; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006258 (gene) of Snake gourd v1 genome

Gene IDTan0006258
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionC2H2-type domain-containing protein
Genome locationLG04:2070424..2070819
RNA-Seq ExpressionTan0006258
SyntenyTan0006258
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600035.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia]2.9e-5888.98Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN
        MAETHHLWRQILNYSNTFK +PSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNR F IKPTPTLDLQ + F PKN+
Subjt:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN

Query:  RSDSAGLCVKRAKVCVSEEQLDLDLDL
        RSDS G C+KRAKVCVSEEQLDL+L L
Subjt:  RSDSAGLCVKRAKVCVSEEQLDLDLDL

XP_004151402.2 zinc finger protein 11 [Cucumis sativus]1.5e-3867.14Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKP-TPTLDLQTHHFSPK
        MA+TH LWRQIL      KTT  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PNRPFFIKP TPT DL THHFSPK
Subjt:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKP-TPTLDLQTHHFSPK

Query:  NNRSDSAGLCVKRAKVC-------VSEEQLDLDLDLELKL
        NN  DS    +K+ K+         S    +L LDLELKL
Subjt:  NNRSDSAGLCVKRAKVC-------VSEEQLDLDLDLELKL

XP_008461701.1 PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]6.7e-3970.15Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RPFFIKPTPTLDLQTHHFSPK
        MAETH +WRQIL      KTT  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PN RPFFIKPTPT DL THHFSPK
Subjt:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RPFFIKPTPTLDLQTHHFSPK

Query:  NNRSDSAGL-CVKRAKVCVSEEQLDLDLDLELKL
        NN S    L   K A    S    +L LDLELKL
Subjt:  NNRSDSAGL-CVKRAKVCVSEEQLDLDLDLELKL

XP_022988302.1 zinc finger protein 10-like [Cucurbita maxima]1.2e-5990.55Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN
        MAETHHLWRQILNYSNTFK +PSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNR F IKPTPTLDLQTH F PKN+
Subjt:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN

Query:  RSDSAGLCVKRAKVCVSEEQLDLDLDL
        RSDS G C+KRAKVCVSEEQLDL+L L
Subjt:  RSDSAGLCVKRAKVCVSEEQLDLDLDL

XP_023542190.1 zinc finger protein 10-like [Cucurbita pepo subsp. pepo]3.1e-6091.34Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN
        MAETHHLWRQILNYSNTFK +PSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNR F IKPTPTLDLQTH F PKNN
Subjt:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN

Query:  RSDSAGLCVKRAKVCVSEEQLDLDLDL
        RSDS G C+KRAKVCVSEEQLDL+L L
Subjt:  RSDSAGLCVKRAKVCVSEEQLDLDLDL

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ3 C2H2-type domain-containing protein7.3e-3967.14Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKP-TPTLDLQTHHFSPK
        MA+TH LWRQIL      KTT  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PNRPFFIKP TPT DL THHFSPK
Subjt:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKP-TPTLDLQTHHFSPK

Query:  NNRSDSAGLCVKRAKVC-------VSEEQLDLDLDLELKL
        NN  DS    +K+ K+         S    +L LDLELKL
Subjt:  NNRSDSAGLCVKRAKVC-------VSEEQLDLDLDLELKL

A0A1S3CGM6 transcriptional regulator SUPERMAN-like3.3e-3970.15Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RPFFIKPTPTLDLQTHHFSPK
        MAETH +WRQIL      KTT  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PN RPFFIKPTPT DL THHFSPK
Subjt:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RPFFIKPTPTLDLQTHHFSPK

Query:  NNRSDSAGL-CVKRAKVCVSEEQLDLDLDLELKL
        NN S    L   K A    S    +L LDLELKL
Subjt:  NNRSDSAGL-CVKRAKVCVSEEQLDLDLDLELKL

A0A5A7UA35 Transcriptional regulator SUPERMAN-like3.3e-3970.15Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RPFFIKPTPTLDLQTHHFSPK
        MAETH +WRQIL      KTT  W +EKAFA+D  AAVWPPRSYSC FCMRQFRSAQALGGHMNVHRRDRA+LQN+PN RPFFIKPTPT DL THHFSPK
Subjt:  MAETHHLWRQILNYSNTFKTTPSW-EEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPN-RPFFIKPTPTLDLQTHHFSPK

Query:  NNRSDSAGL-CVKRAKVCVSEEQLDLDLDLELKL
        NN S    L   K A    S    +L LDLELKL
Subjt:  NNRSDSAGL-CVKRAKVCVSEEQLDLDLDLELKL

A0A6J1CVW0 transcriptional regulator SUPERMAN-like3.1e-2161.96Show/hide
Query:  NTFKTTPSWEEKAFAEDTAAA------VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNNR
        ++F+   SWEE+AFAED AAA      VWPPRSYSC+FC R+FRSAQALGGHMNVHRRDRARL+ +PN   F   TPTL  Q   FSP +++
Subjt:  NTFKTTPSWEEKAFAEDTAAA------VWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNNR

A0A6J1JCP1 zinc finger protein 10-like5.7e-6090.55Show/hide
Query:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN
        MAETHHLWRQILNYSNTFK +PSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNR F IKPTPTLDLQTH F PKN+
Subjt:  MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN

Query:  RSDSAGLCVKRAKVCVSEEQLDLDLDL
        RSDS G C+KRAKVCVSEEQLDL+L L
Subjt:  RSDSAGLCVKRAKVCVSEEQLDLDLDL

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 101.1e-1861.11Show/hide
Query:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTH
        SWEE AFAED AA ++WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRARL+   ++  F K + + +  +H
Subjt:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTH

Q38895 Transcriptional regulator SUPERMAN2.3e-1353.42Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ--------NNPNRPFFIKPTPTLDLQTHHFSPKNNRS
        WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRARL+        + P+ P+   P P     T   SP  + S
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ--------NNPNRPFFIKPTPTLDLQTHHFSPKNNRS

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.0e-1360.32Show/hide
Query:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRP
        P  EE+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRARL+     P
Subjt:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRP

Q9SLB8 Zinc finger protein 111.5e-1253.97Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN
        WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRA+L+  P+  F          + HH +P  N
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN

Q9SR34 Transcriptional regulator TAC18.3e-0872.73Show/hide
Query:  RSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ
        RSY C+FC+R F +AQALGGHMN+HRRDRA+L+
Subjt:  RSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 107.5e-2061.11Show/hide
Query:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTH
        SWEE AFAED AA ++WPPRSY+C+FC R+F+SAQALGGHMNVHRRDRARL+   ++  F K + + +  +H
Subjt:  SWEEKAFAEDTAA-AVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTH

AT2G42410.1 zinc finger protein 111.0e-1353.97Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN
        WPP++Y+C+FC R+FRSAQALGGHMNVHRRDRA+L+  P+  F          + HH +P  N
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNN

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.6e-1453.42Show/hide
Query:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ--------NNPNRPFFIKPTPTLDLQTHHFSPKNNRS
        WPPRSY+C+FC R+FRSAQALGGHMNVHRRDRARL+        + P+ P+   P P     T   SP  + S
Subjt:  WPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQ--------NNPNRPFFIKPTPTLDLQTHHFSPKNNRS

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein5.9e-1773.08Show/hide
Query:  SWEEKAFAEDT----AAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA
        SWE KAF +DT    +   WPPRSY+CNFC R+FRSAQALGGHMNVHRRDRA
Subjt:  SWEEKAFAEDT----AAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRA

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein7.2e-1560.32Show/hide
Query:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRP
        P  EE+AFA           +WPPRSYSC+FC R+F+SAQALGGHMNVHRRDRARL+     P
Subjt:  PSWEEKAFAE-----DTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAACCCATCATCTATGGAGACAAATCCTCAACTACTCGAACACCTTCAAAACGACACCGTCATGGGAAGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGT
CTGGCCGCCGAGATCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGCGGCCACATGAACGTCCATCGTAGAGACCGTGCTCGACTCCAAA
ACAATCCCAACCGTCCATTTTTCATCAAACCAACTCCCACCCTTGATCTTCAAACTCACCATTTTTCTCCCAAAAACAACAGATCAGATTCTGCTGGGCTCTGTGTCAAA
AGAGCCAAAGTTTGTGTTTCTGAAGAGCAGCTTGACCTTGACCTTGACCTTGAGCTCAAGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAACCCATCATCTATGGAGACAAATCCTCAACTACTCGAACACCTTCAAAACGACACCGTCATGGGAAGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGT
CTGGCCGCCGAGATCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGCGGCCACATGAACGTCCATCGTAGAGACCGTGCTCGACTCCAAA
ACAATCCCAACCGTCCATTTTTCATCAAACCAACTCCCACCCTTGATCTTCAAACTCACCATTTTTCTCCCAAAAACAACAGATCAGATTCTGCTGGGCTCTGTGTCAAA
AGAGCCAAAGTTTGTGTTTCTGAAGAGCAGCTTGACCTTGACCTTGACCTTGAGCTCAAGCTATAG
Protein sequenceShow/hide protein sequence
MAETHHLWRQILNYSNTFKTTPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRPFFIKPTPTLDLQTHHFSPKNNRSDSAGLCVK
RAKVCVSEEQLDLDLDLELKL