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Tan0006345 (gene) of Snake gourd v1 genome

Gene IDTan0006345
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG05:78034803..78035111
RNA-Seq ExpressionTan0006345
SyntenyTan0006345
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054012.1 hypothetical protein E6C27_scaffold318G00660 [Cucumis melo var. makuwa]8.7e-1056.1Show/hide
Query:  AQAPPPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS
        AQ   PLTRFSAI PPR+     R QIQITL TIYE+ETE K C+               +SSSS SSALS FRPL S+KCS
Subjt:  AQAPPPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS

KAE8653296.1 hypothetical protein Csa_023338 [Cucumis sativus]2.5e-1258.82Show/hide
Query:  TPAQAP-PPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS
        TP+  P  PLTRFSAIAPPR+     R  IQITL TIYE+ETE KIC+               + SSSFSSALSCFRPLRS+KCS
Subjt:  TPAQAP-PPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS

KAG6583881.1 hypothetical protein SDJN03_19813, partial [Cucurbita argyrosperma subsp. sororia]5.6e-1760.78Show/hide
Query:  MANNTLISSPKFILQNPETPAQAPPPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLK
        M NN   +SPK I  NP +  QA PPLTRFSAIAPPR  GG  R QIQ+TLQTIYEDE+E ++CRR      H + RK + S    S+ALSCFRPLRSLK
Subjt:  MANNTLISSPKFILQNPETPAQAPPPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLK

Query:  CS
        CS
Subjt:  CS

TrEMBL top hitse value%identityAlignment
A0A0A0M102 Uncharacterized protein1.2e-1258.82Show/hide
Query:  TPAQAP-PPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS
        TP+  P  PLTRFSAIAPPR+     R  IQITL TIYE+ETE KIC+               + SSSFSSALSCFRPLRS+KCS
Subjt:  TPAQAP-PPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS

A0A5D3DAX8 Uncharacterized protein4.2e-1056.1Show/hide
Query:  AQAPPPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS
        AQ   PLTRFSAI PPR+     R QIQITL TIYE+ETE K C+               +SSSS SSALS FRPL S+KCS
Subjt:  AQAPPPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATAACACTCTAATTTCTTCACCAAAATTCATCCTTCAAAACCCAGAAACTCCCGCCCAAGCACCGCCGCCGCTAACCCGATTTTCTGCAATTGCGCCCCCACG
CTACGGCGGCGGCGGTTACAGAGCCCAAATTCAAATCACTCTGCAGACCATATACGAAGACGAAACCGAGGCCAAAATCTGCCGCCGCCATTATTGTTATCATCATCATC
ATCATCATCGTAAACAAGCTTCTTCTTCTTCGTCTTTCTCCTCAGCTCTGTCCTGCTTTCGTCCTCTTCGATCATTGAAATGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATAACACTCTAATTTCTTCACCAAAATTCATCCTTCAAAACCCAGAAACTCCCGCCCAAGCACCGCCGCCGCTAACCCGATTTTCTGCAATTGCGCCCCCACG
CTACGGCGGCGGCGGTTACAGAGCCCAAATTCAAATCACTCTGCAGACCATATACGAAGACGAAACCGAGGCCAAAATCTGCCGCCGCCATTATTGTTATCATCATCATC
ATCATCATCGTAAACAAGCTTCTTCTTCTTCGTCTTTCTCCTCAGCTCTGTCCTGCTTTCGTCCTCTTCGATCATTGAAATGCTCTTGA
Protein sequenceShow/hide protein sequence
MANNTLISSPKFILQNPETPAQAPPPLTRFSAIAPPRYGGGGYRAQIQITLQTIYEDETEAKICRRHYCYHHHHHHRKQASSSSSFSSALSCFRPLRSLKCS