CuGenDBv2

Gene ID	Tan0005994
Organism	Trichosanthes anguina (Snake gourd v1)
Description	light-harvesting complex-like protein 3 isotype 1, chloroplastic
Genome location	LG01:24111600..24122222
RNA-Seq Expression	Tan0005994
Synteny	Tan0005994
Gene Ontology terms	GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0046872 - metal ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0041046.1 uncharacterized protein E6C27_scaffold477G00170 [Cucumis melo var. makuwa]

2.1e-167

77.91

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSP SHLSTLSPSS+H   FSF+ FSSLR RN  SSSSSSSLF+IRA A+NGAGISGGSA V+VETPVEQKDPEPA      +ES+AGTNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGKEVSMKMFLLVFLEICFSGFNFCDEPCYQFQLK
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE +SGSGK                                
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGKEVSMKMFLLVFLEICFSGFNFCDEPCYQFQLK

Query:  QNPKNPFLLCKSSCEENLARVSKENKVVVTVYSEKQEPRLAVNPYKRDDVNKAVRNQWKQDTANKGYNRRTELLKYSQQLRRSARSPASPYIRTPEPISL
                +C+ + +   A VSKENKV+VTVYSEKQEPRL VN Y+R +VNK VRNQWKQDTANKGYNRRTELLKYSQ+LR+SARSPASPYIRTPEPI L
Subjt:  QNPKNPFLLCKSSCEENLARVSKENKVVVTVYSEKQEPRLAVNPYKRDDVNKAVRNQWKQDTANKGYNRRTELLKYSQQLRRSARSPASPYIRTPEPISL

Query:  RNKQPIARNIAINLVCSSFSV
        +NKQPIAR+IAINLVC+SFS+
Subjt:  RNKQPIARNIAINLVCSSFSV

XP_004147237.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucumis sativus]

4.0e-126

90.64

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSP SHLST SP S+H   FSF+ FSSLR RN   SSSSSSLF+IRA A+NGAGISGGSA VSVETPVEQKDPEPAK APE+QES+AGTNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE SGSGK
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK

XP_008448777.1 PREDICTED: uncharacterized protein LOC103490842 [Cucumis melo]

9.2e-123

89.18

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSP SHLSTLSPSS+H   FSF+ FSSLR RN  SSSSSSSLF+IRA A+NGAGISGGSA V+VETPVEQKDPEPA      +ES+AGTNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGK
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE +SGSGK
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGK

XP_022965154.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Cucurbita maxima]

8.7e-113

83.08

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSPPS LS+LSPSS+HR  F  + FSSLR+RN SS            AA+NGAGISGGS  V+VE  V QKDPEP   A E +ES+A TNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
         EEV VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSI+PWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  AEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE  GSGK
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK

XP_038906355.1 light-harvesting complex-like protein 3 isotype 1, chloroplastic [Benincasa hispida]

1.5e-128

90.6

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSP SHLSTLSPSS+HR  FSF+ FSSLR RN     SSSSLF+IRA A+NGAGISGGSAAV+VETPVEQKDPEPAKA  E+QES+AGTNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
        AEEVEVVSKFEDPKW+NGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
Subjt:  AEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE SGSGK
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L5D8 Uncharacterized protein

1.9e-126

90.64

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSP SHLST SP S+H   FSF+ FSSLR RN   SSSSSSLF+IRA A+NGAGISGGSA VSVETPVEQKDPEPAK APE+QES+AGTNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE SGSGK
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK

A0A1S3BLD8 uncharacterized protein LOC103490842

4.5e-123

89.18

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSP SHLSTLSPSS+H   FSF+ FSSLR RN  SSSSSSSLF+IRA A+NGAGISGGSA V+VETPVEQKDPEPA      +ES+AGTNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGK
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE +SGSGK
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGK

A0A5A7TG76 Uncharacterized protein

1.0e-167

77.91

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSP SHLSTLSPSS+H   FSF+ FSSLR RN  SSSSSSSLF+IRA A+NGAGISGGSA V+VETPVEQKDPEPA      +ES+AGTNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
        AEE VEVVSKFEDPKWVNGTWDLNQF+K+GSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSI+PWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV
Subjt:  AEE-VEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFV

Query:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGKEVSMKMFLLVFLEICFSGFNFCDEPCYQFQLK
        DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE +SGSGK                                
Subjt:  DSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE-ASGSGKEVSMKMFLLVFLEICFSGFNFCDEPCYQFQLK

Query:  QNPKNPFLLCKSSCEENLARVSKENKVVVTVYSEKQEPRLAVNPYKRDDVNKAVRNQWKQDTANKGYNRRTELLKYSQQLRRSARSPASPYIRTPEPISL
                +C+ + +   A VSKENKV+VTVYSEKQEPRL VN Y+R +VNK VRNQWKQDTANKGYNRRTELLKYSQ+LR+SARSPASPYIRTPEPI L
Subjt:  QNPKNPFLLCKSSCEENLARVSKENKVVVTVYSEKQEPRLAVNPYKRDDVNKAVRNQWKQDTANKGYNRRTELLKYSQQLRRSARSPASPYIRTPEPISL

Query:  RNKQPIARNIAINLVCSSFSV
        +NKQPIAR+IAINLVC+SFS+
Subjt:  RNKQPIARNIAINLVCSSFSV

A0A6J1DPN2 light-harvesting complex-like protein 3 isotype 1, chloroplastic

7.2e-113

83.71

Show/hide

Query:  SSSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESI-AGTNGSV
        SSSMALFSPPSH STLSPSS HR  FSF  F SLR RN        +  +IRAAA+NGAGI   SAAV+VET V+ KDPE     PE+QES+ AG NGSV
Subjt:  SSSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESI-AGTNGSV

Query:  AAAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYF
        AAAEEVEVVSKFEDPKWVNGTWDL QFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVF++SIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYF
Subjt:  AAAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYF

Query:  VDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEAS
        VDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIET+K+LIDETTFYDKQWQATWQDE S
Subjt:  VDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEAS

A0A6J1HQ78 light-harvesting complex-like protein 3 isotype 1, chloroplastic

4.2e-113

83.08

Show/hide

Query:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA
        SSMALFSPPS LS+LSPSS+HR  F  + FSSLR+RN SS            AA+NGAGISGGS  V+VE  V QKDPEP   A E +ES+A TNGSVAA
Subjt:  SSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAA

Query:  AEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD
         EEV VVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPV+FDTSI+PWWAWIKRYHLPEAE+LNGRAAMVGFFMAYFVD
Subjt:  AEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVD

Query:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK
        SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDE  GSGK
Subjt:  SLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGK

SwissProt top hits

e value

%identity

Alignment

Q6NKS4 Light-harvesting complex-like protein 3 isotype 2, chloroplastic

5.3e-73

57.25

Show/hide

Query:  MSSSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSI-RAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIA--GTN
        MS SMALFSPP   S  +P+   + S S              S+   SL S+ RA+++NG      S  V +  P      E    +P +  S +  G  
Subjt:  MSSSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSI-RAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIA--GTN

Query:  GSVAAAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFM
        G  A     E V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSIIPWWAW+KRYHLPEAELLNGRAAM+GFFM
Subjt:  GSVAAAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFM

Query:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGS
        AYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGS

Q9SYX1 Light-harvesting complex-like protein 3 isotype 1, chloroplastic

6.5e-79

60.58

Show/hide

Query:  MALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETP----VEQKDPEPAKAAPEDQESIAGTNGSV
        MALFSPP   S+L  + N    FSF L SS R   LS + +SS            +G +  +AAVSVE P    V  K+P  +  A + +E+    N +V
Subjt:  MALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETP----VEQKDPEPAKAAPEDQESIAGTNGSV

Query:  AAAE--EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMA
           E    E V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSIIPWWAWIKRYHLPEAELLNGRAAM+GFFMA
Subjt:  AAAE--EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DEASGSGKE
        YFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K+
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DEASGSGKE

Arabidopsis top hits

e value

%identity

Alignment

AT4G17600.1 Chlorophyll A-B binding family protein

4.6e-80

60.58

Show/hide

Query:  MALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETP----VEQKDPEPAKAAPEDQESIAGTNGSV
        MALFSPP   S+L  + N    FSF L SS R   LS + +SS            +G +  +AAVSVE P    V  K+P  +  A + +E+    N +V
Subjt:  MALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETP----VEQKDPEPAKAAPEDQESIAGTNGSV

Query:  AAAE--EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMA
           E    E V KF+D +W+NGTWDL QF KDG TDWD+VI AEA+RRKWLE NPE++SN++PV+FDTSIIPWWAWIKRYHLPEAELLNGRAAM+GFFMA
Subjt:  AAAE--EVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMA

Query:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DEASGSGKE
        YFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W+   DE+ GS K+
Subjt:  YFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQ---DEASGSGKE

AT5G47110.1 Chlorophyll A-B binding family protein

3.8e-74

57.25

Show/hide

Query:  MSSSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSI-RAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIA--GTN
        MS SMALFSPP   S  +P+   + S S              S+   SL S+ RA+++NG      S  V +  P      E    +P +  S +  G  
Subjt:  MSSSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSI-RAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIA--GTN

Query:  GSVAAAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFM
        G  A     E V K+++ KWVNGTWDL QF KDG TDWD+VI +EA+RRKWLE+NPE++SN++ VVFDTSIIPWWAW+KRYHLPEAELLNGRAAM+GFFM
Subjt:  GSVAAAEEVEVVSKFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFM

Query:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGS
        AYFVDSLTGVGLV QMGNFFCKTLLFVAV GVL IRKNED++ LK L DETT YDKQWQA W++  S +
Subjt:  AYFVDSLTGVGLVGQMGNFFCKTLLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGS

Sequences

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CDS sequence

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ATGTCTTCTTCCATGGCATTGTTTTCTCCTCCTTCCCATCTCTCTACTCTCTCTCCTTCTTCAAACCACAGAAATTCCTTCTCCTTCAAACTCTTTTCTTCTCTTAGAGC
CAGAAACCTTTCTTCTTCTTCTTCTTCTTCTTCTCTCTTCTCCATCAGGGCTGCTGCTGAAAATGGCGCCGGAATTTCAGGTGGTTCGGCCGCCGTTTCTGTAGAAACCC
CCGTCGAACAGAAGGATCCGGAGCCAGCTAAGGCTGCACCGGAAGACCAGGAGAGCATCGCCGGAACCAATGGCTCGGTGGCGGCTGCTGAAGAAGTGGAGGTGGTTAGC
AAATTTGAAGACCCTAAATGGGTTAATGGGACTTGGGATCTGAATCAGTTCCGGAAAGATGGAAGTACTGATTGGGATGCTGTTATTGATGCCGAGGCTAGGAGGAGAAA
ATGGCTGGAAAACAATCCAGAATCATCAAGTAATGAGGACCCTGTGGTATTTGACACATCCATAATTCCTTGGTGGGCTTGGATTAAGCGCTACCATCTCCCTGAGGCTG
AGCTACTCAATGGCCGTGCAGCCATGGTGGGGTTCTTCATGGCTTACTTTGTTGATAGCTTGACTGGGGTAGGACTAGTAGGTCAAATGGGCAACTTCTTCTGCAAAACC
TTGTTATTTGTAGCTGTTGTGGGAGTTCTTTTGATCAGAAAGAATGAAGATATAGAGACTCTAAAGAAGTTGATTGATGAGACAACATTTTATGACAAGCAATGGCAAGC
AACTTGGCAGGATGAAGCCTCAGGCTCAGGCAAAGAGGTTTCAATGAAAATGTTTCTCTTGGTTTTTCTGGAAATATGCTTTTCAGGGTTCAACTTTTGTGATGAACCTT
GTTATCAGTTTCAGCTCAAGCAGAACCCAAAAAATCCATTTCTGTTGTGCAAGTCTTCATGCGAGGAAAACTTGGCAAGGGTCTCAAAAGAGAACAAAGTGGTGGTGACT
GTGTATTCAGAGAAGCAAGAACCAAGACTAGCAGTGAATCCTTACAAACGTGATGATGTGAACAAAGCAGTGAGAAATCAATGGAAGCAAGATACAGCTAATAAAGGATA
CAATAGGAGAACTGAGCTCCTCAAGTACTCTCAACAGCTTCGAAGGTCTGCGCGATCACCTGCATCTCCATATATCCGAACTCCGGAGCCAATTTCTTTAAGGAACAAGC
AACCGATCGCAAGAAACATAGCGATTAATCTTGTATGCTCTTCCTTTTCTGTAAGTTTGCATATTGATTCACAAAGCAATCACATTTATCTTCTTGTCCTAGCAAGAAAG
TGTGATAATCAATCTAGTTTTTTTTCTTCTTTAGAACTCAAGTACACAGTTGCACAACCTATAGAAGAGGTCCGGTTCAAAGTGGTATAA

mRNA sequence

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Protein sequence

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MSSSMALFSPPSHLSTLSPSSNHRNSFSFKLFSSLRARNLSSSSSSSSLFSIRAAAENGAGISGGSAAVSVETPVEQKDPEPAKAAPEDQESIAGTNGSVAAAEEVEVVS
KFEDPKWVNGTWDLNQFRKDGSTDWDAVIDAEARRRKWLENNPESSSNEDPVVFDTSIIPWWAWIKRYHLPEAELLNGRAAMVGFFMAYFVDSLTGVGLVGQMGNFFCKT
LLFVAVVGVLLIRKNEDIETLKKLIDETTFYDKQWQATWQDEASGSGKEVSMKMFLLVFLEICFSGFNFCDEPCYQFQLKQNPKNPFLLCKSSCEENLARVSKENKVVVT
VYSEKQEPRLAVNPYKRDDVNKAVRNQWKQDTANKGYNRRTELLKYSQQLRRSARSPASPYIRTPEPISLRNKQPIARNIAINLVCSSFSVSLHIDSQSNHIYLLVLARK
CDNQSSFFSSLELKYTVAQPIEEVRFKVV

Tan0005994 (gene) of Snake gourd v1 genome