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Tan0006268 (gene) of Snake gourd v1 genome

Gene IDTan0006268
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionsperm mitochondrial-associated cysteine-rich protein-like
Genome locationLG01:85797307..85797714
RNA-Seq ExpressionTan0006268
SyntenyTan0006268
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607747.1 hypothetical protein SDJN03_01089, partial [Cucurbita argyrosperma subsp. sororia]6.5e-4579.55Show/hide
Query:  PAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPP--PPPRPNG-N
        PAK LALV+VFHLKSAI+AADDA+MPTP SC NC +CQSACRPPP    P     PPPPPIAEPEPLPVPV P NCPPTIVQCCQF+PP  PPP PNG N
Subjt:  PAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPP--PPPRPNG-N

Query:  IYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
        IYTPFYNES SSFLK GLVSVLAPVFG+AAIF
Subjt:  IYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

KAG7037325.1 hypothetical protein SDJN02_00950, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-4580.3Show/hide
Query:  PAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPP--PPPRPNG-N
        PAK LALV+VFHLKSAI+AADDA+MPTP SC NC +CQSACRPPP    P     PPPPPIAEPEPLPVPV PANCPPTIVQCCQF+PP  PPP PNG N
Subjt:  PAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPP--PPPRPNG-N

Query:  IYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
        IYTPFYNES SSFLK GLVSVLAPVFG+AAIF
Subjt:  IYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

KGN44024.1 hypothetical protein Csa_011878 [Cucumis sativus]6.7e-4273.33Show/hide
Query:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----
        FPAK+LALVVVF+L +A+SA DDA MPTPISC NCTICQS C PPP+   P   + PPP P AEPEPLP PVAPANCPPTIVQCCQFLPPPPP P     
Subjt:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----

Query:  NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
        NGN+YTP YN SSSSFL+ GL S LAPVFGL AIF
Subjt:  NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

XP_008463043.1 PREDICTED: sperm mitochondrial-associated cysteine-rich protein-like [Cucumis melo]1.2e-4375Show/hide
Query:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP-PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP----
        FPAK+LALVVVF+L SA+SA DDA M TPISC NCTICQS CRPP +   P     PPPP P AEPEPLP+PVAPANCPPTIVQCCQFLPPPPP P    
Subjt:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP-PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP----

Query:  -NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
         NGNIYTP YNESSSSFL+ GL S LAPVFGL AIF
Subjt:  -NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

XP_011659730.1 leucine-rich repeat extensin-like protein 3 [Cucumis sativus]6.7e-4273.33Show/hide
Query:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----
        FPAK+LALVVVF+L +A+SA DDA MPTPISC NCTICQS C PPP+   P   + PPP P AEPEPLP PVAPANCPPTIVQCCQFLPPPPP P     
Subjt:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----

Query:  NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
        NGN+YTP YN SSSSFL+ GL S LAPVFGL AIF
Subjt:  NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

TrEMBL top hitse value%identityAlignment
A0A0A0K536 Uncharacterized protein3.2e-4273.33Show/hide
Query:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----
        FPAK+LALVVVF+L +A+SA DDA MPTPISC NCTICQS C PPP+   P   + PPP P AEPEPLP PVAPANCPPTIVQCCQFLPPPPP P     
Subjt:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP-----

Query:  NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
        NGN+YTP YN SSSSFL+ GL S LAPVFGL AIF
Subjt:  NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

A0A1S3CI95 sperm mitochondrial-associated cysteine-rich protein-like5.9e-4475Show/hide
Query:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP-PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP----
        FPAK+LALVVVF+L SA+SA DDA M TPISC NCTICQS CRPP +   P     PPPP P AEPEPLP+PVAPANCPPTIVQCCQFLPPPPP P    
Subjt:  FPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPP-PIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRP----

Query:  -NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
         NGNIYTP YNESSSSFL+ GL S LAPVFGL AIF
Subjt:  -NGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

A0A443NET1 Nitrile-specifier protein 52.6e-0744.57Show/hide
Query:  DATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPT-IVQCCQFLPPPPPRPNGNIYTPFYNESSSSFLK
        D  +P+P++C NC++CQ  C P P +T P Y+   PPP    P P P    P+NCPP+   QCCQ  PP PP P  NI  P+YN  +S  L+
Subjt:  DATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPT-IVQCCQFLPPPPPRPNGNIYTPFYNESSSSFLK

A0A6A1VX00 4Fe-4S ferredoxin-type domain-containing protein1.1e-0537.23Show/hide
Query:  SAISAADDATMPTPISCANCTICQSACR-------------------PPPASTS--PTYE-ALPPPPPIAEPEPLPVPVAPANCPP-TIVQCCQFLPPPP
        SA   A    +P+P +C NCT+CQ  C                    PPP S +  P YE + PPPPP   P  LP   A  NCPP T+VQCCQ+   PP
Subjt:  SAISAADDATMPTPISCANCTICQSACR-------------------PPPASTS--PTYE-ALPPPPPIAEPEPLPVPVAPANCPP-TIVQCCQFLPPPP

Query:  PRPNGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAI
        P   G  Y P+ N S+S       + V+  VF  A +
Subjt:  PRPNGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAI

W9QFT0 Uncharacterized protein1.1e-0839.86Show/hide
Query:  AKILALVVV----FHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPP----IAEPEPLPVPVAP--ANCPPTIVQCCQFLPPPP
        AK++ ++ V    F L  A   + DA +P+P  C NCT+CQ  C  PPAS +P+Y A PPPPP    +    PLP P  P    CPPT +QCCQ+ PPPP
Subjt:  AKILALVVV----FHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPP----IAEPEPLPVPVAP--ANCPPTIVQCCQFLPPPP

Query:  PRPNGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF
              +Y P YN +    L   L  ++  +F  A  F
Subjt:  PRPNGNIYTPFYNESSSSFLKGGLVSVLAPVFGLAAIF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCCGGTTAGATTTCCGGCCAAAATCCTGGCTCTGGTCGTCGTTTTCCACCTCAAGTCCGCCATCTCTGCCGCCGACGACGCCACCATGCCCACACCCATCTCCTG
CGCCAACTGCACCATTTGTCAATCCGCCTGCCGCCCTCCGCCGGCCTCAACTTCTCCGACGTATGAGGCACTGCCACCACCGCCGCCGATTGCAGAGCCAGAGCCATTGC
CAGTGCCGGTTGCTCCGGCGAACTGCCCTCCCACTATTGTCCAGTGCTGCCAGTTTCTGCCGCCACCACCGCCGCGGCCGAATGGTAATATATACACGCCGTTTTATAAT
GAGTCGTCGTCTTCATTTTTGAAAGGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTCCGGTTAGATTTCCGGCCAAAATCCTGGCTCTGGTCGTCGTTTTCCACCTCAAGTCCGCCATCTCTGCCGCCGACGACGCCACCATGCCCACACCCATCTCCTG
CGCCAACTGCACCATTTGTCAATCCGCCTGCCGCCCTCCGCCGGCCTCAACTTCTCCGACGTATGAGGCACTGCCACCACCGCCGCCGATTGCAGAGCCAGAGCCATTGC
CAGTGCCGGTTGCTCCGGCGAACTGCCCTCCCACTATTGTCCAGTGCTGCCAGTTTCTGCCGCCACCACCGCCGCGGCCGAATGGTAATATATACACGCCGTTTTATAAT
GAGTCGTCGTCTTCATTTTTGAAAGGTGGGTTGGTCTCTGTTTTGGCCCCTGTTTTTGGGTTGGCCGCCATTTTCTGA
Protein sequenceShow/hide protein sequence
MSPVRFPAKILALVVVFHLKSAISAADDATMPTPISCANCTICQSACRPPPASTSPTYEALPPPPPIAEPEPLPVPVAPANCPPTIVQCCQFLPPPPPRPNGNIYTPFYN
ESSSSFLKGGLVSVLAPVFGLAAIF