CuGenDBv2

Gene ID	Tan0006369
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Genome location	LG03:1187686..1188024
RNA-Seq Expression	Tan0006369
Synteny	Tan0006369
Gene Ontology terms	GO:0006508 - proteolysis (biological process) GO:0015074 - DNA integration (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008234 - cysteine-type peptidase activity (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0044955.1 gag/pol protein [Cucumis melo var. makuwa]

2.7e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

KAA0048404.1 gag/pol protein [Cucumis melo var. makuwa]

2.7e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

KAA0051952.1 gag/pol protein [Cucumis melo var. makuwa]

2.7e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

KAA0054490.1 gag/pol protein [Cucumis melo var. makuwa]

2.7e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

TYK14550.1 gag/pol protein [Cucumis melo var. makuwa]

2.7e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SMH8 Gag/pol protein

1.3e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

A0A5A7TU93 Gag/pol protein

1.3e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

A0A5A7TWB9 Gag/pol protein

1.3e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

A0A5A7V4M1 Gag/pol protein

1.3e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

A0A5D3CPJ6 Gag/pol protein

1.3e-36

74.11

Show/hide

Query:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN
        M+ A+EIM SLQ MFGQ S  + +DALKY+YN+RM EGASVREHVL+MMVHFNVAE+NG VIDE SQV+FI+ESLP+SFL F +NA+MNKI Y LTTLLN
Subjt:  MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLN

Query:  ELQTFESQMKSK
        ELQTFES MK K
Subjt:  ELQTFESQMKSK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGTCATCGCTAAGGAGATCATGGGATCATTACAGGCGATGTTCGGACAACCGTCCTCATCGGTCCATTATGATGCTCTCAAATACGTTTACAACTCCCGTATGAAGGA
GGGAGCCTCTGTTAGGGAACATGTCCTTGACATGATGGTCCACTTCAACGTGGCTGAAGTAAATGGGGTTGTCATAGATGAGAAAAGTCAGGTAACTTTTATTATGGAAT
CTCTTCCGAAGAGTTTCCTGCCATTCTGCACCAATGCGATGATGAATAAAATAGAATATAACCTGACTACTCTCCTCAACGAGCTTCAGACTTTTGAATCCCAGATGAAA
TCAAAATGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MVIAKEIMGSLQAMFGQPSSSVHYDALKYVYNSRMKEGASVREHVLDMMVHFNVAEVNGVVIDEKSQVTFIMESLPKSFLPFCTNAMMNKIEYNLTTLLNELQTFESQMK
SK

Tan0006369 (gene) of Snake gourd v1 genome