; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006525 (gene) of Snake gourd v1 genome

Gene IDTan0006525
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGlycine-rich RNA-binding protein
Genome locationLG02:34863004..34864289
RNA-Seq ExpressionTan0006525
SyntenyTan0006525
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136860.1 glycine-rich RNA-binding protein RZ1A [Cucumis sativus]7.4e-8482.38Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWST+DRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR---------------GGRYGGRDDKYSGGG---------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPY
        GRDHDRDR RDFGG RGSNSGDCFKCG+               GGRYGGRDDKYSGGG         DRNGDRFGGRNRS+GDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR---------------GGRYGGRDDKYSGGG---------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPY

Query:  GVESSGGFRS
            SGGFRS
Subjt:  GVESSGGFRS

XP_008455237.1 PREDICTED: glycine-rich RNA-binding protein RZ1A [Cucumis melo]5.7e-8482.08Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWST+DRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG------------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRDHDRDR RDFGG RGSNSGDCFKC              GRGGRYGGRDDKY GGG            DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG------------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYGVESSGGFRS
        PY    SGGFRS
Subjt:  PYGVESSGGFRS

XP_022154392.1 glycine-rich RNA-binding protein RZ1A [Momordica charantia]5.1e-8583.57Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG
        MAEEVEYRCFIGGLSWST+DR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG--------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVE
        RDHDRDR+RDFGGGRGSNSGDCFKC              GRGGRYGGRDDKYS GG        DRNGDRFGGRNRS+GDRGGSGSDR++RDRSGPY   
Subjt:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG--------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVE

Query:  SSGGFRS
        SSGGFRS
Subjt:  SSGGFRS

XP_022988948.1 glycine-rich RNA-binding protein RZ1A-like [Cucurbita maxima]7.0e-8282.46Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWST+DRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG----------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYG
        RDHDRDR+RDFGGGRGSNS DCFKC              GRGGRYGGRDDKYSGGG          DRNGDR GGRNR TGDRGGSGSDRYSRDRSGPY 
Subjt:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG----------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYG

Query:  VES--SGGFRS
          S  SGGFRS
Subjt:  VES--SGGFRS

XP_038888155.1 glycine-rich RNA-binding protein RZ1A [Benincasa hispida]9.7e-8482.86Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWST+DRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG----------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPY
        GRDHDRDR RD GG RGSNSGDCFKC              GRGGRYGGRDDKYSGGG          DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG----------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPY

Query:  GVESSGGFRS
            SGGFRS
Subjt:  GVESSGGFRS

TrEMBL top hitse value%identityAlignment
A0A0A0K5W4 Uncharacterized protein3.6e-8482.38Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWST+DRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR---------------GGRYGGRDDKYSGGG---------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPY
        GRDHDRDR RDFGG RGSNSGDCFKCG+               GGRYGGRDDKYSGGG         DRNGDRFGGRNRS+GDRGGSGSDRYSRDRSGPY
Subjt:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR---------------GGRYGGRDDKYSGGG---------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPY

Query:  GVESSGGFRS
            SGGFRS
Subjt:  GVESSGGFRS

A0A1S3C164 glycine-rich RNA-binding protein RZ1A2.8e-8482.08Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-
        MA+EVEYRCFIGGLSWST+DRGLKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRDHDGDRPR 
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPR-

Query:  GRDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG------------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
        GRDHDRDR RDFGG RGSNSGDCFKC              GRGGRYGGRDDKY GGG            DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG
Subjt:  GRDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG------------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSG

Query:  PYGVESSGGFRS
        PY    SGGFRS
Subjt:  PYGVESSGGFRS

A0A6J1DLZ2 glycine-rich RNA-binding protein RZ1A2.5e-8583.57Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG
        MAEEVEYRCFIGGLSWST+DR LKEAFEKFGHL+EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGR+ITVDKAQPNQGSGRDHDGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG--------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVE
        RDHDRDR+RDFGGGRGSNSGDCFKC              GRGGRYGGRDDKYS GG        DRNGDRFGGRNRS+GDRGGSGSDR++RDRSGPY   
Subjt:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG--------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVE

Query:  SSGGFRS
        SSGGFRS
Subjt:  SSGGFRS

A0A6J1EI50 glycine-rich RNA-binding protein RZ1A-like4.9e-8181.9Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWST+DRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG---------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGV
        RD++RDR+RDFGGGRGSNS DCFKC              GRGGRYGGRDDKYSGGG         DRNGDR GGRNR TGDRGGSGSDRYSRDRSGPY  
Subjt:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG---------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGV

Query:  ES--SGGFRS
         S  SGGFRS
Subjt:  ES--SGGFRS

A0A6J1JNT9 glycine-rich RNA-binding protein RZ1A-like3.4e-8282.46Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG
        MAEE EYRCFIGGLSWST+DRGLKEAFEKFGHL EAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRD+DGDRPRG
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRG

Query:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG----------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYG
        RDHDRDR+RDFGGGRGSNS DCFKC              GRGGRYGGRDDKYSGGG          DRNGDR GGRNR TGDRGGSGSDRYSRDRSGPY 
Subjt:  RDHDRDRSRDFGGGRGSNSGDCFKC--------------GRGGRYGGRDDKYSGGG----------DRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYG

Query:  VES--SGGFRS
          S  SGGFRS
Subjt:  VES--SGGFRS

SwissProt top hitse value%identityAlignment
P49310 Glycine-rich RNA-binding protein GRP1A1.3e-2742.86Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G ++++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG DLDGR+ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGG---RNRSTGDRGGSGSDRYSRDRSGPYGVESSGG
                GGG G   G  ++ G GG YGG    Y GGG   G   GG    +R  G  G  G  R      G YG    GG
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGG---RNRSTGDRGGSGSDRYSRDRSGPYGVESSGG

Q03250 Glycine-rich RNA-binding protein 71.1e-2642.39Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G +I++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDR--NGDRFGGRNRSTGDRGGSGSDRYS--RDRSGPYGVESSGGF
                GGG     G  ++ G GG Y G    Y GGG R   G  + G       RGG G       R+  G YG    GG+
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDR--NGDRFGGRNRSTGDRGGSGSDRYS--RDRSGPYGVESSGGF

Q03251 Glycine-rich RNA-binding protein 81.9e-2644.44Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        EVEYRCF+GGL+W+T D  L+  F +FG +I++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVESSGGF
                GGGRG + G     G GG  GG    YSGGG    +R  G   S G  GG G     R   G YG    G +
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVESSGGF

Q03878 Glycine-rich RNA-binding protein7.3e-2642.46Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        EVEYRCF+GGL+W+T D  L++AF +FG + ++K++ D+ +GRSRGFGFVTF ++K+M +AI+ MNG +LDGR ITV++AQ                   
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVESSGG
            SR  GGG G   G     G GG YGGR +   GGG      +GGR    G   G G   Y   R G  G    GG
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVESSGG

Q9LIN3 Glycine-rich RNA-binding protein RZ1A6.0e-5260.39Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDHDGDRPR
        M+E+ EYRCFIGGL+W+T+DRGL++AFEK+GHL+EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR----------------GGRYGGRDDKYSGGGDRNG---DRFGGRNRSTG---DRGGSGSDRYSRDRSGPYGV
         R +DRDRSR   GGRG   GDCFKCG+                GGR+  +DD+YS   DR G   DR+G +    G   DR  S  DRYS  +   YG 
Subjt:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR----------------GGRYGGRDDKYSGGGDRNG---DRFGGRNRSTG---DRGGSGSDRYSRDRSGPYGV

Query:  ESSGGFR
           GG R
Subjt:  ESSGGFR

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 28.1e-2842.39Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G +I++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDR--NGDRFGGRNRSTGDRGGSGSDRYS--RDRSGPYGVESSGGF
                GGG     G  ++ G GG Y G    Y GGG R   G  + G       RGG G       R+  G YG    GG+
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDR--NGDRFGGRNRSTGDRGGSGSDRYS--RDRSGPYGVESSGGF

AT2G21660.2 cold, circadian rhythm, and rna binding 28.9e-2744.2Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        +VEYRCF+GGL+W+T DR L+ AF ++G +I++K++ D+ +GRSRGFGFVTF ++KAM +AI+ MNG DLDGR+ITV++AQ                   
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDR--GGSGSDRYSRDRSGPYGVESSGG
            SR  GGG G   G  +  G G R GG    YSGGG     R GG     G R  GG G   Y     G YG    GG
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDR--GGSGSDRYSRDRSGPYGVESSGG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain4.2e-5360.39Show/hide
Query:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDHDGDRPR
        M+E+ EYRCFIGGL+W+T+DRGL++AFEK+GHL+EAKVV+DKFSGRSRGFGF+TFDEKKAMDEAI AMNGMDLDGR ITVDKAQP+Q G+GRD+DGDR R
Subjt:  MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQ-GSGRDHDGDRPR

Query:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR----------------GGRYGGRDDKYSGGGDRNG---DRFGGRNRSTG---DRGGSGSDRYSRDRSGPYGV
         R +DRDRSR   GGRG   GDCFKCG+                GGR+  +DD+YS   DR G   DR+G +    G   DR  S  DRYS  +   YG 
Subjt:  GRDHDRDRSRDFGGGRGSNSGDCFKCGR----------------GGRYGGRDDKYSGGGDRNG---DRFGGRNRSTG---DRGGSGSDRYSRDRSGPYGV

Query:  ESSGGFR
           GG R
Subjt:  ESSGGFR

AT4G39260.1 cold, circadian rhythm, and RNA binding 11.4e-2744.44Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        EVEYRCF+GGL+W+T D  L+  F +FG +I++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVESSGGF
                GGGRG + G     G GG  GG    YSGGG    +R  G   S G  GG G     R   G YG    G +
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVESSGGF

AT4G39260.2 cold, circadian rhythm, and RNA binding 18.9e-2748.25Show/hide
Query:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH
        EVEYRCF+GGL+W+T D  L+  F +FG +I++K++ D+ SGRSRGFGFVTF ++KAM +AI+ MNG +LDGR ITV++AQ ++GSG             
Subjt:  EVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDH

Query:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNG
                GGGRG + G     G GG  GG    YSGGG   G
Subjt:  DRDRSRDFGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGAAGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACTACTGACAGAGGTCTGAAAGAAGCGTTTGAAAAGTTTGGCCATCTTATCGAGGCCAA
GGTAGTTGTTGACAAGTTTTCTGGACGTTCCCGTGGTTTTGGCTTTGTTACATTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCCATGAATGGAATGGATTTGG
ATGGCCGGGCTATTACAGTTGACAAGGCTCAGCCAAACCAAGGTTCAGGTAGAGATCATGATGGTGATCGCCCACGTGGTCGTGATCATGATCGTGATCGTAGTCGAGAT
TTCGGTGGTGGACGTGGATCTAACAGTGGAGATTGCTTTAAATGTGGTAGAGGAGGTAGGTATGGTGGCAGGGATGACAAATATAGTGGTGGTGGTGATCGAAATGGAGA
TAGATTTGGTGGGCGCAATAGGAGTACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATACAGTCGAGATCGCTCTGGGCCATATGGCGTCGAGAGTTCTGGTGGTTTTC
GTTCTTGA
mRNA sequenceShow/hide mRNA sequence
GAAATTGCTAGCTCAATTCTGCTGCTTAATTGTCGTATTTTGATTCTTCGGATCGAAAAAGTTTCTGAGTATTTTCTTCTGGTTTAAATCCGTTCGATTTCAACGAGTTA
ATTGCGGCTTTTTTAATGTTGGATTTGCTCGAATTCTTCACCCCTCTTCTAACTTCGGGAAATTAAATTGATTTGACTGCGGTTCTTCGATCTAGTTCGCATAATGGCTG
AAGAGGTGGAGTATCGCTGCTTTATTGGCGGCCTTTCTTGGTCAACTACTGACAGAGGTCTGAAAGAAGCGTTTGAAAAGTTTGGCCATCTTATCGAGGCCAAGGTAGTT
GTTGACAAGTTTTCTGGACGTTCCCGTGGTTTTGGCTTTGTTACATTTGATGAGAAAAAAGCTATGGATGAGGCAATCAAAGCCATGAATGGAATGGATTTGGATGGCCG
GGCTATTACAGTTGACAAGGCTCAGCCAAACCAAGGTTCAGGTAGAGATCATGATGGTGATCGCCCACGTGGTCGTGATCATGATCGTGATCGTAGTCGAGATTTCGGTG
GTGGACGTGGATCTAACAGTGGAGATTGCTTTAAATGTGGTAGAGGAGGTAGGTATGGTGGCAGGGATGACAAATATAGTGGTGGTGGTGATCGAAATGGAGATAGATTT
GGTGGGCGCAATAGGAGTACTGGTGATCGAGGAGGTTCGGGAAGTGATCGATACAGTCGAGATCGCTCTGGGCCATATGGCGTCGAGAGTTCTGGTGGTTTTCGTTCTTG
A
Protein sequenceShow/hide protein sequence
MAEEVEYRCFIGGLSWSTTDRGLKEAFEKFGHLIEAKVVVDKFSGRSRGFGFVTFDEKKAMDEAIKAMNGMDLDGRAITVDKAQPNQGSGRDHDGDRPRGRDHDRDRSRD
FGGGRGSNSGDCFKCGRGGRYGGRDDKYSGGGDRNGDRFGGRNRSTGDRGGSGSDRYSRDRSGPYGVESSGGFRS