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Tan0006055 (gene) of Snake gourd v1 genome

Gene IDTan0006055
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionS-protein homolog
Genome locationLG03:79407994..79408654
RNA-Seq ExpressionTan0006055
SyntenyTan0006055
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052584.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]1.7e-1477.78Show/hide
Query:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        MDVFWPERHDWLA+RCNY +CIWVAQDDGIY+VN+  + REFV K
Subjt:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

KAE8647731.1 hypothetical protein Csa_003821 [Cucumis sativus]1.2e-1277.78Show/hide
Query:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        MDVFWPERH+WLA RC+Y +CIWVAQDDGIYLVN  K++REFV K
Subjt:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

KAG2712058.1 hypothetical protein I3760_04G107600 [Carya illinoinensis]6.1e-0959.09Show/hide
Query:  DVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        DVFWP + DWL++RCN+++CIW A+DDGIYL NIP++  E + K
Subjt:  DVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

KAG7034676.1 S-protein-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1166.67Show/hide
Query:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        MDVFWPE H WLA+RCN  SC+WVAQDDG+YL NIP+  RE  ++
Subjt:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

XP_042977762.1 S-protein homolog 1-like [Carya illinoinensis]6.1e-0959.09Show/hide
Query:  DVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        DVFWP + DWL++RCN+++CIW A+DDGIYL NIP++  E + K
Subjt:  DVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

TrEMBL top hitse value%identityAlignment
A0A314XMI1 S-protein homolog4.8e-0754.35Show/hide
Query:  MDVFWPER-HDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        +DVFW E  H WL +RCN++ CIW+A+DDGIY+  IP++  EF  K
Subjt:  MDVFWPER-HDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

A0A5A7UB41 S-protein homolog8.1e-1577.78Show/hide
Query:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        MDVFWPERHDWLA+RCNY +CIWVAQDDGIY+VN+  + REFV K
Subjt:  MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

A0A5N5I9W3 S-protein homolog2.1e-0762.5Show/hide
Query:  VFWPER-HDWLAFRCNYESCIWVAQDDGIYLVNIPKSSRE
        VFWPER H WL +RCNY+ C W+A+DDGIYL  IP+S  +
Subjt:  VFWPER-HDWLAFRCNYESCIWVAQDDGIYLVNIPKSSRE

A0A5N6QHU0 S-protein homolog1.3e-0756.52Show/hide
Query:  MDVFWPER-HDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        +DVFW ER + WL++RCN+++CIW+A+DDGIYL  IP++  +FV K
Subjt:  MDVFWPER-HDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

A0A6P4ABD6 S-protein homolog2.1e-0757.78Show/hide
Query:  DVFWPE-RHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK
        DVFWPE RH WL  RC+Y+ CIW A+DDG YL N+P +  E + K
Subjt:  DVFWPE-RHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGTTTTGGCCGGAGAGACACGATTGGCTTGCTTTTAGATGCAACTATGAGTCTTGCATTTGGGTTGCTCAAGATGATGGTATTTATTTGGTGAATATTCCCAA
AAGTTCAAGGGAGTTTGTTACAAAAATTAAAATGGAATTGAATTCCAAATATAAGAACCAAAATGATATTTTAACCCAAATATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGTTTTGGCCGGAGAGACACGATTGGCTTGCTTTTAGATGCAACTATGAGTCTTGCATTTGGGTTGCTCAAGATGATGGTATTTATTTGGTGAATATTCCCAA
AAGTTCAAGGGAGTTTGTTACAAAAATTAAAATGGAATTGAATTCCAAATATAAGAACCAAAATGATATTTTAACCCAAATATTCTAA
Protein sequenceShow/hide protein sequence
MDVFWPERHDWLAFRCNYESCIWVAQDDGIYLVNIPKSSREFVTKIKMELNSKYKNQNDILTQIF