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Tan0006026 (gene) of Snake gourd v1 genome

Gene IDTan0006026
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionnon-specific lipid-transfer protein 2-like
Genome locationLG04:67597018..67597293
RNA-Seq ExpressionTan0006026
SyntenyTan0006026
Gene Ontology termsGO:0006869 - lipid transport (biological process)
InterPro domainsIPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
IPR033872 - Non-specific lipid-transfer protein type 2
IPR036312 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648143.1 hypothetical protein Csa_023893, partial [Cucumis sativus]9.8e-2155.56Show/hide
Query:  MVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        + V V  A+LA A TCDPNE+R C+WAYT S APSS CC+ V++H+ CYC Y KN  ++SY+QS   KKII+ CG+ +P+C
Subjt:  MVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

KAE8648147.1 hypothetical protein Csa_023900, partial [Cucumis sativus]1.7e-2059.46Show/hide
Query:  ARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        A+LA A TCDPNE+R C+WAYT S APSS CC+ V++H+ CYC Y KN  ++SY+QS   KKIIS CG+ +P+C
Subjt:  ARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

KAF7112276.1 hypothetical protein RHSIM_RhsimUnG0245900 [Rhododendron simsii]2.9e-2058.62Show/hide
Query:  CLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        C LVV  VV++  AR+ EAVTC+P+EL  CL A+T   APS+ CCNK+KE KPC CGY+KN N   YV S  AKK++S CGVP+P C
Subjt:  CLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

KAF7129124.1 hypothetical protein RHSIM_Rhsim10G0070900 [Rhododendron simsii]2.9e-2058.62Show/hide
Query:  CLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        C LVV  VV++  AR+ EAVTC+P+EL  CL A+T   APS+ CCNK+KE KPC CGY+KN N   YV S  AKK++S CGVP+P C
Subjt:  CLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

KAG5247372.1 non-specific lipid-transfer protein [Salix suchowensis]2.4e-1950.56Show/hide
Query:  SFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        SF +++  +V+ +  A+++EAVTC+P EL +CL A T S  PS+ CC+K+KE KPC CGYLKN + K Y+ S  A+K++S CGVP P+C
Subjt:  SFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

TrEMBL top hitse value%identityAlignment
A0A1S3B931 non-specific lipid-transfer protein 2-like2.6e-1953.33Show/hide
Query:  TSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        TS  LLVVA+V ++T AR+AEAVTC+  +L  C+ A T +  PS+ CC+K++E +PC+CGY+KN +   YV+S+ AK IIS CGVP+P C
Subjt:  TSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

A0A438G8G4 Non-specific lipid-transfer protein 25.8e-1954.55Show/hide
Query:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        +  L V MVVI++ A L +AVTC P EL  C  A++ S  PSS CC+K+KE KPC CGYLK+ N+  YV S+ AKKI S CGV  P+C
Subjt:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

A0A438G8N7 Putative non-specific lipid-transfer protein AKCS94.4e-1954.55Show/hide
Query:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        +  L V MVV+++ A L +AVTC P EL +C  A+T S  PSS CC+K+KE KPC CGYLK+ N+  YV SS AK+I S CGV  P C
Subjt:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

A0A438GZ57 Putative non-specific lipid-transfer protein AKCS92.9e-1853.41Show/hide
Query:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        +  L V MVV+++ A L + VTC P EL +C  A+T S  PSS CC+K+KE KPC CGYLK+ N+  YV S+ AKKI S CGV  P C
Subjt:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

A0A5A7VAB3 Non-specific lipid-transfer protein 2-like2.6e-1953.33Show/hide
Query:  TSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        TS  LLVVA+V ++T AR+AEAVTC+  +L  C+ A T +  PS+ CC+K++E +PC+CGY+KN +   YV+S+ AK IIS CGVP+P C
Subjt:  TSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

SwissProt top hitse value%identityAlignment
A2XBN5 Non-specific lipid-transfer protein 21.3e-0731.03Show/hide
Query:  LLVVAMVVIVTRARLAEA-VTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        +L VAMV       +  A  +C+  +L  C  A      P++ CC+ ++  + C+C + K+  Y  YV S  A+K +S CG+ +P C
Subjt:  LLVVAMVVIVTRARLAEA-VTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

P82353 Non-specific lipid-transfer protein 27.1e-1445.59Show/hide
Query:  VTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        VTC P +L  CL          + CC K++E +PC CGYLKN + + YV S  A+K+ S+CGVP+P C
Subjt:  VTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

P82900 Non-specific lipid-transfer protein 2G2.2e-0730.59Show/hide
Query:  LVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        L++A+VV+      A A  C  ++L  C  A      PS  CC  ++  + C+C Y K+  Y  Y++S  A+  ++ CG+ +P C
Subjt:  LVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

P86809 Non-specific lipid-transfer protein 24.1e-1453.12Show/hide
Query:  TCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPI
        TC   +L  CL A T +  PS+ CCNK+KE KPC CGYLK+ N K+YV S  A+K  S CGV +
Subjt:  TCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPI

Q43681 Probable non-specific lipid-transfer protein AKCS98.1e-1846.15Show/hide
Query:  MTSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        M+  C +VV  + ++    +AEAVTC+P EL +C+ A T    PSS CC+K+K  +PC C Y+KN + K YV S  AKK++S+CGV  P C
Subjt:  MTSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

Arabidopsis top hitse value%identityAlignment
AT1G48750.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein4.5e-1639.53Show/hide
Query:  LLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        +L +A  +++    +AE VTC P +L +C  A T S  PS  CC K++E +PC CGY++N   + YV S  A+K+ + C +P P+C
Subjt:  LLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

AT1G73780.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-1338.64Show/hide
Query:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        F   ++ ++++    R+A    C+P +L  CL        PS +CC+KVKE + C C YLKN N+KS++ S  AK I +DC  P P C
Subjt:  FCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

AT2G14846.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.6e-1342.31Show/hide
Query:  IVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        +V R    E V C   +LR CL A      PS  CC K+KE   C CGYLK  ++  YV S  A+K+++ C +PIP C
Subjt:  IVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

AT3G18280.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein1.2e-1642.22Show/hide
Query:  TSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        T   L  +A V+++  A  AEAVTC P +L  C  A T S  PS++CC K+KE +PC CGY++N + + +V +  A+K+   C +PIP C
Subjt:  TSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC

AT5G38170.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein3.3e-1439.58Show/hide
Query:  FCLLVVAMVVIVTRARLAEA--------VTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC
        F + VV ++V     R  E         VTCD  +L +C       V PS+ CC K+KE +PC+C Y+K+  Y  YV S+ AKK ++ CGVP P C
Subjt:  FCLLVVAMVVIVTRARLAEA--------VTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAGCTTTTGCCTTTTAGTGGTGGCAATGGTGGTTATTGTCACTAGAGCTCGACTAGCGGAGGCAGTGACATGTGATCCTAATGAGCTGAGAGCATGTCTTTGGGC
ATACACAATGTCAGTGGCGCCATCATCAGTATGTTGCAACAAGGTGAAGGAGCACAAACCGTGCTATTGTGGATACCTCAAAAATCAAAACTATAAATCCTATGTACAAT
CTTCTGCTGCTAAAAAGATCATTTCTGATTGTGGCGTTCCCATCCCTGCCTGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACAAGCTTTTGCCTTTTAGTGGTGGCAATGGTGGTTATTGTCACTAGAGCTCGACTAGCGGAGGCAGTGACATGTGATCCTAATGAGCTGAGAGCATGTCTTTGGGC
ATACACAATGTCAGTGGCGCCATCATCAGTATGTTGCAACAAGGTGAAGGAGCACAAACCGTGCTATTGTGGATACCTCAAAAATCAAAACTATAAATCCTATGTACAAT
CTTCTGCTGCTAAAAAGATCATTTCTGATTGTGGCGTTCCCATCCCTGCCTGCTAG
Protein sequenceShow/hide protein sequence
MTSFCLLVVAMVVIVTRARLAEAVTCDPNELRACLWAYTMSVAPSSVCCNKVKEHKPCYCGYLKNQNYKSYVQSSAAKKIISDCGVPIPAC