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Tan0006072 (gene) of Snake gourd v1 genome

Gene IDTan0006072
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:71502901..71503254
RNA-Seq ExpressionTan0006072
SyntenyTan0006072
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038574.1 uncharacterized protein E6C27_scaffold92G001040 [Cucumis melo var. makuwa]2.3e-2262.1Show/hide
Query:  MSMNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRS
        M+MNCLTCQALPRTQSDRE NH     SSRGKSC L V R WSA+L P       +  K   D+       SSS  HKK +  R RS D   NEPRLVRS
Subjt:  MSMNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRS

Query:  SGMRRDWSFEDLRLRD-QKKGRFH
        SGMRRDWSFEDL LRD QKKGRFH
Subjt:  SGMRRDWSFEDLRLRD-QKKGRFH

KGN60385.1 hypothetical protein Csa_002007 [Cucumis sativus]4.8e-2058.68Show/hide
Query:  MSMNCLTCQALPRTQSDRE-INHHGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSAD---NEPRLVRSSG
        M+MNCLTCQALPRTQSDRE   +   S+RGKSC L V R WS +L   ++ SS  S K   D        SSS+ HKKA+  R  ++   NEP+LVRSSG
Subjt:  MSMNCLTCQALPRTQSDRE-INHHGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSAD---NEPRLVRSSG

Query:  MRRDWSFEDLRLRDQKKGRFH
        MRRDWSFEDL LR QKKGRFH
Subjt:  MRRDWSFEDLRLRDQKKGRFH

XP_008465978.2 PREDICTED: uncharacterized protein LOC103503546 [Cucumis melo]1.1e-2162.3Show/hide
Query:  MNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRSSG
        MNCLTCQALPRTQSDRE NH     SSRGKSC L V R WSA+L P       +  K   D+       SSS  HKK +  R RS D   NEPRLVRSSG
Subjt:  MNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRSSG

Query:  MRRDWSFEDLRLRD-QKKGRFH
        MRRDWSFEDL LRD QKKGRFH
Subjt:  MRRDWSFEDLRLRD-QKKGRFH

XP_022159728.1 uncharacterized protein LOC111026067 [Momordica charantia]1.9e-2459.54Show/hide
Query:  MSMNCLTCQALPRTQSDREINHH--------GSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKI------TRRSAD
        MSMNCLTCQALPRTQSDRE N++         S  RGKSC L V R WSA+L PT    S    KT  D    G SS  S S KK K       +    +
Subjt:  MSMNCLTCQALPRTQSDREINHH--------GSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKI------TRRSAD

Query:  NEPRLVRSSGMRRDWSFEDLRLRDQKKGRFH
        NEPRLVRSSGMRRDWSFEDLRLRDQKKGRFH
Subjt:  NEPRLVRSSGMRRDWSFEDLRLRDQKKGRFH

XP_038887010.1 uncharacterized protein LOC120077178 [Benincasa hispida]1.6e-2364.23Show/hide
Query:  MSMNCLTCQALPRTQSDREINHHG---SSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSAD---NEPRLVRS
        MSMNCLTCQALPRTQSDRE  +HG   SSSRGKSC L V R WSA+L P     S  S K   D+        SSS  KKAK  R  +D   NEPRLVRS
Subjt:  MSMNCLTCQALPRTQSDREINHHG---SSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSAD---NEPRLVRS

Query:  SGMRRDWSFEDLRLRDQKKGRFH
        SGMRRDWSFEDL LRDQKK RFH
Subjt:  SGMRRDWSFEDLRLRDQKKGRFH

TrEMBL top hitse value%identityAlignment
A0A0A0LEC0 Uncharacterized protein2.3e-2058.68Show/hide
Query:  MSMNCLTCQALPRTQSDRE-INHHGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSAD---NEPRLVRSSG
        M+MNCLTCQALPRTQSDRE   +   S+RGKSC L V R WS +L   ++ SS  S K   D        SSS+ HKKA+  R  ++   NEP+LVRSSG
Subjt:  MSMNCLTCQALPRTQSDRE-INHHGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSAD---NEPRLVRSSG

Query:  MRRDWSFEDLRLRDQKKGRFH
        MRRDWSFEDL LR QKKGRFH
Subjt:  MRRDWSFEDLRLRDQKKGRFH

A0A1S3CRL3 uncharacterized protein LOC1035035465.5e-2262.3Show/hide
Query:  MNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRSSG
        MNCLTCQALPRTQSDRE NH     SSRGKSC L V R WSA+L P       +  K   D+       SSS  HKK +  R RS D   NEPRLVRSSG
Subjt:  MNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRSSG

Query:  MRRDWSFEDLRLRD-QKKGRFH
        MRRDWSFEDL LRD QKKGRFH
Subjt:  MRRDWSFEDLRLRD-QKKGRFH

A0A5A7T546 Uncharacterized protein1.1e-2262.1Show/hide
Query:  MSMNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRS
        M+MNCLTCQALPRTQSDRE NH     SSRGKSC L V R WSA+L P       +  K   D+       SSS  HKK +  R RS D   NEPRLVRS
Subjt:  MSMNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRS

Query:  SGMRRDWSFEDLRLRD-QKKGRFH
        SGMRRDWSFEDL LRD QKKGRFH
Subjt:  SGMRRDWSFEDLRLRD-QKKGRFH

A0A5D3E5T4 Uncharacterized protein5.5e-2262.3Show/hide
Query:  MNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRSSG
        MNCLTCQALPRTQSDRE NH     SSRGKSC L V R WSA+L P       +  K   D+       SSS  HKK +  R RS D   NEPRLVRSSG
Subjt:  MNCLTCQALPRTQSDREINH--HGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITR-RSAD---NEPRLVRSSG

Query:  MRRDWSFEDLRLRD-QKKGRFH
        MRRDWSFEDL LRD QKKGRFH
Subjt:  MRRDWSFEDLRLRD-QKKGRFH

A0A6J1DZN2 uncharacterized protein LOC1110260679.1e-2559.54Show/hide
Query:  MSMNCLTCQALPRTQSDREINHH--------GSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKI------TRRSAD
        MSMNCLTCQALPRTQSDRE N++         S  RGKSC L V R WSA+L PT    S    KT  D    G SS  S S KK K       +    +
Subjt:  MSMNCLTCQALPRTQSDREINHH--------GSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKI------TRRSAD

Query:  NEPRLVRSSGMRRDWSFEDLRLRDQKKGRFH
        NEPRLVRSSGMRRDWSFEDLRLRDQKKGRFH
Subjt:  NEPRLVRSSGMRRDWSFEDLRLRDQKKGRFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35215.1 unknown protein7.9e-0532.71Show/hide
Query:  MSMNCLTCQALPRTQSDREINHHGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSADNEPRLVRSSGMRRD
        MS+NCL C  L RT SDR++     SS  ++                ++S+     + R+ +      +        A I      +EP+LVRSSG+RRD
Subjt:  MSMNCLTCQALPRTQSDREINHHGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSADNEPRLVRSSGMRRD

Query:  WSFEDLR
        WSFEDL+
Subjt:  WSFEDLR

AT5G46770.1 unknown protein3.8e-0733.86Show/hide
Query:  MSMNCLTCQALPRTQSDREINHHG--------SSSRGKSCWLDV--KRPWSADLIP----------TSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKI
        MS+NCL+CQALPRT S+++++  G        ++  GK+C ++    R WS +L P          +S +      K    V  +G   SS S+      
Subjt:  MSMNCLTCQALPRTQSDREINHHG--------SSSRGKSCWLDV--KRPWSADLIP----------TSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKI

Query:  TRRSADNEPRLVRSSGMRRDWSFEDLR
           +   +P+LVRS+G+RR+WSFE+LR
Subjt:  TRRSADNEPRLVRSSGMRRDWSFEDLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCATGAATTGCCTAACATGCCAAGCTCTTCCAAGGACACAATCAGATAGGGAGATCAATCATCATGGTTCCTCTAGCAGAGGCAAATCATGTTGGCTAGATGTCAA
ACGTCCCTGGTCGGCCGACCTCATTCCCACATCGTCGTCATCGTCATCGTCGTCGTTCAAAACAAGAACCGATGTTGACGCTGCAGGCGGCTCTTCTTCTTCTTCTTCTT
CGCACAAGAAGGCAAAGATCACCCGCCGCAGCGCCGATAACGAGCCGAGGTTGGTGAGGAGCTCTGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGAGATTGAGAGAT
CAGAAGAAAGGGAGATTCCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCATGAATTGCCTAACATGCCAAGCTCTTCCAAGGACACAATCAGATAGGGAGATCAATCATCATGGTTCCTCTAGCAGAGGCAAATCATGTTGGCTAGATGTCAA
ACGTCCCTGGTCGGCCGACCTCATTCCCACATCGTCGTCATCGTCATCGTCGTCGTTCAAAACAAGAACCGATGTTGACGCTGCAGGCGGCTCTTCTTCTTCTTCTTCTT
CGCACAAGAAGGCAAAGATCACCCGCCGCAGCGCCGATAACGAGCCGAGGTTGGTGAGGAGCTCTGGGATGAGAAGGGATTGGAGCTTTGAGGATTTGAGATTGAGAGAT
CAGAAGAAAGGGAGATTCCATTGA
Protein sequenceShow/hide protein sequence
MSMNCLTCQALPRTQSDREINHHGSSSRGKSCWLDVKRPWSADLIPTSSSSSSSSFKTRTDVDAAGGSSSSSSSHKKAKITRRSADNEPRLVRSSGMRRDWSFEDLRLRD
QKKGRFH