| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0035879.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-132 | 54.67 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L+ +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHS+LCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| TYK14550.1 gag/pol protein [Cucumis melo var. makuwa] | 9.5e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7SMH8 Gag/pol protein | 4.6e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| A0A5A7TU93 Gag/pol protein | 4.6e-132 | 54.67 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L+ +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHS+LCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| A0A5A7TWB9 Gag/pol protein | 4.6e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| A0A5A7V4M1 Gag/pol protein | 4.6e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| A0A5D3CPJ6 Gag/pol protein | 4.6e-132 | 54.88 | Show/hide |
Query: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
MFGQ S+ D+LKYI+NARM EG+SVREHVL+MM FN+AEMNGA DE+SQ T++LN G
Subjt: MFGQRSFFSPQDSLKYIFNARMKEGSSVREHVLDMMTRFNLAEMNGA-FDESSQ----------------------------TSILN-----------SG
Query: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Q EANVA+ + +H GST GTKS+ K + K+G K + AAA+ KK K A KG CFHCN GHWKRNCPK+LAE+K QGK DLLV
Subjt: QGIEANVASVS--YHGGSTCGTKSVAPLRPKGKKRMKRG----KTDRAAAQKGKKVKEVAEKGKCFHCNGSGHWKRNCPKFLAERK--NQGKCDLLV---
Query: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
GE+T+RVG+G +VSA A+G ++L +LLL+N+Y+VP RNL+S+ CL+E S++F +NK
Subjt: -----------------------------------GEVTLRVGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKA
Query: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
FI G ICSA LENNLYVL+ + K++LN E+FKTA T+ K+ KISPKEN HLWHLRL HIN+NRIE+LVK+GLL+ELEENSLPVCESCLEGKMTK P
Subjt: FISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCP
Query: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+GKG+RAKEPLELVHSDLCGPMNVKARGG+EYF++F DDYSRYGY+YLM KSE LEKFKEYK EVEN L K++KT RSDRGGEYMD +F+
Subjt: FSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| SwissProt top hits | e value | %identity | Alignment |
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| P04146 Copia protein | 2.3e-19 | 30.47 | Show/hide |
Query: GELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKK
GE + A G V+L + L D L+ NL+S+ L E +SI F+ + IS +N L V+K + + + + V F+ K
Subjt: GELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKK
Query: AKISPKENVHLWHLRLDHIN------VNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCPFSGKGYRA--KEPLELVHSDLCGPMNVKARGGYEYFVS
K N LWH R HI+ + R LLN L E S +CE CL GK + PF + K PL +VHSD+CGP+ YFV
Subjt: AKISPKENVHLWHLRLDHIN------VNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCPFSGKGYRA--KEPLELVHSDLCGPMNVKARGGYEYFVS
Query: FIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
F+D ++ Y YL+ KS+ F+++ + E + L D G EY+ E R
Subjt: FIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYMDTEFR
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 6.8e-24 | 27.66 | Show/hide |
Query: PLRPKGKKRMKRGKTDRAAAQKGKK--VKEVAEKGKCFHCNG-SGHW-KRNCPKFLAERKNQGKCDLLVGEV-TLRVGSGELVSAAAIGTVKLHFG-GKY
P + KG+ ++ + AA + V + E+ +C H +G W A C + G+ T+++G+ A IG + + G
Subjt: PLRPKGKKRMKRGKTDRAAAQKGKK--VKEVAEKGKCFHCNG-SGHW-KRNCPKFLAERKNQGKCDLLVGEV-TLRVGSGELVSAAAIGTVKLHFG-GKY
Query: LLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFKGNYICSASLENNLYVLKPNSIKSILNVELFKT-AETRTKKAKISPKE-NVHLWHLRLDH
L+L ++ VP NL+S ++ S+ N+ + KG+ + + K + L++T AE + + E +V LWH R+ H
Subjt: LLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFKGNYICSASLENNLYVLKPNSIKSILNVELFKT-AETRTKKAKISPKE-NVHLWHLRLDH
Query: INVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKE
++ ++ L K L++ + ++ C+ CL GK + F R L+LV+SD+CGPM +++ GG +YFV+FIDD SR ++Y++ K + + F++
Subjt: INVNRIEKLVKSGLLNELEENSLPVCESCLEGKMTKCPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVSFIDDYSRYGYIYLMHKKSETLEKFKE
Query: YKTEVENLLGKSLKTLRSDRGGEYMDTEF
+ VE G+ LK LRSD GGEY EF
Subjt: YKTEVENLLGKSLKTLRSDRGGEYMDTEF
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| Q12491 Transposon Ty2-B Gag-Pol polyprotein | 1.0e-11 | 26.51 | Show/hide |
Query: AIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKE
AIG + +F P +L+S+S L I+ F N S G + + Y L S K ++ + K K+K K
Subjt: AIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFKGNYICSASLENNLYVLKPNSIKSILNVELFKTAETRTKKAKISPKE
Query: NVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLP-------VCESCLEGKMTKCPFSGKGYRAK-----EPLELVHSDLCGPMNVKARGGYEYFVSFID
L H L H N I+K +K + L+E+ + C CL GK TK KG R K EP + +H+D+ GP++ + YF+SF D
Subjt: NVHLWHLRLDHINVNRIEKLVKSGLLNELEENSLP-------VCESCLEGKMTKCPFSGKGYRAK-----EPLELVHSDLCGPMNVKARGGYEYFVSFID
Query: DYSRYGYIYLMHKKSE--TLEKFKEYKTEVENLLGKSLKTLRSDRGGEY
+ +R+ ++Y +H + E L F ++N + ++ DRG EY
Subjt: DYSRYGYIYLMHKKSE--TLEKFKEYKTEVENLLGKSLKTLRSDRGGEY
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 2.6e-15 | 27.49 | Show/hide |
Query: VGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFK----GNYICSASLENNLYVLKPNSIKSILNVELFKT
V G + + G+ L + L L N+ VP +NL+S+ L + +S E A K G + ++ LY I S V LF
Subjt: VGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFK----GNYICSASLENNLYVLKPNSIKSILNVELFKT
Query: AETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELE-ENSLPVCESCLEGKMTKCPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVS
A S K WH RL H + + ++ + L+ L + C CL K K PFS + PLE ++SD+ + + Y Y+V
Subjt: AETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELE-ENSLPVCESCLEGKMTKCPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVS
Query: FIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYM
F+D ++RY ++Y + +KS+ E F +K +EN + T SD GGE++
Subjt: FIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYM
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.1e-13 | 26.29 | Show/hide |
Query: VGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFK----GNYICSASLENNLYVLKPNSIKSILNVELFKT
+ G + G+ L + L L+ + VP +NL+S+ L + +S E A K G + ++ LY I S V +F
Subjt: VGSGELVSAAAIGTVKLHFGGKYLLLDNLYIVPGFTRNLVSISCLIEHCISISFELNKAFISFK----GNYICSASLENNLYVLKPNSIKSILNVELFKT
Query: AETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELE-ENSLPVCESCLEGKMTKCPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVS
A K WH RL H ++ + ++ + L L + L C C K K PFS + +PLE ++SD+ + + Y Y+V
Subjt: AETRTKKAKISPKENVHLWHLRLDHINVNRIEKLVKSGLLNELE-ENSLPVCESCLEGKMTKCPFSGKGYRAKEPLELVHSDLCGPMNVKARGGYEYFVS
Query: FIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYM
F+D ++RY ++Y + +KS+ + F +K+ VEN + TL SD GGE++
Subjt: FIDDYSRYGYIYLMHKKSETLEKFKEYKTEVENLLGKSLKTLRSDRGGEYM
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