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Tan0006155 (gene) of Snake gourd v1 genome

Gene IDTan0006155
OrganismTrichosanthes anguina (Snake gourd v1)
Description60S ribosomal protein L39
Genome locationLG01:100953576..100956274
RNA-Seq ExpressionTan0006155
SyntenyTan0006155
Gene Ontology termsGO:0006520 - cellular amino acid metabolic process (biological process)
GO:0009058 - biosynthetic process (biological process)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004069 - L-aspartate:2-oxoglutarate aminotransferase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5726265.1 aspartate aminotransferase chloroplastic [Tripterygium wilfordii]2.4e-0884.44Show/hide
Query:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALAS
        AVSQD Q++EEAREEDEAEQANP+LDP ENRQ+ QIQREAQALAS
Subjt:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALAS

KAG6528313.1 hypothetical protein ZIOFF_010466 [Zingiber officinale]1.4e-0848.91Show/hide
Query:  LSPPKPNDIHRSPLFDWKVYKFVIRFSPLFQSAAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKV
        +S P P  + RS  F+W    F + F  L    A++QD  ++EEA EEDEAEQAN +LDP  + Q++Q+QREAQALAS+Q RVLS  + L++
Subjt:  LSPPKPNDIHRSPLFDWKVYKFVIRFSPLFQSAAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKV

KAG7031772.1 hypothetical protein SDJN02_05813, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-1394Show/hide
Query:  VSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVL
        VSQDFQN+EEAREEDEAEQA PALDPSENRQYYQIQR+AQALASHQARVL
Subjt:  VSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVL

PKA65509.1 hypothetical protein AXF42_Ash005843 [Apostasia shenzhenica]2.8e-0964.06Show/hide
Query:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKVHNYQH
        AV+QDFQ+KEEA EEDEAEQA+P LDP E+ ++ QIQR+AQALA H+ARVL S+ S   H   H
Subjt:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKVHNYQH

VVA11576.1 unknown partial [Prunus dulcis]6.3e-0965.52Show/hide
Query:  SPLFQSAAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVL
        SP    +AV QD  N+EEA EEDEAEQA+P+LDP E+RQ++Q+QR+AQALA HQAR L
Subjt:  SPLFQSAAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVL

TrEMBL top hitse value%identityAlignment
A0A2I0BCI7 Uncharacterized protein1.4e-0964.06Show/hide
Query:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKVHNYQH
        AV+QDFQ+KEEA EEDEAEQA+P LDP E+ ++ QIQR+AQALA H+ARVL S+ S   H   H
Subjt:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKVHNYQH

A0A445K5S6 60S ribosomal protein L391.3e-0758.73Show/hide
Query:  VSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKVHNYQH
        V+QD QN+EE  EEDEAEQA+P LDP E+RQ++Q+QREA +LASHQA +LS     K     H
Subjt:  VSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKVHNYQH

A0A5E4E8H2 Uncharacterized protein3.1e-0965.52Show/hide
Query:  SPLFQSAAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVL
        SP    +AV QD  N+EEA EEDEAEQA+P+LDP E+RQ++Q+QR+AQALA HQAR L
Subjt:  SPLFQSAAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVL

A0A6N2M5H5 Uncharacterized protein1.2e-0871.7Show/hide
Query:  AAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLS
        AAV+QD Q++EEA EEDEAEQA+P+LDP E+RQ++Q+Q EAQALA +QARVLS
Subjt:  AAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLS

A0A7J7BX51 Aspartate aminotransferase1.2e-0884.44Show/hide
Query:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALAS
        AVSQD Q++EEAREEDEAEQANP+LDP ENRQ+ QIQREAQALAS
Subjt:  AVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTACGTTTTGCTATTCAACTCTGTGAACTTCTTTCTCCCCCTAAACCTAATGATATTCATCGTTCCCCATTGTTTGATTGGAAAGTGTACAAGTTTGTGATTCGGTT
TTCTCCTCTCTTCCAATCCGCAGCCGTCTCACAAGACTTTCAGAATAAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCAATCCCGCACTGGATCCGTCTGAGA
ACCGACAATACTATCAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGAGTTCGACAATGTCTTTGAAAGTTCACAATTATCAGCATTCTCTC
GAATACTCCTCTTTGAATTCTCCCATTGTTCCACCTCTTGGTTTTGAAATTCCATACCCTAATCTCAATTGGATCGACCAGCCTCGACGTGATTGTTGGAAGAAAGTCGA
GCTTTCCAAATCTCTGAATACTTGCAATTTAATGGGCAAGGTTAAGATTCTAAAACGTGGTGAAGAGCTCTCCAATACAATGAGGGACCGATTATTCCCTGTGATTCTTA
ACAAAGAAAATCAAGAAGAAGAAGAAGATTCAGACTCCGATGATTCAAATGACCCCTTGCTCTCGAGTTTTGAATCAGCTGATAGTATGAAATTTGAACTCATTCACTCC
AAGTTCATCGAATCATTCTATTTTGGCTCCTCGATATTCATTGCCTCGCCACCCCCTAGTGCTCTCCCTATACCTACTTTCTTGAAAAAAACTGAGCGAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTACGTTTTGCTATTCAACTCTGTGAACTTCTTTCTCCCCCTAAACCTAATGATATTCATCGTTCCCCATTGTTTGATTGGAAAGTGTACAAGTTTGTGATTCGGTT
TTCTCCTCTCTTCCAATCCGCAGCCGTCTCACAAGACTTTCAGAATAAAGAAGAAGCTCGCGAAGAAGATGAGGCAGAACAGGCCAATCCCGCACTGGATCCGTCTGAGA
ACCGACAATACTATCAGATACAACGCGAAGCGCAGGCACTGGCGTCGCACCAAGCTAGGGTTCTGAGTTCGACAATGTCTTTGAAAGTTCACAATTATCAGCATTCTCTC
GAATACTCCTCTTTGAATTCTCCCATTGTTCCACCTCTTGGTTTTGAAATTCCATACCCTAATCTCAATTGGATCGACCAGCCTCGACGTGATTGTTGGAAGAAAGTCGA
GCTTTCCAAATCTCTGAATACTTGCAATTTAATGGGCAAGGTTAAGATTCTAAAACGTGGTGAAGAGCTCTCCAATACAATGAGGGACCGATTATTCCCTGTGATTCTTA
ACAAAGAAAATCAAGAAGAAGAAGAAGATTCAGACTCCGATGATTCAAATGACCCCTTGCTCTCGAGTTTTGAATCAGCTGATAGTATGAAATTTGAACTCATTCACTCC
AAGTTCATCGAATCATTCTATTTTGGCTCCTCGATATTCATTGCCTCGCCACCCCCTAGTGCTCTCCCTATACCTACTTTCTTGAAAAAAACTGAGCGAAATTAG
Protein sequenceShow/hide protein sequence
MVRFAIQLCELLSPPKPNDIHRSPLFDWKVYKFVIRFSPLFQSAAVSQDFQNKEEAREEDEAEQANPALDPSENRQYYQIQREAQALASHQARVLSSTMSLKVHNYQHSL
EYSSLNSPIVPPLGFEIPYPNLNWIDQPRRDCWKKVELSKSLNTCNLMGKVKILKRGEELSNTMRDRLFPVILNKENQEEEEDSDSDDSNDPLLSSFESADSMKFELIHS
KFIESFYFGSSIFIASPPPSALPIPTFLKKTERN