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Tan0005998 (gene) of Snake gourd v1 genome

Gene IDTan0005998
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein RALF-like 33
Genome locationLG10:8858145..8858513
RNA-Seq ExpressionTan0005998
SyntenyTan0005998
Gene Ontology termsNA
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KDP27792.1 hypothetical protein JCGZ_18872 [Jatropha curcas]5.7e-2456.45Show/hide
Query:  MRSSNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEF--QFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGES
        M SS  +G L+IC I A + A+SSS+    F  +P  S CR    SIA  +C+I G+++F  +FA+  EI+RRILA TR YISY A+ RNSVPCSRRG S
Subjt:  MRSSNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEF--QFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGES

Query:  YYNCRLGAPANPYSQGCSGIARCR
        YYNCR GA ANPYS+GC+ I RCR
Subjt:  YYNCRLGAPANPYSQGCSGIARCR

RXI01818.1 hypothetical protein DVH24_015167 [Malus domestica]3.7e-2349.58Show/hide
Query:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR
        +++H F ++  I AS L + SS GD+  L   P +  +S S   + ++C +   D+ +F +  EISRRILATT +YISY A+ RN+VPCSRRG SYYNC+
Subjt:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR

Query:  LGAPANPYSQGCSGIARCR
         GA ANPY++GCS I RCR
Subjt:  LGAPANPYSQGCSGIARCR

TQE05139.1 hypothetical protein C1H46_009291 [Malus baccata]2.8e-2350.42Show/hide
Query:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR
        +++H F ++  I AS L + SS GD+  L   P +  +S S   + ++C +   D+ +F +  EISRRILATT +YISY A+ RN+VPCSRRG SYYNC+
Subjt:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR

Query:  LGAPANPYSQGCSGIARCR
         GA ANPYS+GCS I RCR
Subjt:  LGAPANPYSQGCSGIARCR

XP_022138185.1 protein RALF-like 33 [Momordica charantia]1.1e-3263.78Show/hide
Query:  MRSSNIHGFLVICTISASYLALSSS-----TGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRR
        M +S IHGFL++C ISASYL LSSS     TGDRQFL LPP SACR        ++C++GG D FQFA    +  RILAT  RYISY A+ RN+VPCSRR
Subjt:  MRSSNIHGFLVICTISASYLALSSS-----TGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRR

Query:  GESYYNCRLGAPANPYSQGCSGIARCR
        G SYYNCR GAPANPYS+GCS I RCR
Subjt:  GESYYNCRLGAPANPYSQGCSGIARCR

XP_039001684.1 protein RALF-like 33 [Hibiscus syriacus]3.7e-2357.81Show/hide
Query:  MRSSNIHGFLVICTISASYLALSSSTGDRQFL--HLPPVSACRSGSESIADSDCMIGGED----EFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSR
        MR S I  FL IC I A ++A+S+S+    F   H  P+ +  SG  SIA+   M GGED    E +FA+  EISRRILATT RYISY A+ RN+VPCSR
Subjt:  MRSSNIHGFLVICTISASYLALSSSTGDRQFL--HLPPVSACRSGSESIADSDCMIGGED----EFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSR

Query:  RGESYYNCRLGAPANPYSQGCSGIARCR
        RG SYYNCR GA ANPYS+GCS I RCR
Subjt:  RGESYYNCRLGAPANPYSQGCSGIARCR

TrEMBL top hitse value%identityAlignment
A0A067JV88 Uncharacterized protein2.8e-2456.45Show/hide
Query:  MRSSNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEF--QFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGES
        M SS  +G L+IC I A + A+SSS+    F  +P  S CR    SIA  +C+I G+++F  +FA+  EI+RRILA TR YISY A+ RNSVPCSRRG S
Subjt:  MRSSNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEF--QFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGES

Query:  YYNCRLGAPANPYSQGCSGIARCR
        YYNCR GA ANPYS+GC+ I RCR
Subjt:  YYNCRLGAPANPYSQGCSGIARCR

A0A498K379 Uncharacterized protein1.8e-2349.58Show/hide
Query:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR
        +++H F ++  I AS L + SS GD+  L   P +  +S S   + ++C +   D+ +F +  EISRRILATT +YISY A+ RN+VPCSRRG SYYNC+
Subjt:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR

Query:  LGAPANPYSQGCSGIARCR
         GA ANPY++GCS I RCR
Subjt:  LGAPANPYSQGCSGIARCR

A0A540N292 Uncharacterized protein1.4e-2350.42Show/hide
Query:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR
        +++H F ++  I AS L + SS GD+  L   P +  +S S   + ++C +   D+ +F +  EISRRILATT +YISY A+ RN+VPCSRRG SYYNC+
Subjt:  SNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCR

Query:  LGAPANPYSQGCSGIARCR
         GA ANPYS+GCS I RCR
Subjt:  LGAPANPYSQGCSGIARCR

A0A6A3AFV4 Rapid alkalinization factor 231.8e-2357.81Show/hide
Query:  MRSSNIHGFLVICTISASYLALSSSTGDRQFL--HLPPVSACRSGSESIADSDCMIGGED----EFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSR
        MR S I  FL IC I A ++A+S+S+    F   H  P+ +  SG  SIA+   M GGED    E +FA+  EISRRILATT RYISY A+ RN+VPCSR
Subjt:  MRSSNIHGFLVICTISASYLALSSSTGDRQFL--HLPPVSACRSGSESIADSDCMIGGED----EFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSR

Query:  RGESYYNCRLGAPANPYSQGCSGIARCR
        RG SYYNCR GA ANPYS+GCS I RCR
Subjt:  RGESYYNCRLGAPANPYSQGCSGIARCR

A0A6J1C8R0 protein RALF-like 335.5e-3363.78Show/hide
Query:  MRSSNIHGFLVICTISASYLALSSS-----TGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRR
        M +S IHGFL++C ISASYL LSSS     TGDRQFL LPP SACR        ++C++GG D FQFA    +  RILAT  RYISY A+ RN+VPCSRR
Subjt:  MRSSNIHGFLVICTISASYLALSSS-----TGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRR

Query:  GESYYNCRLGAPANPYSQGCSGIARCR
        G SYYNCR GAPANPYS+GCS I RCR
Subjt:  GESYYNCRLGAPANPYSQGCSGIARCR

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 335.7e-1949.12Show/hide
Query:  LVICTISASYLALSS-STGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPA
        + I T+   + A++S S+GD     +P  S C         ++C +   +E +F +  EI+RRILATT +YISY A+ RN+VPCSRRG SYYNCR GA A
Subjt:  LVICTISASYLALSS-STGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPA

Query:  NPYSQGCSGIARCR
        NPYS+GCS I RCR
Subjt:  NPYSQGCSGIARCR

Q945T0 Rapid alkalinization factor2.8e-1846.02Show/hide
Query:  LVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPAN
        L++C +  ++    ++ GD        V   RSG          I  E+EF+  +  E +RRILA T++YISY A+ +NSVPCSRRG SYYNC+ GA AN
Subjt:  LVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPAN

Query:  PYSQGCSGIARCR
        PYS+GCS I RCR
Subjt:  PYSQGCSGIARCR

Q9LUS7 Rapid alkalinization factor 232.0e-1947.2Show/hide
Query:  IHGFLVICTISASYLALSSSTGDRQFLHLPPVSACR------SGSESIADSDCMI--GGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGE
        I   L+I  +    +A+SS + +      P  + CR      S S ++ D   +   GGE   +F +  EI+RRILA TRRYISY A+ RN++PCSRRG 
Subjt:  IHGFLVICTISASYLALSSSTGDRQFLHLPPVSACR------SGSESIADSDCMI--GGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGE

Query:  SYYNCRLGAPANPYSQGCSGIARCR
        SYYNCR GA ANPYS+GCS I RCR
Subjt:  SYYNCRLGAPANPYSQGCSGIARCR

Q9MA62 Protein RALF-like 223.7e-1847.15Show/hide
Query:  SNIHGFLVICTISASYLALSSSTGD----RQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESY
        +N      +  I A  ++   STGD      F+     S     + SIA+    I  E+E +F    +ISRRILA  ++YISY AM RNSVPCSRRG SY
Subjt:  SNIHGFLVICTISASYLALSSSTGD----RQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESY

Query:  YNCRLGAPANPYSQGCSGIARCR
        YNC+ GA ANPYS+GCS I RCR
Subjt:  YNCRLGAPANPYSQGCSGIARCR

Q9SRY3 Protein RALF-like 16.3e-1868.12Show/hide
Query:  IGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPANPYSQGCSGIARCR
        IG E+E    +  EI+RRILATT +YISY ++ RNSVPCSRRG SYYNC+ GA ANPYS+GCS IARCR
Subjt:  IGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPANPYSQGCSGIARCR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 14.5e-1968.12Show/hide
Query:  IGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPANPYSQGCSGIARCR
        IG E+E    +  EI+RRILATT +YISY ++ RNSVPCSRRG SYYNC+ GA ANPYS+GCS IARCR
Subjt:  IGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPANPYSQGCSGIARCR

AT1G28270.1 ralf-like 42.3e-1545.88Show/hide
Query:  VSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPANPYSQGCSGIARC
        V+A    ++S  +    IG +DE +  +  E +RR LA  RRYI YDA+ +N+VPCSRRG SYY+C+     NPY +GCS I  C
Subjt:  VSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPANPYSQGCSGIARC

AT3G05490.1 ralf-like 222.6e-1947.15Show/hide
Query:  SNIHGFLVICTISASYLALSSSTGD----RQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESY
        +N      +  I A  ++   STGD      F+     S     + SIA+    I  E+E +F    +ISRRILA  ++YISY AM RNSVPCSRRG SY
Subjt:  SNIHGFLVICTISASYLALSSSTGD----RQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESY

Query:  YNCRLGAPANPYSQGCSGIARCR
        YNC+ GA ANPYS+GCS I RCR
Subjt:  YNCRLGAPANPYSQGCSGIARCR

AT3G16570.1 rapid alkalinization factor 231.4e-2047.2Show/hide
Query:  IHGFLVICTISASYLALSSSTGDRQFLHLPPVSACR------SGSESIADSDCMI--GGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGE
        I   L+I  +    +A+SS + +      P  + CR      S S ++ D   +   GGE   +F +  EI+RRILA TRRYISY A+ RN++PCSRRG 
Subjt:  IHGFLVICTISASYLALSSSTGDRQFLHLPPVSACR------SGSESIADSDCMI--GGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGE

Query:  SYYNCRLGAPANPYSQGCSGIARCR
        SYYNCR GA ANPYS+GCS I RCR
Subjt:  SYYNCRLGAPANPYSQGCSGIARCR

AT4G15800.1 ralf-like 334.1e-2049.12Show/hide
Query:  LVICTISASYLALSS-STGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPA
        + I T+   + A++S S+GD     +P  S C         ++C +   +E +F +  EI+RRILATT +YISY A+ RN+VPCSRRG SYYNCR GA A
Subjt:  LVICTISASYLALSS-STGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPA

Query:  NPYSQGCSGIARCR
        NPYS+GCS I RCR
Subjt:  NPYSQGCSGIARCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAGCTCGAACATCCATGGCTTCCTCGTGATATGCACAATCTCCGCCTCATATCTGGCGCTCTCTTCGTCCACCGGAGACCGCCAGTTCCTCCACCTTCCGCCGGT
ATCTGCGTGTCGATCGGGATCGGAATCGATCGCCGACTCCGACTGCATGATTGGCGGCGAGGACGAGTTCCAGTTCGCGGTGAAGTTCGAGATAAGCCGCCGGATTCTGG
CGACGACGAGGCGCTACATCAGCTACGACGCGATGTGGAGGAACTCCGTGCCTTGCTCCCGCCGCGGCGAGTCGTATTACAATTGCCGGCTTGGAGCTCCGGCCAATCCC
TACTCTCAAGGCTGCAGCGGCATCGCTCGATGTAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAAGCTCGAACATCCATGGCTTCCTCGTGATATGCACAATCTCCGCCTCATATCTGGCGCTCTCTTCGTCCACCGGAGACCGCCAGTTCCTCCACCTTCCGCCGGT
ATCTGCGTGTCGATCGGGATCGGAATCGATCGCCGACTCCGACTGCATGATTGGCGGCGAGGACGAGTTCCAGTTCGCGGTGAAGTTCGAGATAAGCCGCCGGATTCTGG
CGACGACGAGGCGCTACATCAGCTACGACGCGATGTGGAGGAACTCCGTGCCTTGCTCCCGCCGCGGCGAGTCGTATTACAATTGCCGGCTTGGAGCTCCGGCCAATCCC
TACTCTCAAGGCTGCAGCGGCATCGCTCGATGTAGGTGA
Protein sequenceShow/hide protein sequence
MRSSNIHGFLVICTISASYLALSSSTGDRQFLHLPPVSACRSGSESIADSDCMIGGEDEFQFAVKFEISRRILATTRRYISYDAMWRNSVPCSRRGESYYNCRLGAPANP
YSQGCSGIARCR