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Tan0006170 (gene) of Snake gourd v1 genome

Gene IDTan0006170
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPhytocyanin domain-containing protein
Genome locationLG04:34024270..34044333
RNA-Seq ExpressionTan0006170
SyntenyTan0006170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049895.1 uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa]6.4e-0676.32Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVV
        MNED IFVQVFGP+KHG V GYGVGV P ELF SS  V
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVV

KAG7990634.1 hypothetical protein I3843_02G035100 [Carya illinoinensis]2.2e-0638.64Show/hide
Query:  MPKGRAADLHPFDPEIERTCRRLLREGRTEPQEMVDQELINNPKPIREYFQPVFNSEQAGKVHAPINANNLELKTVVIQMVREGALRG
        M + R+ D+ P DPEIERT R  LR  +       D+E++  P+ +++Y +PV N   +  +  PINANN ELK  +I MV++    G
Subjt:  MPKGRAADLHPFDPEIERTCRRLLREGRTEPQEMVDQELINNPKPIREYFQPVFNSEQAGKVHAPINANNLELKTVVIQMVREGALRG

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]3.6e-0947.73Show/hide
Query:  MPKGRAADLHPFDPEIERTCRRLLREGRTEPQEMVDQELINNPKPIREYFQPVFNSEQAGKVHAPINANNLELKTVVIQMVREGALRG
        MP+    +L P DPEI+RT RR LR    +  EM ++     PK IR+YFQP   + Q G ++ PIN NN ELK  +IQM RE A RG
Subjt:  MPKGRAADLHPFDPEIERTCRRLLREGRTEPQEMVDQELINNPKPIREYFQPVFNSEQAGKVHAPINANNLELKTVVIQMVREGALRG

XP_008457059.1 PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]2.2e-0657.41Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK
        MN+D IFVQ+FGP+KH  V GYGVGVI SELFGSS  V    +++ + LN+ +K
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK

XP_038904040.1 uncharacterized protein LOC120090445 [Benincasa hispida]5.2e-0859.26Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK
        MNED+ FV+VFGP+KHG VHGYGVGV PSELFGSS  +   +    + LN+ E+
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK

TrEMBL top hitse value%identityAlignment
A0A1S3C480 uncharacterized protein LOC1034968281.1e-0657.41Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK
        MN+D IFVQ+FGP+KH  V GYGVGVI SELFGSS  V    +++ + LN+ +K
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK

A0A2N9GAI3 Uncharacterized protein5.3e-0650Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK
        M ED++FV+VFGP+ HGRV GYG GV P+EL+GSS   ++      K   +K K
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK

A0A2N9IEM4 Uncharacterized protein4.0e-0650Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK
        M ED++FV+VFGP+ HGRV GYG GV P+EL+GSS   ++      K   +K K
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK

A0A5A7U8E9 Uncharacterized protein3.1e-0676.32Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVV
        MNED IFVQVFGP+KHG V GYGVGV P ELF SS  V
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVV

A0A5D3BP34 Bromodomain-containing factor 1-like isoform X29.0e-0655.56Show/hide
Query:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK
        MN+D IFVQ+ GP+KH  V GYGVGVI SELFGSS  V    +++ + LN+ +K
Subjt:  MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAGGACAAGATTTTTGTTCAAGTTTTTGGACCAAAGAAGCATGGACGTGTTCATGGTTATGGGGTAGGTGTTATACCTTCTGAGTTGTTTGGATCATCTCAAGT
CGTCTTAATGAGCCAGAACAACGTCTTCAAGAATTTGAACGACAAAGAAAAGTCGAGGTGTATGCCCAAAGGGAGAGCTGCAGACTTGCACCCTTTTGATCCTGAGATCG
AGAGGACCTGTAGAAGACTCCTAAGGGAAGGAAGAACAGAACCTCAAGAAATGGTTGATCAGGAGCTCATCAATAACCCTAAACCTATAAGGGAGTATTTCCAACCTGTG
TTTAATTCTGAGCAGGCTGGAAAAGTCCATGCCCCCATCAATGCTAATAACCTTGAACTGAAAACAGTAGTGATACAAATGGTTAGGGAAGGTGCTTTGAGAGGCTAG
mRNA sequenceShow/hide mRNA sequence
CAGGTCGTCACAAAATAAATGGCGATTTTGAGGTTAATCACTGGTCGTCACCAGACGCCGAAGATGGTGAAGGGAAGGCAAGGAGAGAGAGTTAGACTCTACGTAAGGGA
AACAATTCTCGGCTACAAGAGAGACAACAAGAGTTCATAAGTGGTTCATCTTGGACAACATGAGGTGTTTCAGCTAACGTTCAAGCGTGCTACTTTTCCCAGCTTCAAGC
CACTTTTGTTGAGATTACGACGTAGATGTTTGTTACTGCTGATGGTTTGATAGACAATTTTGGTGACTGGATTGGATTCTACGATGTTTCAATTGTTGAGCTTTCAGAGC
ATTGTTCCTGTTAAATTGAGAAATGGGATTTGTGTTAAATTGAGAATGTTTCAATAAACTTTATCTTCAACTGTTGCAGAAAAAGGAGTTTCAGCATCAACTAAAGGCTC
AACATCGGAACTCAAATCATATGCTCCTCAAGTGGTTGATGGTACACTTGACATGAACGAGGACAAGATTTTTGTTCAAGTTTTTGGACCAAAGAAGCATGGACGTGTTC
ATGGTTATGGGGTAGGTGTTATACCTTCTGAGTTGTTTGGATCATCTCAAGTCGTCTTAATGAGCCAGAACAACGTCTTCAAGAATTTGAACGACAAAGAAAAGTCGAGG
TGTATGCCCAAAGGGAGAGCTGCAGACTTGCACCCTTTTGATCCTGAGATCGAGAGGACCTGTAGAAGACTCCTAAGGGAAGGAAGAACAGAACCTCAAGAAATGGTTGA
TCAGGAGCTCATCAATAACCCTAAACCTATAAGGGAGTATTTCCAACCTGTGTTTAATTCTGAGCAGGCTGGAAAAGTCCATGCCCCCATCAATGCTAATAACCTTGAAC
TGAAAACAGTAGTGATACAAATGGTTAGGGAAGGTGCTTTGAGAGGCTAGCAGCCACGAAAGATCCTAACTCTCATCTTCAAAATTTTTGGAAATC
Protein sequenceShow/hide protein sequence
MNEDKIFVQVFGPKKHGRVHGYGVGVIPSELFGSSQVVLMSQNNVFKNLNDKEKSRCMPKGRAADLHPFDPEIERTCRRLLREGRTEPQEMVDQELINNPKPIREYFQPV
FNSEQAGKVHAPINANNLELKTVVIQMVREGALRG