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Tan0005972 (gene) of Snake gourd v1 genome

Gene IDTan0005972
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG11:14794379..14794867
RNA-Seq ExpressionTan0005972
SyntenyTan0005972
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154925.1 uncharacterized protein LOC111022071 [Momordica charantia]5.8e-0828.06Show/hide
Query:  MKEIMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETISMCDEPIPTI
        +K I+V  ++T+ +LK RL+ ++KV Q+ +DL++ V Y L    PP+++ DDDD++F L Q ++S++ + + TIP +     + I +  ++   E     
Subjt:  MKEIMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETISMCDEPIPTI

Query:  DIPPVVSLENDGNDLWVTSDINWAIKQIGIRTMFSMNTK
         IP   S+  +G+    T    W +  + ++ M+S + +
Subjt:  DIPPVVSLENDGNDLWVTSDINWAIKQIGIRTMFSMNTK

XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]6.4e-0731.01Show/hide
Query:  IMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETI-------------
        I+V  S+ + ++K  +Y V  VS S FDLIL V+Y L    PP YI +DD ++FLL + +LS+L + +    + D  + +   N +              
Subjt:  IMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETI-------------

Query:  ----SMCDEPIPTIDIPPVVSLENDGNDL
               D P+ T  +P ++SL+ND  +L
Subjt:  ----SMCDEPIPTIDIPPVVSLENDGNDL

XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]6.4e-0731.01Show/hide
Query:  IMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETI-------------
        I+V  S+ + ++K  +Y V  VS S FDLIL V+Y L    PP YI +DD ++FLL + +LS+L + +    + D  + +   N +              
Subjt:  IMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETI-------------

Query:  ----SMCDEPIPTIDIPPVVSLENDGNDL
               D P+ T  +P ++SL+ND  +L
Subjt:  ----SMCDEPIPTIDIPPVVSLENDGNDL

XP_038904780.1 uncharacterized protein LOC120091048 [Benincasa hispida]5.8e-0845.57Show/hide
Query:  SITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGN
        ++ + +LK  +Y   KVS S FDLIL V+Y+L    PP +I DDDDV FLL + ELS+L I +     QD  V +  GN
Subjt:  SITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGN

TrEMBL top hitse value%identityAlignment
A0A6J1DL08 uncharacterized protein LOC1110220712.8e-0828.06Show/hide
Query:  MKEIMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETISMCDEPIPTI
        +K I+V  ++T+ +LK RL+ ++KV Q+ +DL++ V Y L    PP+++ DDDD++F L Q ++S++ + + TIP +     + I +  ++   E     
Subjt:  MKEIMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETISMCDEPIPTI

Query:  DIPPVVSLENDGNDLWVTSDINWAIKQIGIRTMFSMNTK
         IP   S+  +G+    T    W +  + ++ M+S + +
Subjt:  DIPPVVSLENDGNDLWVTSDINWAIKQIGIRTMFSMNTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAATTATGGTGTCGAGCTCCATAACGTTCCACCAATTGAAAGAACGATTGTACAACGTTGTTAAAGTTAGTCAATCCGCGTTCGATCTTATACTTGGGGTACA
GTATAGTTTGACGGGAGGATTACCTCCAATTTACATCGAGGATGACGATGACGTTCAATTCCTTCTACAACAATTCGAGTTATCACAATTGTCAATTTGCATGCAGACAA
TACCATCTCAAGACAGATATGTGGACGTTGTAATTGGTAATGAAACAATATCAATGTGTGATGAACCGATTCCAACAATCGACATCCCGCCCGTTGTATCCTTAGAGAAC
GATGGCAATGATCTATGGGTCACGTCGGACATCAATTGGGCGATCAAACAGATTGGGATTCGAACGATGTTTTCCATGAATACCAAGCGGATGGAACATCAACTGTATAT
ACACAACCATCAGAATTTGATTTTGAAGATATACCACTACCCACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAAATTATGGTGTCGAGCTCCATAACGTTCCACCAATTGAAAGAACGATTGTACAACGTTGTTAAAGTTAGTCAATCCGCGTTCGATCTTATACTTGGGGTACA
GTATAGTTTGACGGGAGGATTACCTCCAATTTACATCGAGGATGACGATGACGTTCAATTCCTTCTACAACAATTCGAGTTATCACAATTGTCAATTTGCATGCAGACAA
TACCATCTCAAGACAGATATGTGGACGTTGTAATTGGTAATGAAACAATATCAATGTGTGATGAACCGATTCCAACAATCGACATCCCGCCCGTTGTATCCTTAGAGAAC
GATGGCAATGATCTATGGGTCACGTCGGACATCAATTGGGCGATCAAACAGATTGGGATTCGAACGATGTTTTCCATGAATACCAAGCGGATGGAACATCAACTGTATAT
ACACAACCATCAGAATTTGATTTTGAAGATATACCACTACCCACTGTAA
Protein sequenceShow/hide protein sequence
MKEIMVSSSITFHQLKERLYNVVKVSQSAFDLILGVQYSLTGGLPPIYIEDDDDVQFLLQQFELSQLSICMQTIPSQDRYVDVVIGNETISMCDEPIPTIDIPPVVSLEN
DGNDLWVTSDINWAIKQIGIRTMFSMNTKRMEHQLYIHNHQNLILKIYHYPL