; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006029 (gene) of Snake gourd v1 genome

Gene IDTan0006029
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionDNA polymerase kappa
Genome locationLG01:5849272..5852053
RNA-Seq ExpressionTan0006029
SyntenyTan0006029
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576912.1 hypothetical protein SDJN03_24486, partial [Cucurbita argyrosperma subsp. sororia]1.1e-10385.34Show/hide
Query:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT
        MS+T   LPP M+ T  IP IPQNFSPIHRALTK H  +SSSSK PN QLPLPSKSPKPPK+LI  RGE  PTM+EIL+AGEAQN+S+RLQTLGPFFRIT
Subjt:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT

Query:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS
        AKSLESQREIGKAEGLIRVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGC+TAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGS
Subjt:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS

Query:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTR
        KVGDIGDMLVWGGVGTRMDA IE LL KWC+R
Subjt:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTR

KAG7014938.1 hypothetical protein SDJN02_22569, partial [Cucurbita argyrosperma subsp. argyrosperma]7.1e-10687.01Show/hide
Query:  LPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQ
        LPP M+ T  IP IPQNFSPIHRALTK H  +SSSSK PN QLPLPSKSPKPPK+LI  RGE  PTM+EIL+AGEAQN+S+RLQTLGPFFRITAKSLESQ
Subjt:  LPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQ

Query:  REIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGD
        REIGKAEGLIRVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGSKVGDIGD
Subjt:  REIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGD

Query:  MLVWGGVGTRMDASIEGLLYKWCTRFKSSSS
        MLVWGGVGTRMDA IE LL KWC+RFKS SS
Subjt:  MLVWGGVGTRMDASIEGLLYKWCTRFKSSSS

XP_022922749.1 uncharacterized protein LOC111430648 [Cucurbita moschata]4.1e-10684.87Show/hide
Query:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT
        MS+T   LPP M+ T  IPRIPQNF PIHRALTK H  +SSSSK PN QLPLPSKSPKPPK+LI  RGE  PTM+EI++AGEAQN+S+RLQTLGPFFRIT
Subjt:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT

Query:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS
        AKSLESQREIGKAEGLIRVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGS
Subjt:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS

Query:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS
        K+GDIGDMLVWGGVGTRMDA IE LL KWC+RFKS SS
Subjt:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS

XP_022984679.1 uncharacterized protein LOC111482888 [Cucurbita maxima]9.2e-10684.87Show/hide
Query:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT
        MS+T   LPP M+ T  IPRIPQNFSPIHRALTK H  +SSSSK PN QLPLPSK PKPPK+LI  RGE  PTM+EIL+AGEAQN+S+RLQTLGPFFRIT
Subjt:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT

Query:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS
        AKSLESQREIGKAEGLIRVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGF+++YEVSGS
Subjt:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS

Query:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS
         VGDIGDMLVWGGVGTRMDA IE LL+KWC+RFKS SS
Subjt:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS

XP_023521663.1 uncharacterized protein LOC111785501 [Cucurbita pepo subsp. pepo]4.6e-10584.87Show/hide
Query:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT
        MS+T    PP M+ T  IPRIPQNFSPIHRALTK H  +SSSSK PN QLPLPSKS KPPK+LI  RGE  PTM+EIL+AGEAQN+S+RLQTLGPFFRIT
Subjt:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT

Query:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS
        AKSLESQREIGKAEGLIRVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGC+TAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGS
Subjt:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS

Query:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS
        KVGDIGDMLVWGGVGTRMDA IE LL KWC+RFKS SS
Subjt:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS

TrEMBL top hitse value%identityAlignment
A0A0A0KT41 Uncharacterized protein5.5e-9683.33Show/hide
Query:  TIPRIPQNFSPIHRALTKIHASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQREIGKAEGLIR
        TIPRIP   SPIHR LTKIHASSSSK PNSQLPLPSK  +  ++       NIPTM+EI++AGEAQNLS+RLQTLGPFFRITAKSL ++REIGKAEGL+R
Subjt:  TIPRIPQNFSPIHRALTKIHASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQREIGKAEGLIR

Query:  VWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGDMLVWGGVGTRM
        VWLGG+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK+ DIGDMLVWGG+GTRM
Subjt:  VWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGDMLVWGGVGTRM

Query:  DASIEGLLYKWCTRFK
        DA I+ LL KWCTRFK
Subjt:  DASIEGLLYKWCTRFK

A0A1S3BZR1 uncharacterized protein LOC1034948158.7e-10284.14Show/hide
Query:  TIPRIPQNFSPIHRALTKIHASSSSKCPNSQLPLPSKSPKPPKSLITSRGE---NIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQREIGKAEG
        TIPRIP   SPIHR LTKIHASSSSK PNSQLPLPS      KSLIT+RG+   NIPTM+EI++AGE+QNLS+RLQTLGPFFRITAKSLE++REIGKAEG
Subjt:  TIPRIPQNFSPIHRALTKIHASSSSKCPNSQLPLPSKSPKPPKSLITSRGE---NIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQREIGKAEG

Query:  LIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGDMLVWGGVG
        L+RVWLGG+ILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK+ DIGDM+VWGG+G
Subjt:  LIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGDMLVWGGVG

Query:  TRMDASIEGLLYKWCTRFKSSSSNAQN
        TRMDA IE LL KWCTRFKS SS+ QN
Subjt:  TRMDASIEGLLYKWCTRFKSSSSNAQN

A0A6J1D616 uncharacterized protein LOC1110176378.2e-10087.21Show/hide
Query:  TIPRIPQNFSPIHRALTKIHA--SSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQREIGKAEGL
        TI RIPQNFSPI R L+KIHA  SSSSKCPNSQLP PSKSPKP K    SR +NIPTM EIL+AG AQNL +RLQTLGPFFRITAKS ESQREIGKAEGL
Subjt:  TIPRIPQNFSPIHRALTKIHA--SSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQREIGKAEGL

Query:  IRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGDMLVWGGVGT
        IRVW GGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYG+DCGCKTAELLAINDSDLYHSKLVRFYTRIGFK+MYEVSGSK+GD GDMLVWGGVGT
Subjt:  IRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGDMLVWGGVGT

Query:  RMDASIEGLLYKWCTRFKS
        RMDA IE LL KWCTRFKS
Subjt:  RMDASIEGLLYKWCTRFKS

A0A6J1E4B2 uncharacterized protein LOC1114306482.0e-10684.87Show/hide
Query:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT
        MS+T   LPP M+ T  IPRIPQNF PIHRALTK H  +SSSSK PN QLPLPSKSPKPPK+LI  RGE  PTM+EI++AGEAQN+S+RLQTLGPFFRIT
Subjt:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT

Query:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS
        AKSLESQREIGKAEGLIRVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFK++YEVSGS
Subjt:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS

Query:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS
        K+GDIGDMLVWGGVGTRMDA IE LL KWC+RFKS SS
Subjt:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS

A0A6J1JB84 uncharacterized protein LOC1114828884.5e-10684.87Show/hide
Query:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT
        MS+T   LPP M+ T  IPRIPQNFSPIHRALTK H  +SSSSK PN QLPLPSK PKPPK+LI  RGE  PTM+EIL+AGEAQN+S+RLQTLGPFFRIT
Subjt:  MSVT-LTLPPFMDFT--IPRIPQNFSPIHRALTKIH--ASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRIT

Query:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS
        AKSLESQREIGKAEGLIRVWL GRILHLDSIRL RESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGF+++YEVSGS
Subjt:  AKSLESQREIGKAEGLIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGS

Query:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS
         VGDIGDMLVWGGVGTRMDA IE LL+KWC+RFKS SS
Subjt:  KVGDIGDMLVWGGVGTRMDASIEGLLYKWCTRFKSSSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGTCACACTCACACTCCCGCCATTCATGGACTTCACAATTCCTCGAATCCCCCAAAATTTCTCCCCAATTCACAGAGCCCTAACTAAAATCCACGCCTCATCCTC
ATCCAAATGCCCTAATTCCCAATTACCACTTCCATCAAAATCCCCCAAACCACCGAAATCCCTAATCACTTCAAGGGGCGAGAACATTCCGACGATGTCGGAGATTCTGT
CGGCCGGCGAGGCCCAGAATCTGAGCATCCGGCTGCAAACATTGGGGCCGTTTTTCAGAATAACGGCGAAGAGCTTGGAATCGCAGCGAGAGATCGGGAAGGCGGAAGGA
TTGATAAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATTCGATTGAACAGAGAGAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGG
CGCCGTTGCGATTCGGTATGGGTATGATTGTGGCTGCAAGACGGCGGAGTTATTGGCCATCAATGATTCTGATCTTTACCACTCCAAGCTAGTTAGATTCTACACAAGAA
TTGGGTTCAAGACAATGTACGAAGTGAGTGGTTCAAAGGTAGGAGACATTGGAGACATGTTGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAGCATTGAAGGTCTT
CTATACAAATGGTGTACTCGGTTCAAATCCTCATCATCTAACGCACAAAACTCCCACTCTTTGCCTCGAACTAACTCACAATAG
mRNA sequenceShow/hide mRNA sequence
AAATTGGTCTCCTAATTTGCATTTCCCGTGTCCCTCGATTCCATGTTTACATGTCAGTCACACTCACACTCCCGCCATTCATGGACTTCACAATTCCTCGAATCCCCCAA
AATTTCTCCCCAATTCACAGAGCCCTAACTAAAATCCACGCCTCATCCTCATCCAAATGCCCTAATTCCCAATTACCACTTCCATCAAAATCCCCCAAACCACCGAAATC
CCTAATCACTTCAAGGGGCGAGAACATTCCGACGATGTCGGAGATTCTGTCGGCCGGCGAGGCCCAGAATCTGAGCATCCGGCTGCAAACATTGGGGCCGTTTTTCAGAA
TAACGGCGAAGAGCTTGGAATCGCAGCGAGAGATCGGGAAGGCGGAAGGATTGATAAGAGTGTGGTTGGGAGGGAGGATTCTTCATCTGGATTCGATTCGATTGAACAGA
GAGAGCTTGGGAATGGAGAAATCGATCTTTGGACTCGGATTGTTCATCGGCGCCGTTGCGATTCGGTATGGGTATGATTGTGGCTGCAAGACGGCGGAGTTATTGGCCAT
CAATGATTCTGATCTTTACCACTCCAAGCTAGTTAGATTCTACACAAGAATTGGGTTCAAGACAATGTACGAAGTGAGTGGTTCAAAGGTAGGAGACATTGGAGACATGT
TGGTGTGGGGAGGGGTTGGGACTAGAATGGATGCAAGCATTGAAGGTCTTCTATACAAATGGTGTACTCGGTTCAAATCCTCATCATCTAACGCACAAAACTCCCACTCT
TTGCCTCGAACTAACTCACAATAGGGCTTTTCTTTGAGTTCTATTTTTTTTATTATGAATGTTGAGAAACTTCAACTAACGATGTATAAATTTTGTTTATTCGTAACCAA
GATGTATCATAACCATATACTACATAGCTCGAGTTTACACTAAAAAGATGTGTTTGGTCAATAGATTTTTTTTGAATCTTGTTCAA
Protein sequenceShow/hide protein sequence
MSVTLTLPPFMDFTIPRIPQNFSPIHRALTKIHASSSSKCPNSQLPLPSKSPKPPKSLITSRGENIPTMSEILSAGEAQNLSIRLQTLGPFFRITAKSLESQREIGKAEG
LIRVWLGGRILHLDSIRLNRESLGMEKSIFGLGLFIGAVAIRYGYDCGCKTAELLAINDSDLYHSKLVRFYTRIGFKTMYEVSGSKVGDIGDMLVWGGVGTRMDASIEGL
LYKWCTRFKSSSSNAQNSHSLPRTNSQ