; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006408 (gene) of Snake gourd v1 genome

Gene IDTan0006408
OrganismTrichosanthes anguina (Snake gourd v1)
Description40S ribosomal protein S23-1
Genome locationLG08:6952724..6955072
RNA-Seq ExpressionTan0006408
SyntenyTan0006408
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]1.5e-4693.94Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRR LGFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRK+VR
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]1.1e-4694.95Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]3.9e-4795.96Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]8.7e-4794.95Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRRF GFSDG+LMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]1.2e-4896.97Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRRFLGFSDGE+MRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK+V+
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939379.7e-4489.69Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKI
        MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKI

A0A5D3BBN9 40S ribosomal protein S23-19.7e-4489.69Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKI
        MALRR LGFSDGE+MRSDAKPCSQLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKI

A0A6J1DQC3 uncharacterized protein LOC1110232547.2e-4793.94Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRR LGFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRK+VR
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

A0A6J1FAF1 uncharacterized protein LOC1114438685.5e-4794.95Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

A0A6J1I1J3 uncharacterized protein LOC1114685991.9e-4795.96Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR
        MALRRF GFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein1.3e-4078.12Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.2 unknown protein1.3e-4078.12Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.3 unknown protein1.3e-4078.12Show/hide
Query:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G+LMRSDAKPCS+LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTTAGACGATTCTTAGGTTTTTCAGATGGTGAGCTAATGAGATCAGATGCTAAACCGTGTTCTCAGTTGATGAAACAGACGGCTGGGTTATGTACTGTTGGAGG
AGGACTTGCATTCTGGATTCTCTGTAGATTACATTATGGTCCAAGAATTACAGTTCCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCAACCTCGG
CTTTGCTTGTCCGATTGTTTAGTCCTGAATGTGAACCCCAGAACATTGCTGCTTATGACAAAAGGAAAATTGTAAGGTAA
mRNA sequenceShow/hide mRNA sequence
CTTCTTCACGAATCATTCCAAAGCTCTCTTTCAGTTTCAGCACTCTGTAATTCCAAGGCTCAGATTCTCAGACCCGCGGCGCGGCGCCACCCAAAAGCACCGGCTACGCC
GGCCCGCTGCTGCTGTTCTTTTCCCTTCAAGCAGTTGATCTGTGCTTTTTATCGCCCCCATTTTCTTTCGGAAAATAGCAGATGGCGCTTAGACGATTCTTAGGTTTTTC
AGATGGTGAGCTAATGAGATCAGATGCTAAACCGTGTTCTCAGTTGATGAAACAGACGGCTGGGTTATGTACTGTTGGAGGAGGACTTGCATTCTGGATTCTCTGTAGAT
TACATTATGGTCCAAGAATTACAGTTCCTAGGAGTCTTCGTTGGGCAGCTTGTGGAGCAGCATCAATGAGTGCAACCTCGGCTTTGCTTGTCCGATTGTTTAGTCCTGAA
TGTGAACCCCAGAACATTGCTGCTTATGACAAAAGGAAAATTGTAAGGTAATTGACATTCAGAGAGCAATGATCTTACTGTATCATTAAATGCTGTTATTCAGATATTTC
TTTAATAGGAGCTAACTGATTTAATTAATTTTGGTTTAAGTTATGTTGTTGGTGTTGTTAAGTCCAACAGAAATTATTGGAGAAGGTCGTTACAATGTGATGATTGTTTT
AGATATATGAGAGAGAAATTGTGTATTTTGAATATGTAATCAATAGTTTTTATTAGATAACA
Protein sequenceShow/hide protein sequence
MALRRFLGFSDGELMRSDAKPCSQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAASMSATSALLVRLFSPECEPQNIAAYDKRKIVR