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Tan0006179 (gene) of Snake gourd v1 genome

Gene IDTan0006179
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionprotein PAT1 homolog 1
Genome locationLG08:67932404..67933642
RNA-Seq ExpressionTan0006179
SyntenyTan0006179
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037483.1 Protein PAT1-like 1 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1263.51Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTS+DLTRF ANST         YAFF +        GLEDEEDD +A GIDEEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE

XP_008444289.1 PREDICTED: protein PAT1 homolog 1 [Cucumis melo]1.4e-1161.33Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTSEDL RF ANST         YAFF +         GLEDEEDD +A GI+EEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE

XP_022940287.1 uncharacterized protein LOC111445957 isoform X1 [Cucurbita moschata]2.8e-1263.51Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTS+DLTRF ANST         YAFF +        GLEDEEDD +A GIDEEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE

XP_022981086.1 uncharacterized protein LOC111480345 isoform X1 [Cucurbita maxima]2.8e-1263.51Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTS+DLTRF ANST         YAFF +        GLEDEEDD +A GIDEEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE

XP_023523774.1 uncharacterized protein LOC111787912 isoform X1 [Cucurbita pepo subsp. pepo]2.8e-1263.51Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTS+DLTRF ANST         YAFF +        GLEDEEDD +A GIDEEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE

TrEMBL top hitse value%identityAlignment
A0A1S3BAS9 protein PAT1 homolog 16.7e-1261.33Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTSEDL RF ANST         YAFF +         GLEDEEDD +A GI+EEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE

A0A5A7UFS4 Protein PAT1-like protein 16.7e-1261.33Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTSEDL RF ANST         YAFF +         GLEDEEDD +A GI+EEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE

A0A5D3BUX1 Protein PAT1-like protein 16.7e-1261.33Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTSEDL RF ANST         YAFF +         GLEDEEDD +A GI+EEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ---------GLEDEEDDAVAVGIDEEEFLFDKE

A0A6J1FJ64 uncharacterized protein LOC111445957 isoform X11.4e-1263.51Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTS+DLTRF ANST         YAFF +        GLEDEEDD +A GIDEEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE

A0A6J1IVH7 uncharacterized protein LOC111480345 isoform X11.4e-1263.51Show/hide
Query:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE
        MDGFGNG  V+VASTS+DLTRF ANST         YAFF +        GLEDEEDD +A GIDEEEFLFDKE
Subjt:  MDGFGNGPGVEVASTSEDLTRFRANST-------GTYAFFWQ--------GLEDEEDDAVAVGIDEEEFLFDKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGTTTCGGTAACGGACCTGGAGTTGAAGTTGCGTCTACATCCGAGGATCTCACGCGTTTTCGAGCCAATTCCACGGGTACGTATGCATTTTTTTGGCAAGGATT
AGAAGATGAAGAGGATGATGCAGTTGCTGTTGGAATTGATGAGGAGGAGTTTTTGTTTGATAAGGAGATCGTTTCTATGCCTATGCCTGAGTCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGGTTTCGGTAACGGACCTGGAGTTGAAGTTGCGTCTACATCCGAGGATCTCACGCGTTTTCGAGCCAATTCCACGGGTACGTATGCATTTTTTTGGCAAGGATT
AGAAGATGAAGAGGATGATGCAGTTGCTGTTGGAATTGATGAGGAGGAGTTTTTGTTTGATAAGGAGATCGTTTCTATGCCTATGCCTGAGTCGTGA
Protein sequenceShow/hide protein sequence
MDGFGNGPGVEVASTSEDLTRFRANSTGTYAFFWQGLEDEEDDAVAVGIDEEEFLFDKEIVSMPMPES