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Tan0006253 (gene) of Snake gourd v1 genome

Gene IDTan0006253
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionPhospho-N-acetylmuramoyl-pentapeptide-transferase
Genome locationLG01:15586056..15586938
RNA-Seq ExpressionTan0006253
SyntenyTan0006253
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060595.1 hypothetical protein E6C27_scaffold22G004710 [Cucumis melo var. makuwa]8.4e-5071.93Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRF-NAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAALSRNSSVSSTASGFH
        M DGYSKIKAA KFKSRSIDYSDLSSLPH+L F NAAVS+     SN +R  R  EPP  RLPEE+EE      D  RG   AA LSRNSSVSS+ SGF 
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRF-NAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAALSRNSSVSSTASGFH

Query:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACK
        SAVKRALSMRRSSSVAERYCRIHDQF T ASPI+DDE+EGGDSKE GK GGS   KKKK NAAGKIV+A +
Subjt:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACK

KAG7015455.1 hypothetical protein SDJN02_23091, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-5273.18Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNP--RDSNQNRM----YRLPEPPQGRLPEEEEEDVYRG--AATAAALSRNSSVSSTASGF
        M D YSKIKAA KFKSRSIDYSDL+SLPH+ RFNAA + SNP   DSN+N+      RLPE  +    EEEEED Y G  +A AAALSRN+SVSS+ SGF
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNP--RDSNQNRM----YRLPEPPQGRLPEEEEEDVYRG--AATAAALSRNSSVSSTASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVR--IKKKKKNAAGKIVKACKRLFGL
        HSAVKRALSMRRSSSVAERYCRIHDQF TLASPIDDDE+E GDSKE  KTGGSV+   KKKKKN+AGKIV+ACKRLFG+
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVR--IKKKKKNAAGKIVKACKRLFGL

KAG7031359.1 hypothetical protein SDJN02_05399, partial [Cucurbita argyrosperma subsp. argyrosperma]9.6e-5476.61Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEEDVYRGAATAAA--LSRNSSVSSTASGFHSAVKR
        M D YSKI+AA K KSRS+DYSDLSSLPH+LRF AA S+ N RDS+QNR  R  EPP G LP EEEED YR AATA A  L RN SVS++ASGFHSAVKR
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEEDVYRGAATAAA--LSRNSSVSSTASGFHSAVKR

Query:  ALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACKRLFGL
        ALSMRRSSSVAERY RIHDQF TLASPIDDDEIEG +SKEG   GGSVR  KKK NAAGKIV+ACKRLFGL
Subjt:  ALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACKRLFGL

KGN56255.1 hypothetical protein Csa_011668 [Cucumis sativus]1.8e-5273.45Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAA-LSRNSSVSSTASGFH
        M DGYSKIKAA KFKSRSIDYSDLSSLPH+L F+AAV       SN  R  R  EPP GRLPEE+EE      D  RGA TAAA L RNSSVSS+ SGF 
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAA-LSRNSSVSSTASGFH

Query:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGS-VRIKKKKKNAAGKIVKACKRLFGL
        SAVKRALSMRRSSSVAERYCRIHDQF T ASPI+DDE+EGGD KE GK GGS +R KKKKKNAA KIV+ACKR+FGL
Subjt:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGS-VRIKKKKKNAAGKIVKACKRLFGL

XP_022929198.1 uncharacterized protein LOC111435863 [Cucurbita moschata]1.2e-5172.63Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNP--RDSNQNRM----YRLPEPPQGRLPEEEEEDVYRG--AATAAALSRNSSVSSTASGF
        M D YSKIKAA KFKSRSIDYSDL+SLPH+ RFNAA + SNP   DSN+N+      RLPE  +    EEEEED Y G  +A AAALSRN+SVSS+ SGF
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNP--RDSNQNRM----YRLPEPPQGRLPEEEEEDVYRG--AATAAALSRNSSVSSTASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVR--IKKKKKNAAGKIVKACKRLFGL
        HSAVKRALSMRRSSSVAERYCRIHDQF TLASPIDDDE+E GDSKE  KTGGSV+   KKKKKN+A KIV+ACKRLFG+
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVR--IKKKKKNAAGKIVKACKRLFGL

TrEMBL top hitse value%identityAlignment
A0A0A0L2N9 Uncharacterized protein8.7e-5373.45Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAA-LSRNSSVSSTASGFH
        M DGYSKIKAA KFKSRSIDYSDLSSLPH+L F+AAV       SN  R  R  EPP GRLPEE+EE      D  RGA TAAA L RNSSVSS+ SGF 
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAA-LSRNSSVSSTASGFH

Query:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGS-VRIKKKKKNAAGKIVKACKRLFGL
        SAVKRALSMRRSSSVAERYCRIHDQF T ASPI+DDE+EGGD KE GK GGS +R KKKKKNAA KIV+ACKR+FGL
Subjt:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGS-VRIKKKKKNAAGKIVKACKRLFGL

A0A5A7V402 Uncharacterized protein4.1e-5071.93Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRF-NAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAALSRNSSVSSTASGFH
        M DGYSKIKAA KFKSRSIDYSDLSSLPH+L F NAAVS+     SN +R  R  EPP  RLPEE+EE      D  RG   AA LSRNSSVSS+ SGF 
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRF-NAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEE------DVYRGAATAAALSRNSSVSSTASGFH

Query:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACK
        SAVKRALSMRRSSSVAERYCRIHDQF T ASPI+DDE+EGGDSKE GK GGS   KKKK NAAGKIV+A +
Subjt:  SAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACK

A0A5N6QLE4 Uncharacterized protein2.9e-2450.3Show/hide
Query:  DGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEEDVYRGAATAAALSRNSSVSSTASGFHSAVKRALSM
        +GYSK+KA    KSRS+D+SD  S     + N+  + S P + +Q +             E+E+ D   G    A LSR+ SVSST SGF SAVKRA S+
Subjt:  DGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEEDVYRGAATAAALSRNSSVSSTASGFHSAVKRALSM

Query:  RRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACKRLFGL
        +RSSSV+ERYCRI+DQ VTLASPIDDD+ EG D+    +     R  KKKK+  GKI+KACKRLFGL
Subjt:  RRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACKRLFGL

A0A6J1C4C9 uncharacterized protein LOC1110083715.3e-5072.67Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSN--PRDSNQNRMYRLPEPPQGRLPEEEEEDVYRGAATA-AALSRNSSVSSTASGFHSAVK
        M DGYSKIKAA KFKSRSIDYSDL+SLPH+L+F AAV + N    +S+QNR  R     Q  LPEEEE++   G   A AALSRNSSVSS+ASG HSAVK
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSN--PRDSNQNRMYRLPEPPQGRLPEEEEEDVYRGAATA-AALSRNSSVSSTASGFHSAVK

Query:  RALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACKRLFGL
        RALSMRRSSSVAERYCRIHDQF TLASPIDD+EI  GDSKE  K+ GSVR  +KKKNAAGKIV+ACKRLFGL
Subjt:  RALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACKRLFGL

A0A6J1ERE9 uncharacterized protein LOC1114358635.7e-5272.63Show/hide
Query:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNP--RDSNQNRM----YRLPEPPQGRLPEEEEEDVYRG--AATAAALSRNSSVSSTASGF
        M D YSKIKAA KFKSRSIDYSDL+SLPH+ RFNAA + SNP   DSN+N+      RLPE  +    EEEEED Y G  +A AAALSRN+SVSS+ SGF
Subjt:  MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNP--RDSNQNRM----YRLPEPPQGRLPEEEEEDVYRG--AATAAALSRNSSVSSTASGF

Query:  HSAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVR--IKKKKKNAAGKIVKACKRLFGL
        HSAVKRALSMRRSSSVAERYCRIHDQF TLASPIDDDE+E GDSKE  KTGGSV+   KKKKKN+A KIV+ACKRLFG+
Subjt:  HSAVKRALSMRRSSSVAERYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVR--IKKKKKNAAGKIVKACKRLFGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G24275.1 Identified as a screen for stress-responsive genes.1.4e-1049.47Show/hide
Query:  LSRNSSVSSTASGFHSAVKRALSMRRSSSVAERYCRIHDQFVTLASPI---DDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGK-IVKACKRLFGL
        LSRN SVS++A    S +K  +SMRRSSSV+ERYCRI+DQ      P+   + DE E  D KE       V  KKK  N   K  VKACKR FG+
Subjt:  LSRNSSVSSTASGFHSAVKRALSMRRSSSVAERYCRIHDQFVTLASPI---DDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGK-IVKACKRLFGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGATGGCTACTCCAAAATCAAAGCGGCCGGCAAATTCAAATCAAGATCTATAGATTACTCCGATCTGTCCTCGCTCCCTCACGCTCTCAGATTCAACGCGGCCGT
CTCCCATTCGAATCCTCGTGATTCCAATCAGAACAGGATGTATCGGCTACCGGAGCCGCCGCAAGGCCGCTTGCCGGAGGAGGAGGAAGAAGACGTTTACCGTGGTGCCG
CCACCGCGGCTGCGCTGAGTCGGAACAGCTCTGTTTCTTCAACGGCCTCCGGATTCCACTCGGCGGTGAAGAGAGCTCTGTCGATGCGGCGATCTTCGTCTGTGGCGGAG
AGGTACTGTAGGATTCACGATCAGTTCGTGACGCTTGCATCGCCGATCGACGATGATGAAATCGAAGGGGGAGATTCGAAGGAAGGGGGAAAAACAGGAGGATCTGTGAG
GATAAAGAAGAAGAAGAAGAACGCAGCAGGGAAGATCGTTAAAGCCTGTAAGCGACTTTTTGGACTGTAG
mRNA sequenceShow/hide mRNA sequence
GTTTTTTCCGATATCTAAATTCAACATTAAAGTTTCAAGCTGCCATTTCTAAAGAAAAATTTACAGGGATCGTCCATTTAAATAGCTCTGAAAATATTTTATCGTATCAT
AAGTATTTCTCACAACTTTCAGCCATAATCTTCTCCGAATCTTCAAATTCTAGAGACAGAAAAATGACCGATGGCTACTCCAAAATCAAAGCGGCCGGCAAATTCAAATC
AAGATCTATAGATTACTCCGATCTGTCCTCGCTCCCTCACGCTCTCAGATTCAACGCGGCCGTCTCCCATTCGAATCCTCGTGATTCCAATCAGAACAGGATGTATCGGC
TACCGGAGCCGCCGCAAGGCCGCTTGCCGGAGGAGGAGGAAGAAGACGTTTACCGTGGTGCCGCCACCGCGGCTGCGCTGAGTCGGAACAGCTCTGTTTCTTCAACGGCC
TCCGGATTCCACTCGGCGGTGAAGAGAGCTCTGTCGATGCGGCGATCTTCGTCTGTGGCGGAGAGGTACTGTAGGATTCACGATCAGTTCGTGACGCTTGCATCGCCGAT
CGACGATGATGAAATCGAAGGGGGAGATTCGAAGGAAGGGGGAAAAACAGGAGGATCTGTGAGGATAAAGAAGAAGAAGAAGAACGCAGCAGGGAAGATCGTTAAAGCCT
GTAAGCGACTTTTTGGACTGTAGTTTTGAAATTGATGAGCATTTTATAAAATACCGAATCCGTAAAGTATCTTTTCATCTTTTCAATCTTTTCAATCTATTTCTCTATTT
CTCTTCTCTGATTATTACTTCTCAGTCGTTTTTGCGCTGAGAAATGAGAGTGTCTGTTTTGATTGATTGTCCTCGGAGATCGATGTGGTTCGTCGATTTAAGAAGTAATG
GCG
Protein sequenceShow/hide protein sequence
MTDGYSKIKAAGKFKSRSIDYSDLSSLPHALRFNAAVSHSNPRDSNQNRMYRLPEPPQGRLPEEEEEDVYRGAATAAALSRNSSVSSTASGFHSAVKRALSMRRSSSVAE
RYCRIHDQFVTLASPIDDDEIEGGDSKEGGKTGGSVRIKKKKKNAAGKIVKACKRLFGL