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Tan0006352 (gene) of Snake gourd v1 genome

Gene IDTan0006352
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG07:72588225..72591641
RNA-Seq ExpressionTan0006352
SyntenyTan0006352
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606331.1 hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sororia]9.8e-4177.52Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+LPSIS H L+RHRN TI  HSQFLPL SLKLRKQSFL N +IGKLR     + PVVYAA NNF RVFQTV KVGKDGIEAGT LVP SVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        +ARISVAI AL+IGLFLLKSVLSTA FVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

XP_004152015.1 uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus]8.3e-4075.97Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+ PSIS H L RHRNPTI  HSQ LPL SLKL++QSFL N QI KLR     + P+VYAA NNF RVFQTV K+GKDGIEAGT LVPDSVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        IARISV IVALTIGLFL KSVLSTALFVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

XP_022931135.1 uncharacterized protein LOC111437405 [Cucurbita moschata]5.8e-4177.52Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+LPSIS H L+RHRNPTI  HSQFLPL SLKLRKQ FL N +IGKLR     + PVVYAA NNF RVFQTV KVGKDGIEAGT LVP SVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        +ARISVAI AL+IGLFLLKSVLSTA FVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

XP_022996352.1 uncharacterized protein LOC111491610 [Cucurbita maxima]1.3e-4077.52Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+LPSIS H L+RHRN TI  HSQFLPL SLKLRKQSFL   +IGKLR     + PVVYAA NNF RVFQTV KVGKDGIEAGT LVPDSVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        +ARISVAI AL+IGLFLLKSVLSTA FVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

XP_023532771.1 uncharacterized protein LOC111794841 [Cucurbita pepo subsp. pepo]8.9e-4278.29Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+LPSIS H L+RHRN TI  HSQFLPL SLKLRKQSFLSN +IGKLR     + PVVYAA NNF RVFQTV KVGKDGIEAGT LVP+SVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        +ARISVAI AL+IGLFLLKSVLSTA FVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

TrEMBL top hitse value%identityAlignment
A0A0A0LCA2 Uncharacterized protein4.0e-4075.97Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+ PSIS H L RHRNPTI  HSQ LPL SLKL++QSFL N QI KLR     + P+VYAA NNF RVFQTV K+GKDGIEAGT LVPDSVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        IARISV IVALTIGLFL KSVLSTALFVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

A0A1S3BHT2 uncharacterized protein LOC1034898041.1e-3772.58Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLRAHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRPIARIS
        +SS LFH+ PSIS H L RHRNPTI  HSQFLPL SLKL+KQS +  L+     + P+VYAA NNF RVFQTV K+GKDGIEAGT LVP SVPRPIARIS
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLRAHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRPIARIS

Query:  VAIVALTIGLFLLKSVLSTALFVL
        V IVAL IGLFL KS+LSTALFVL
Subjt:  VAIVALTIGLFLLKSVLSTALFVL

A0A6J1DZ75 uncharacterized protein LOC1110259702.9e-3875.19Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLRAH-----PVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SSSLFH+  SIS H   RHRNP I  HSQFLP  SLKL+KQS  SN QI KL A      P+VYAA NNF RVFQTV K+GKDGIEAGTGLVPDSVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLRAH-----PVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        IARISVAIVA TI LFLLKSVLSTALFVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

A0A6J1ESP6 uncharacterized protein LOC1114374052.8e-4177.52Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+LPSIS H L+RHRNPTI  HSQFLPL SLKLRKQ FL N +IGKLR     + PVVYAA NNF RVFQTV KVGKDGIEAGT LVP SVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        +ARISVAI AL+IGLFLLKSVLSTA FVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

A0A6J1K1P0 uncharacterized protein LOC1114916106.2e-4177.52Show/hide
Query:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP
        +SS LFH+LPSIS H L+RHRN TI  HSQFLPL SLKLRKQSFL   +IGKLR     + PVVYAA NNF RVFQTV KVGKDGIEAGT LVPDSVPRP
Subjt:  SSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLR-----AHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRP

Query:  IARISVAIVALTIGLFLLKSVLSTALFVL
        +ARISVAI AL+IGLFLLKSVLSTA FVL
Subjt:  IARISVAIVALTIGLFLLKSVLSTALFVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13220.1 unknown protein1.6e-1745.31Show/hide
Query:  MASSSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLK-LRKQSFLSNLQIGKLRAHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRPI
        MASS S     L    L  L +  N    +    L LK+   L  ++ ++ LQ  +LR+  +V +A ++F +V +T   +GKDGIEAGT LVP SVPRP+
Subjt:  MASSSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLK-LRKQSFLSNLQIGKLRAHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRPI

Query:  ARISVAIVALTIGLFLLKSVLSTALFVL
        ARISV I AL + LF++KS LSTA FVL
Subjt:  ARISVAIVALTIGLFLLKSVLSTALFVL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGTCTTCTTCGTCTCTATTTCACAGTTTACCTTCAATTTCTCTGCACCTTTTAAAACGCCATAGAAATCCAACCATTTGCACCCATTCCCAGTTCCTTCCTTT
GAAGTCATTGAAGCTCCGAAAACAATCTTTCCTCTCAAATTTACAAATTGGAAAACTAAGAGCTCACCCTGTTGTATATGCTGCTCACAACAATTTCTTCAGAGTCTTTC
AGACAGTTTTGAAGGTTGGCAAGGATGGGATTGAGGCAGGAACAGGCCTGGTACCTGACTCTGTACCAAGGCCAATAGCAAGGATATCTGTTGCAATAGTTGCATTAACT
ATTGGACTCTTTTTGCTCAAGTCAGTCCTGTCTACAGCCTTATTTGTGCTGAATGAAGACCATAAGGGAATGCTACAGCTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGTCTTCTTCGTCTCTATTTCACAGTTTACCTTCAATTTCTCTGCACCTTTTAAAACGCCATAGAAATCCAACCATTTGCACCCATTCCCAGTTCCTTCCTTT
GAAGTCATTGAAGCTCCGAAAACAATCTTTCCTCTCAAATTTACAAATTGGAAAACTAAGAGCTCACCCTGTTGTATATGCTGCTCACAACAATTTCTTCAGAGTCTTTC
AGACAGTTTTGAAGGTTGGCAAGGATGGGATTGAGGCAGGAACAGGCCTGGTACCTGACTCTGTACCAAGGCCAATAGCAAGGATATCTGTTGCAATAGTTGCATTAACT
ATTGGACTCTTTTTGCTCAAGTCAGTCCTGTCTACAGCCTTATTTGTGCTGAATGAAGACCATAAGGGAATGCTACAGCTATAG
Protein sequenceShow/hide protein sequence
MASSSSSLFHSLPSISLHLLKRHRNPTICTHSQFLPLKSLKLRKQSFLSNLQIGKLRAHPVVYAAHNNFFRVFQTVLKVGKDGIEAGTGLVPDSVPRPIARISVAIVALT
IGLFLLKSVLSTALFVLNEDHKGMLQL