   RQ+NLG+ G+THNML+D++NH
Subjt:  IGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEV-------LEERKR-----VLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNH

Query:  WKRAEAVRIKCLGVPTLDMDNIFFHLE
        WK AEAVR+KCLGVPTLDM N+ FHLE
Subjt:  WKRAEAVRIKCLGVPTLDMDNIFFHLE

AT4G31010.2 RNA-binding CRS1 / YhbY (CRM) domain-containing protein1.9e-4345.81Show/hide
Query:  IRLPDHSNQKPSGYLLLISRFLSKSLSES--------SYDPPFSPASKLQKPKNKKTHNRNS-------SSNKNPTLPFQSDLPFDFFYSYSETNPSVKP
        IRL  H+   PS + LL  R   +++S S           PP S ++      N+K +N+          S+        SDLPFDF +SY+E+  +V+P
Subjt:  IRLPDHSNQKPSGYLLLISRFLSKSLSES--------SYDPPFSPASKLQKPKNKKTHNRNS-------SSNKNPTLPFQSDLPFDFFYSYSETNPSVKP

Query:  IGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEV-------LEERKR-----VLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNH
        IG RE PK+SPFGP RLDR+WTG  APA V  K+  V       LEE++R     + G  LTE E   LVEL + N   RQ+NLG+ G+THNML+D++NH
Subjt:  IGFRESPKFSPFGPGRLDRKWTGTSAPAEVEVKINEV-------LEERKR-----VLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNH

Query:  WKRAEAVRIKCLGVPTLDMDNIFFHLE
        WK AEAVR+KCLGVPTLDM N+ FHLE
Subjt:  WKRAEAVRIKCLGVPTLDMDNIFFHLE

AT5G54890.1 RNA-binding CRS1 / YhbY (CRM) domain-containing protein1.1e-6761.06Show/hide
Query:  QKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKP----KNKKTHNRNSSSN--KNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRL
        ++P    L +    ++ +S   YDPPFSP SK  KP    K +KT  ++ SS    +  +P  SDLPFDF YSYSETNP ++PIGFRE  +FSPFGPGRL
Subjt:  QKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKP----KNKKTHNRNSSSN--KNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRL

Query:  DRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLEFL
        DRKWTGT+A A  E+  ++ +EER RVLG+ LTE+EV EL+E YRH++C+RQINLGKGGVTHNM+DDIHNHWK+AEAVRIKCLGVPTLDMDNI FHLE  
Subjt:  DRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLEFL

Query:  SRTSLVGR
        S   +V R
Subjt:  SRTSLVGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCATTTCCGAACCCGGATCAGACTTCCAGATCATTCAAACCAGAAACCCAGTGGCTATTTACTCTTGATTTCTCGATTTCTCTCCAAATCTCTGTCCGAAAG
CTCTTACGATCCTCCATTTTCGCCTGCTTCCAAGCTCCAAAAACCAAAAAACAAGAAGACCCACAATAGAAATTCGAGTTCAAACAAAAACCCCACTCTCCCTTTCCAGT
CGGATCTTCCTTTCGACTTCTTCTACTCCTACTCTGAGACCAATCCCTCAGTTAAACCTATAGGCTTTCGAGAATCGCCCAAATTCTCACCGTTTGGCCCGGGCCGACTC
GACCGGAAATGGACCGGAACTTCGGCCCCTGCGGAGGTGGAAGTAAAGATCAATGAAGTGTTAGAGGAGAGGAAACGGGTTCTTGGAGATCCATTAACGGAGGAGGAAGT
TGCAGAGCTTGTGGAACTGTATCGGCATAACAATTGCTCTCGCCAAATCAATCTTGGAAAAGGGGGAGTTACTCACAACATGTTGGATGACATACACAACCATTGGAAAA
GGGCTGAAGCTGTGAGGATCAAGTGCTTGGGAGTGCCAACTCTTGATATGGACAATATATTTTTCCACCTTGAGTTTCTCTCTAGGACAAGTCTGGTGGGAAGATTATAT
ATCGACATATCAATGTCCTTCTTTTATACCGTGGTCGAAACTATGACCCCAAGAATCGACCAGCTATCCCTCTTATGTTGTGGAAACCTTATGCTCCAATATATCCAAAG
CTTGTGA
mRNA sequenceShow/hide mRNA sequence
GGCTGATACACAAATGTGAACTGCACTGATAATTTAACCTTCTCTCCTCTACCTCCTGCAAGACTACAACTTCATCGAGCTGCCGAAAATGGCGATTCATTTCCGAACCC
GGATCAGACTTCCAGATCATTCAAACCAGAAACCCAGTGGCTATTTACTCTTGATTTCTCGATTTCTCTCCAAATCTCTGTCCGAAAGCTCTTACGATCCTCCATTTTCG
CCTGCTTCCAAGCTCCAAAAACCAAAAAACAAGAAGACCCACAATAGAAATTCGAGTTCAAACAAAAACCCCACTCTCCCTTTCCAGTCGGATCTTCCTTTCGACTTCTT
CTACTCCTACTCTGAGACCAATCCCTCAGTTAAACCTATAGGCTTTCGAGAATCGCCCAAATTCTCACCGTTTGGCCCGGGCCGACTCGACCGGAAATGGACCGGAACTT
CGGCCCCTGCGGAGGTGGAAGTAAAGATCAATGAAGTGTTAGAGGAGAGGAAACGGGTTCTTGGAGATCCATTAACGGAGGAGGAAGTTGCAGAGCTTGTGGAACTGTAT
CGGCATAACAATTGCTCTCGCCAAATCAATCTTGGAAAAGGGGGAGTTACTCACAACATGTTGGATGACATACACAACCATTGGAAAAGGGCTGAAGCTGTGAGGATCAA
GTGCTTGGGAGTGCCAACTCTTGATATGGACAATATATTTTTCCACCTTGAGTTTCTCTCTAGGACAAGTCTGGTGGGAAGATTATATATCGACATATCAATGTCCTTCT
TTTATACCGTGGTCGAAACTATGACCCCAAGAATCGACCAGCTATCCCTCTTATGTTGTGGAAACCTTATGCTCCAATATATCCAAAGCTTGTGAAGAATGTGGCTAATG
GCTTGTCATTTGAAGAAACAAAGGAAATGAGAAGCAGAGGATTGAATTCTCCTCCTCTAATGAAACTTAGTGAGTAAATGTTGGTTAGCAAGGAATGGTGTATATGTTAA
TGTCGTGGAGAGAGTGAGAGAGGCCTTCGAGTTCGAGGAGGTGGTTAGACTAGATTGCACTCATGTTGGTAGCAGTGACTGCAAACAAATAGGTGTTAAATTAAGGGATT
TGGTACCTTGTGTGCCTATTTTGTTCAAGGATGAGCAGATTATACTATGGAGAGGGAAGAAAGATGGTGAGGAGAACACAAACTCGTAGATGGTGGATTTCGATCTTCGG
AAACATGCGCGTGGAACTTACAGTATCTGCTATGGATGATGTTACAGATAATGCAGATGATTTTTCTTCTAGGATGCGCAAATTATACTGTGGAGAGGGAAGAGAGATCA
TGAAGAGACCATGAATTCGATGTCGAGAGAATAGGTAGTGGAAATGTAAACTGTAATGGTGCTCCAATCTAGAATGAGTTTTGAGGATTTGTTGAATCTCATTTATGACC
CCCTTAGGGATGTGTTGTAACTCGAAGCTGAGCATCTTGTCTAATCTCAATTATTTCTACTGTGAATCTAAACTTCAACACCTTTGATTAATACCATGCCAACAACTGAC
ATCAAATCTTGGTATAGCTTGAAATGAGAGGGTTAAATTACAAATTTGGTCCCTATGGATTAAAGAAAGTTAGAATTTAGTCTCTATAGTCTGATAAATCCAGTTACACA
ACACAAATTTGGATCAAGATACTTAGTACCTTCAAATTACAGACTGCTCTTCCAAATAAGATGGCGGTGCTTCTTGAGTCTCTTCTCATTGGACATCCTTTTAGATGGGA
AAAAGCTTGCATCTGGGGCTTTTTTATAAAAGCGTTGTTTTGGTCCGTCTGGATTGAGAGAAACAACAGGATCTTCACTGAATGTGCCCGAAATCAACACAATTTATTCG
ATGTTATTACTTTCTTAGCTACTTCTTGGTGTAAATTAACCTCTCATTTTTGTGACTACAGTCTCAC
Protein sequenceShow/hide protein sequence
MAIHFRTRIRLPDHSNQKPSGYLLLISRFLSKSLSESSYDPPFSPASKLQKPKNKKTHNRNSSSNKNPTLPFQSDLPFDFFYSYSETNPSVKPIGFRESPKFSPFGPGRL
DRKWTGTSAPAEVEVKINEVLEERKRVLGDPLTEEEVAELVELYRHNNCSRQINLGKGGVTHNMLDDIHNHWKRAEAVRIKCLGVPTLDMDNIFFHLEFLSRTSLVGRLY
IDISMSFFYTVVETMTPRIDQLSLLCCGNLMLQYIQSL