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Tan0006229 (gene) of Snake gourd v1 genome

Gene IDTan0006229
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
Genome locationLG01:3871917..3874901
RNA-Seq ExpressionTan0006229
SyntenyTan0006229
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034013.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.2e-2066.22Show/hide
Query:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

KAA0040476.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]5.4e-2066.22Show/hide
Query:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

KAA0054449.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]5.4e-2061.73Show/hide
Query:  QLGHNRRVMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        Q+  +  +M +N GP+DP VLY +  HRS+ VW+D+N  E++CRRRETVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  QLGHNRRVMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.2e-2066.22Show/hide
Query:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

XP_008465830.1 PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]1.6e-1967.12Show/hide
Query:  MNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  MNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

TrEMBL top hitse value%identityAlignment
A0A1S3CPS3 serine/threonine-protein phosphatase 7 long form homolog7.6e-2067.12Show/hide
Query:  MNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  MNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5A7SU33 Serine/threonine-protein phosphatase 7 long form-like protein4.5e-2066.22Show/hide
Query:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5A7ULW8 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.6e-2061.73Show/hide
Query:  QLGHNRRVMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        Q+  +  +M +N GP+DP VLY +  HRS+ VW+D+N  E++CRRRETVV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  QLGHNRRVMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein4.5e-2066.22Show/hide
Query:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

A0A5D3DIM2 Serine/threonine-protein phosphatase 7 long form-like protein2.6e-2066.22Show/hide
Query:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +M +N GP+DP VLY Q  HRS+ VW+D+N  E++CRRRE VV RTIPLHR+ILP LRA G  G+ARLGFIQLD
Subjt:  VMNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

SwissProt top hitse value%identityAlignment
Q9LNG5 Serine/threonine-protein phosphatase 7 long form homolog1.3e-0539.73Show/hide
Query:  NINPGPLDPSVLYAQETHRSQLVWNDQ-NVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +++PGP+D S+L  Q  HRS  +W D+    EL CR +  +  R  PL   +   L   GL GV ++ FIQLD
Subjt:  NINPGPLDPSVLYAQETHRSQLVWNDQ-NVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

Arabidopsis top hitse value%identityAlignment
AT1G48120.1 hydrolases;protein serine/threonine phosphatases9.6e-0739.73Show/hide
Query:  NINPGPLDPSVLYAQETHRSQLVWNDQ-NVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD
        +++PGP+D S+L  Q  HRS  +W D+    EL CR +  +  R  PL   +   L   GL GV ++ FIQLD
Subjt:  NINPGPLDPSVLYAQETHRSQLVWNDQ-NVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD

AT2G25010.1 Aminotransferase-like, plant mobile domain family protein9.9e-0442.86Show/hide
Query:  MNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVV
        M+I+ GP+DPSVLY Q+ H S  VW  Q    L C+   +++
Subjt:  MNINPGPLDPSVLYAQETHRSQLVWNDQNVEELHCRRRETVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGACAAATGTTTAGGATTTGTTTTACACCAAAATCAGTCTACGAATGACGGTATTGATTATGACCAAGAAGCATGTGGAGGTTTTACGATTAATGTGAACAGTGG
GGTCATATTTGAACAATTTGTTGAGATGGTAAGATTATCACTTGGTGTGGATGTCATCCAATGTATAGATCATGAGCCTGAATCAGTTGCCCTACCTTGTGACGTCGAGG
ACATGGTTATGGATTGGAGAGAGCCAAGTACTCAACAACGATGTGGGTTGTGCAATCAATTGGGTCATAATCGAAGGGTCATGAATATCAATCCAGGTCCACTTGATCCA
TCAGTTTTGTATGCACAAGAAACACATCGATCACAACTTGTTTGGAACGATCAGAACGTAGAAGAGTTACATTGTCGACGTAGGGAAACAGTTGTATCTCGAACCATCCC
ACTACATCGACACATACTCCCTCATTTACGTGCAATAGGGTTGGAAGGGGTGGCCAGATTGGGTTTCATTCAGTTGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGACAAATGTTTAGGATTTGTTTTACACCAAAATCAGTCTACGAATGACGGTATTGATTATGACCAAGAAGCATGTGGAGGTTTTACGATTAATGTGAACAGTGG
GGTCATATTTGAACAATTTGTTGAGATGGTAAGATTATCACTTGGTGTGGATGTCATCCAATGTATAGATCATGAGCCTGAATCAGTTGCCCTACCTTGTGACGTCGAGG
ACATGGTTATGGATTGGAGAGAGCCAAGTACTCAACAACGATGTGGGTTGTGCAATCAATTGGGTCATAATCGAAGGGTCATGAATATCAATCCAGGTCCACTTGATCCA
TCAGTTTTGTATGCACAAGAAACACATCGATCACAACTTGTTTGGAACGATCAGAACGTAGAAGAGTTACATTGTCGACGTAGGGAAACAGTTGTATCTCGAACCATCCC
ACTACATCGACACATACTCCCTCATTTACGTGCAATAGGGTTGGAAGGGGTGGCCAGATTGGGTTTCATTCAGTTGGACTGA
Protein sequenceShow/hide protein sequence
MGDKCLGFVLHQNQSTNDGIDYDQEACGGFTINVNSGVIFEQFVEMVRLSLGVDVIQCIDHEPESVALPCDVEDMVMDWREPSTQQRCGLCNQLGHNRRVMNINPGPLDP
SVLYAQETHRSQLVWNDQNVEELHCRRRETVVSRTIPLHRHILPHLRAIGLEGVARLGFIQLD