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Tan0006380 (gene) of Snake gourd v1 genome

Gene IDTan0006380
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionMic1 domain-containing protein
Genome locationLG08:63572638..63585147
RNA-Seq ExpressionTan0006380
SyntenyTan0006380
Gene Ontology termsGO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR034595 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651130.1 hypothetical protein Csa_002376 [Cucumis sativus]2.5e-2092.86Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNT
        MDRKD+ATASLLKRVL +CASQAKQYGGCVAAKVPKVERDMCLKEF+ALKSCMQNT
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNT

KAG6580793.1 hypothetical protein SDJN03_20795, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2395.08Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS
        MDRKDKATASLLKRVL TCASQAKQYGGCVA+KVPKVERDMCLKEF+ALKSCMQNTLRGKS
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS

PRQ44425.1 hypothetical protein RchiOBHm_Chr3g0479131 [Rosa chinensis]5.8e-1778.95Show/hide
Query:  KDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK
        KDK +AS L+R+L TCA+QA++YGGCVAAKVP+VERDMCLKEF+ALKSCMQN LRGK
Subjt:  KDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK

VVA38545.1 PREDICTED: unnamed [Prunus dulcis]7.5e-1772.13Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS
        +D K++ + S LKR+L TCA+Q K+YGGCVAAKVP+VERDMCLKEF+ALKSCMQN LRGK+
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS

XP_016899714.1 PREDICTED: uncharacterized protein LOC107990619 [Cucumis melo]3.5e-2291.67Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK
        MD+KD+ATASLLKRVL +CASQAKQYGGCVAAKVPKVERDMCLKEF+ALKSCMQNTLRGK
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK

TrEMBL top hitse value%identityAlignment
A0A0A0LB85 Uncharacterized protein5.8e-2393.33Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK
        MDRKD+ATASLLKRVL +CASQAKQYGGCVAAKVPKVERDMCLKEF+ALKSCMQNTLRGK
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK

A0A1S4DUQ7 uncharacterized protein LOC1079906191.7e-2291.67Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK
        MD+KD+ATASLLKRVL +CASQAKQYGGCVAAKVPKVERDMCLKEF+ALKSCMQNTLRGK
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK

A0A2P6RDE1 Uncharacterized protein2.8e-1778.95Show/hide
Query:  KDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK
        KDK +AS L+R+L TCA+QA++YGGCVAAKVP+VERDMCLKEF+ALKSCMQN LRGK
Subjt:  KDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGK

A0A3N7G3J9 Uncharacterized protein1.8e-1672.41Show/hide
Query:  KDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS
        K++ T S L+RVL  CA+QAK+YGGCVAAKVP++ERDMCLKEF+ALK+CMQNT+RGK+
Subjt:  KDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS

A0A5E4GFC7 PREDICTED: unnamed3.6e-1772.13Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS
        +D K++ + S LKR+L TCA+Q K+YGGCVAAKVP+VERDMCLKEF+ALKSCMQN LRGK+
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12012.1 conserved peptide upstream open reading frame 204.2e-1867.21Show/hide
Query:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS
        M  K+  TAS L R+LATC+ QAK YG CVA+KV +VERD+CLKEF+ALKSCMQ+T+RGK+
Subjt:  MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCGGAAGGACAAAGCAACAGCTTCCTTGCTCAAACGTGTTCTAGCTACTTGCGCATCTCAGGCAAAACAATACGGGGGTTGTGTTGCGGCAAAGGTTCCAAAAGT
TGAACGTGATATGTGTTTGAAAGAATTTGTTGCACTAAAGTCTTGCATGCAAAATACGCTTCGGGGGAAATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACCGGAAGGACAAAGCAACAGCTTCCTTGCTCAAACGTGTTCTAGCTACTTGCGCATCTCAGGCAAAACAATACGGGGGTTGTGTTGCGGCAAAGGTTCCAAAAGT
TGAACGTGATATGTGTTTGAAAGAATTTGTTGCACTAAAGTCTTGCATGCAAAATACGCTTCGGGGGAAATCATAA
Protein sequenceShow/hide protein sequence
MDRKDKATASLLKRVLATCASQAKQYGGCVAAKVPKVERDMCLKEFVALKSCMQNTLRGKS