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Tan0006066 (gene) of Snake gourd v1 genome

Gene IDTan0006066
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG08:50655753..50656258
RNA-Seq ExpressionTan0006066
SyntenyTan0006066
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027726.1 Protein EFR3-like B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-0675.68Show/hide
Query:  MIQRWRWLQEQPSLYCGPTDNLAVEKVGFFFFFVFAF
        MIQ+WR LQ QPSL+CGPTDNLAVEKVG  F +VF+F
Subjt:  MIQRWRWLQEQPSLYCGPTDNLAVEKVGFFFFFVFAF
KGN59400.1 hypothetical protein Csa_001971 [Cucumis sativus]5.6e-1654.17Show/hide
Query:  SALNGHQSSRMIQRWRWLQEQPSLYCGPTDNLAVEKVGFFFFFVFA----------FSVIIGSPETDKRETEIFAVKLNAGIPATIFQFVGWIIWL
        S LN H SS +IQRWR LQ+QPS+YCGPTDNLAVEKV  FF +VF+           S         +R+TEIF VKLNAGIP       GW IWL
Subjt:  SALNGHQSSRMIQRWRWLQEQPSLYCGPTDNLAVEKVGFFFFFVFA----------FSVIIGSPETDKRETEIFAVKLNAGIPATIFQFVGWIIWL
TrEMBL top hitse value%identityAlignment
A0A0A0LBJ9 Uncharacterized protein2.7e-1654.17Show/hide
Query:  SALNGHQSSRMIQRWRWLQEQPSLYCGPTDNLAVEKVGFFFFFVFA----------FSVIIGSPETDKRETEIFAVKLNAGIPATIFQFVGWIIWL
        S LN H SS +IQRWR LQ+QPS+YCGPTDNLAVEKV  FF +VF+           S         +R+TEIF VKLNAGIP       GW IWL
Subjt:  SALNGHQSSRMIQRWRWLQEQPSLYCGPTDNLAVEKVGFFFFFVFA----------FSVIIGSPETDKRETEIFAVKLNAGIPATIFQFVGWIIWL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCTCGCTTCTGCTTTAAACGGCCATCAAAGCTCTCGCATGATCCAACGATGGCGATGGCTTCAGGAACAGCCATCCTTGTATTGTGGACCCACAGACAACCT
TGCCGTTGAAAAAGTGGGATTTTTTTTCTTTTTTGTTTTCGCGTTCTCAGTCATAATTGGCAGCCCCGAAACGGATAAGAGAGAAACTGAGATTTTTGCGGTGAAATTAA
ACGCTGGAATTCCGGCTACAATCTTTCAATTTGTAGGCTGGATAATTTGGCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCTCGCTTCTGCTTTAAACGGCCATCAAAGCTCTCGCATGATCCAACGATGGCGATGGCTTCAGGAACAGCCATCCTTGTATTGTGGACCCACAGACAACCT
TGCCGTTGAAAAAGTGGGATTTTTTTTCTTTTTTGTTTTCGCGTTCTCAGTCATAATTGGCAGCCCCGAAACGGATAAGAGAGAAACTGAGATTTTTGCGGTGAAATTAA
ACGCTGGAATTCCGGCTACAATCTTTCAATTTGTAGGCTGGATAATTTGGCTTTGA
Protein sequenceShow/hide protein sequence
MASLASALNGHQSSRMIQRWRWLQEQPSLYCGPTDNLAVEKVGFFFFFVFAFSVIIGSPETDKRETEIFAVKLNAGIPATIFQFVGWIIWL