CuGenDBv2

Gene ID	Tan0006331
Organism	Trichosanthes anguina (Snake gourd v1)
Description	ferredoxin-thioredoxin reductase, variable chain
Genome location	LG04:3810576..3811655
RNA-Seq Expression	Tan0006331
Synteny	Tan0006331
Gene Ontology terms	GO:0015979 - photosynthesis (biological process) GO:0016310 - phosphorylation (biological process) GO:0030148 - sphingolipid biosynthetic process (biological process) GO:0003951 - NAD+ kinase activity (molecular function) GO:0017050 - D-erythro-sphingosine kinase activity (molecular function)
InterPro domains	IPR004207 - Ferredoxin thioredoxin reductase, alpha chain IPR008990 - Electron transport accessory-like domain superfamily IPR044166 - Ferredoxin-thioredoxin reductase, variable chain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0034101.1 sphingoid long-chain bases kinase 1 [Cucumis melo var. makuwa]

8.1e-75

87.85

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS  AR ACSMTVFS+ DV+SS+SSSV SLSSVVVNPFN SIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

XP_004147092.1 ferredoxin-thioredoxin reductase, variable chain [Cucumis sativus]

4.3e-76

90.06

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MISIA+SIGVIPSPAP+SAS  AR ACSMTVFS+ DVKSS+SSSV SLSS+VVNPFN SIRRGRR+FSEV VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

XP_008445916.1 PREDICTED: ferredoxin-thioredoxin reductase, variable chain [Cucumis melo]

8.1e-75

87.85

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS  AR ACSMTVFS+ DV+SS+SSSV SLSSVVVNPFN SIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

XP_023549490.1 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like [Cucurbita pepo subsp. pepo]

5.2e-74

88.4

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI++A+SIGVIP+PAP +    ARPACSMTVFSS D KSSYS SVSSLSSVVVNPFN SIRRGRR FSEVTV+SDSGT SSA AVSAATTSLSE+ET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

XP_038893043.1 ferredoxin-thioredoxin reductase, variable chain-like [Benincasa hispida]

5.0e-77

91.16

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MISIA+SIGVIP+PAP+SASA AR ACSMTVFS  DVKSSYSSSV SLSSVVVNPFN SIRRGRR+FSEV VRSDSGTS SATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEY+
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KV36 FeThRed_A domain-containing protein

2.1e-76

90.06

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MISIA+SIGVIPSPAP+SAS  AR ACSMTVFS+ DVKSS+SSSV SLSS+VVNPFN SIRRGRR+FSEV VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLP+A+LEGMEGV+KDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

A0A1S3BEI2 ferredoxin-thioredoxin reductase, variable chain

3.9e-75

87.85

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS  AR ACSMTVFS+ DV+SS+SSSV SLSSVVVNPFN SIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

A0A5D3D039 Sphingoid long-chain bases kinase 1

3.9e-75

87.85

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI IA+SIG++P P P+SAS  AR ACSMTVFS+ DV+SS+SSSV SLSSVVVNPFN SIRRGRR+FSEV+VRSDSGTSSSATAVSAATTSLSEEET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEA+LEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPP+KF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

A0A6J1H0Z6 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

1.3e-73

87.85

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI++A+SIGVIP+PAP +    ARPACSMTVFSS D KSSYS SVSSLSSVVVNPFN SI RGRR FSEVTV+SDSGT SSA AVSAATTSLSE+ET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

A0A6J1KDF2 ferredoxin-thioredoxin reductase, variable chain, chloroplastic-like

6.2e-73

87.29

Show/hide

Query:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA
        MI++A+SIGVIP+PAP +    ARPACSMTVFSS D KSSYSSSVSSLSSVVVNPFN SI RGRR FSEVTV+SDSGT SSA AVSAA TSLSE+ET EA
Subjt:  MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEA

Query:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        AAARIGARVRVKVPL VYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKF+AHLKEEEFEYV
Subjt:  AAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

SwissProt top hits

e value

%identity

Alignment

P38365 Ferredoxin-thioredoxin reductase, variable chain, chloroplastic

2.7e-17

38.73

Show/hide

Query:  IPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGR-RIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARV
        + S A A+++A A  A +  +   P   S  +SS +  S++       +  R R  I  EV ++SDS T       S++++   E+E  +    ++G +V
Subjt:  IPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGR-RIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARV

Query:  RVKVPLKVYHVAKLPEADL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        +VK PLKVYHV KLPE +L   M GV+K YV  WKGK +S N P+KVE+ + V  R  VK + HLKEEEFE +
Subjt:  RVKVPLKVYHVAKLPEADL-EGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

P80680 Ferredoxin-thioredoxin reductase, variable chain

1.4e-24

61.05

Show/hide

Query:  ATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFIAHLKEEEFEYV
        A+  ++ EE   AAA +IG RVRV  PL+VYHV K P+ D++GMEGV+K YV VWKGKRV+AN P+KVEF + VEG+P PV+F AHL+E+EFE+V
Subjt:  ATTSLSEEETGEAAAARIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRP-PVKFIAHLKEEEFEYV

Arabidopsis top hits

e value

%identity

Alignment

AT5G08410.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 2

7.9e-28

45.51

Show/hide

Query:  APASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGR--------RIFSEVTVRSDSGTSSSATAVSAATTSLS---EEETGEAAAA
        +PA  +AV  PA    + ++     S   S++S SS +  P + S   GR        R   + T+R D    S+A+  + A  S S   E E  E A  
Subjt:  APASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGR--------RIFSEVTVRSDSGTSSSATAVSAATTSLS---EEETGEAAAA

Query:  RIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        +IGARVRV VPLKVYHV ++PE +L GMEG +KDYV +WKGK++SANLP+KV+FV  +EGR PVKF  HLKE+EFE +
Subjt:  RIGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

AT5G23440.1 ferredoxin/thioredoxin reductase subunit A (variable subunit) 1

3.2e-29

46.33

Show/hide

Query:  APASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGR------RIFSEVTVRSD----SGTSSSATAVSAATTSLSEEETGEAAAAR
        +PA A+A+ RP+    + +S    ++ +++  +L S +V P +    + +      R  S  T+R D    S  S +A A  +++ S SEEE    A A+
Subjt:  APASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGR------RIFSEVTVRSD----SGTSSSATAVSAATTSLSEEETGEAAAAR

Query:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV
        IG+RVRV  PLKVYHV ++PE DLEGMEG LKDYV VWKGKR+SANLPYK+EF   +EGR  VKF++HLKE+EFE++
Subjt:  IGARVRVKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCAGTATAGCAAGCAGTATCGGCGTGATACCATCGCCGGCGCCTGCGTCAGCGTCGGCGGTCGCTCGTCCCGCCTGTTCTATGACGGTATTCTCTAGTCCTGATGT
CAAATCGTCCTATTCATCATCCGTTAGTTCTCTATCGTCAGTAGTTGTTAATCCTTTCAACTTCTCGATTAGAAGAGGGAGAAGAATCTTTAGCGAGGTTACAGTCAGAT
CAGATTCCGGAACTTCATCTTCAGCTACTGCTGTTTCGGCGGCGACGACGTCATTGTCAGAGGAGGAGACTGGCGAAGCGGCTGCCGCTAGAATTGGAGCGAGAGTTAGG
GTTAAGGTGCCTTTGAAGGTGTATCATGTAGCTAAGTTGCCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTACGCGTTTGGAAGGGGAAGCGTGT
TTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCTCCGGTCAAATTCATCGCTCATCTCAAGGAGGAAGAATTTGAATACGTTTAA

mRNA sequence

Show/hide mRNA sequence

CAATAAGTCTGTGTGGACAGTGGCAATAAATTAATACAATAAAACTAAAGGAAGAGGAAAATTATGTAAATATTAAAAACTCGATACTATATAATTCCTTCTTCGGTGAA
CGACTCCACCGGCGACACAGAGATGATCAGTATAGCAAGCAGTATCGGCGTGATACCATCGCCGGCGCCTGCGTCAGCGTCGGCGGTCGCTCGTCCCGCCTGTTCTATGA
CGGTATTCTCTAGTCCTGATGTCAAATCGTCCTATTCATCATCCGTTAGTTCTCTATCGTCAGTAGTTGTTAATCCTTTCAACTTCTCGATTAGAAGAGGGAGAAGAATC
TTTAGCGAGGTTACAGTCAGATCAGATTCCGGAACTTCATCTTCAGCTACTGCTGTTTCGGCGGCGACGACGTCATTGTCAGAGGAGGAGACTGGCGAAGCGGCTGCCGC
TAGAATTGGAGCGAGAGTTAGGGTTAAGGTGCCTTTGAAGGTGTATCATGTAGCTAAGTTGCCGGAGGCGGATCTTGAGGGGATGGAAGGAGTGCTGAAGGACTATGTAC
GCGTTTGGAAGGGGAAGCGTGTTTCTGCTAATCTTCCGTATAAGGTGGAGTTTGTTGTTCCGGTTGAAGGCCGTCCTCCGGTCAAATTCATCGCTCATCTCAAGGAGGAA
GAATTTGAATACGTTTAATCAGGCATAATGAATCTTCAGACCAACGTAATTACTGTTTTTCCGATCTCAGTATTAATACCGAGCTTCCTTCTGCAGTATTGTTATCAACC
TTGTAAGGTTTGATCCTCTTCCATTTACATCCTTTACTCTTTGCCTTTGTAATGTAGAAAATTGCTCGAGTGTTTTTCTTTTGAGCTAATTGACTTTCTCGATTATCGAT
GGCTCTGTAAAATAATTGAACGAAGAGGTAAAAAATTTAGTCATCTAATACATTGTCGAATCAAATGGTTTCAAAATTGGTTACTCTTGTATGGCTGTTGTTTCGACCAC
TATTGTGGAGATAAATGCCTACTTGATTCTGGTGACTTGCCGCAGTTTGTATTTTGCTTTGAATAAGAAATTTATGTTTGTCCAAAAGAA

Protein sequence

Show/hide protein sequence

MISIASSIGVIPSPAPASASAVARPACSMTVFSSPDVKSSYSSSVSSLSSVVVNPFNFSIRRGRRIFSEVTVRSDSGTSSSATAVSAATTSLSEEETGEAAAARIGARVR
VKVPLKVYHVAKLPEADLEGMEGVLKDYVRVWKGKRVSANLPYKVEFVVPVEGRPPVKFIAHLKEEEFEYV

Tan0006331 (gene) of Snake gourd v1 genome