; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006298 (gene) of Snake gourd v1 genome

Gene IDTan0006298
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionProtein NUCLEAR FUSION DEFECTIVE 6
Genome locationLG08:1383319..1386042
RNA-Seq ExpressionTan0006298
SyntenyTan0006298
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586435.1 hypothetical protein SDJN03_19168, partial [Cucurbita argyrosperma subsp. sororia]9.0e-3691.92Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELSSQGSLMPLHSAI++ARLISSL IESRGWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

KAG7021289.1 hypothetical protein SDJN02_17977 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-3692.93Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELSSQGSLMPLHSAIA+ARLISSL IESRGWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

XP_022966032.1 uncharacterized protein LOC111465737 [Cucurbita maxima]2.4e-3692.93Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASL+AVSR+SSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

XP_023538189.1 uncharacterized protein LOC111799036 [Cucurbita pepo subsp. pepo]2.4e-3693.94Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSL IESRGWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

XP_023547330.1 uncharacterized protein LOC111806185 [Cucurbita pepo subsp. pepo]9.0e-3690.91Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS+CQSQPSAASTSR+SCTSRLPLELSSQGSLMPLHSAIA+ARLISSL+IES+GWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

TrEMBL top hitse value%identityAlignment
A0A0A0LKT5 Uncharacterized protein2.8e-3590.91Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASLKAVSRLSSRL SLA K NKRSSSSEL  FKSTCQSQPSAASTSRL CTSRLP+ELSSQGSLMPLHSAIA+ARLISSLTIES+GWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

A0A6J1FCN7 uncharacterized protein LOC1114444074.8e-3591.92Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASLKAVSRLSSRLHSLASKLNKRSSSS+ SPFKST QS+ SA STSRLSCTSRLPLELSSQGSLMPLHSAIA+ARLISSL IESRGWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

A0A6J1G399 uncharacterized protein LOC1114503805.7e-3690.91Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS CQSQPSAASTSR+SCTSRLPLELSSQGSLMPLHSAIA+ARLISSL+IES+GWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

A0A6J1HLX3 uncharacterized protein LOC1114657371.1e-3692.93Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASL+AVSR+SSRLHSLASKLNKRSSSS+ SPFKSTCQS+ SA STSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

A0A6J1KDE2 uncharacterized protein LOC1114938762.2e-3589.9Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        MASL+AVSRLSSRL SLA KLNKRS SSELSPFKS+CQSQPSAAS SR+SCTSRLPLELSSQGSLMPLHSAIA+ARLISSL+IES+GWGLVPQGISMPL
Subjt:  MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55205.1 unknown protein2.8e-1961.39Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRS--SSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMP
        MAS   + RLSS++HSL  KL+K +   SS  SP KS   S PS+A TSR++ + RLP+ELS   S++PLHSAIASARLISSL++ES+ WGLVPQGISMP
Subjt:  MASLKAVSRLSSRLHSLASKLNKRS--SSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMP

Query:  L
        L
Subjt:  L

AT1G55205.2 unknown protein1.3e-1659.18Show/hide
Query:  MASLKAVSRLSSRLHSLASKLNKRS--SSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGIS
        MAS   + RLSS++HSL  KL+K +   SS  SP KS   S PS+A TSR++ + RLP+ELS   S++PLHSAIASARLISSL++ES+ WGLVPQG S
Subjt:  MASLKAVSRLSSRLHSLASKLNKRS--SSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGIS

AT3G13674.1 unknown protein7.6e-1756.44Show/hide
Query:  MASLKAVSRLSSRLHSLASKL-NKRSSSSEL-SPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMP
        MAS + + R SSRL SL   L NK ++ S L SP KS   + PS+A++ RL+ +SRLP+ELS   S++PLHSAIAS+RL+SSL++ES+ WGLVPQG+S+P
Subjt:  MASLKAVSRLSSRLHSLASKL-NKRSSSSEL-SPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMP

Query:  L
        L
Subjt:  L

AT4G39300.1 unknown protein3.0e-0539.39Show/hide
Query:  ASLKAVSR-LSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL
        ++L A SR L SR  ++  K      ++  SPF S  QS P A         SR+   L S  +++PLHSA+ASARL SS+  +S  W L+ QG++ PL
Subjt:  ASLKAVSR-LSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL

AT4G39300.2 unknown protein5.7e-0437.76Show/hide
Query:  ASLKAVSR-LSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMP
        ++L A SR L SR  ++  K      ++  SPF S  QS P A         SR+   L S  +++PLHSA+ASARL SS+  +S  W L+ Q + +P
Subjt:  ASLKAVSR-LSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTTAAAGGCTGTATCTCGGTTATCATCTCGCTTGCACTCTCTCGCTTCAAAGCTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCGTTCAAATCTACTTG
TCAATCTCAGCCCTCCGCAGCTTCTACATCGCGTCTTTCTTGCACTTCGCGGTTACCATTGGAGTTGAGTAGCCAGGGGTCACTGATGCCATTGCACAGCGCCATAGCTT
CAGCAAGATTGATTTCGAGTCTGACCATTGAATCTCGAGGGTGGGGTTTAGTTCCTCAGGGTATTTCAATGCCTTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTTAAAGGCTGTATCTCGGTTATCATCTCGCTTGCACTCTCTCGCTTCAAAGCTCAACAAAAGATCTTCATCTTCTGAGCTATCTCCGTTCAAATCTACTTG
TCAATCTCAGCCCTCCGCAGCTTCTACATCGCGTCTTTCTTGCACTTCGCGGTTACCATTGGAGTTGAGTAGCCAGGGGTCACTGATGCCATTGCACAGCGCCATAGCTT
CAGCAAGATTGATTTCGAGTCTGACCATTGAATCTCGAGGGTGGGGTTTAGTTCCTCAGGGTATTTCAATGCCTTTATGA
Protein sequenceShow/hide protein sequence
MASLKAVSRLSSRLHSLASKLNKRSSSSELSPFKSTCQSQPSAASTSRLSCTSRLPLELSSQGSLMPLHSAIASARLISSLTIESRGWGLVPQGISMPL