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Tan0006007 (gene) of Snake gourd v1 genome

Gene IDTan0006007
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionImportin subunit beta-1
Genome locationLG07:8723040..8723285
RNA-Seq ExpressionTan0006007
SyntenyTan0006007
Gene Ontology termsGO:0006606 - protein import into nucleus (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031267 - small GTPase binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042542.1 importin subunit beta-1 [Cucumis melo var. makuwa]6.4e-3290.36Show/hide
Query:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
        MHMGVLSWGPDCILQVFTLR TGSCSLLVVTNSCI  IMKALLTIALAASSRDLVCHGRSG+RE PLAPPV +AWSV IVSLT
Subjt:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
KGN49854.1 hypothetical protein Csa_000509 [Cucumis sativus]2.9e-3291.57Show/hide
Query:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
        MHMGVLSWGPDCILQVFTLR TGSCSLLVVTNSCI  IMKALLTIALAASSRDLVCHGRSGRRE PLAPPV +AWSV IVSLT
Subjt:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
TrEMBL top hitse value%identityAlignment
A0A0A0KLW1 Uncharacterized protein1.4e-3291.57Show/hide
Query:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
        MHMGVLSWGPDCILQVFTLR TGSCSLLVVTNSCI  IMKALLTIALAASSRDLVCHGRSGRRE PLAPPV +AWSV IVSLT
Subjt:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
A0A5A7TGL2 Importin subunit beta-13.1e-3290.36Show/hide
Query:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
        MHMGVLSWGPDCILQVFTLR TGSCSLLVVTNSCI  IMKALLTIALAASSRDLVCHGRSG+RE PLAPPV +AWSV IVSLT
Subjt:  MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCI--IMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATATGGGTGTGTTGAGTTGGGGTCCAGATTGCATCTTACAAGTCTTCACTCTCAGGGCAACGGGAAGCTGTTCACTTCTAGTTGTCACTAACTCTTGCATCATCAT
GAAAGCATTGCTAACTATTGCATTAGCAGCATCAAGTCGGGATCTTGTATGTCATGGTAGAAGTGGGAGGAGGGAGCATCCATTAGCGCCCCCAGTTTGTATGGCGTGGT
CAGTTCGAATTGTATCTCTGACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCATATGGGTGTGTTGAGTTGGGGTCCAGATTGCATCTTACAAGTCTTCACTCTCAGGGCAACGGGAAGCTGTTCACTTCTAGTTGTCACTAACTCTTGCATCATCAT
GAAAGCATTGCTAACTATTGCATTAGCAGCATCAAGTCGGGATCTTGTATGTCATGGTAGAAGTGGGAGGAGGGAGCATCCATTAGCGCCCCCAGTTTGTATGGCGTGGT
CAGTTCGAATTGTATCTCTGACTTGA
Protein sequenceShow/hide protein sequence
MHMGVLSWGPDCILQVFTLRATGSCSLLVVTNSCIIMKALLTIALAASSRDLVCHGRSGRREHPLAPPVCMAWSVRIVSLT