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Tan0006530 (gene) of Snake gourd v1 genome

Gene IDTan0006530
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptioncyclin-dependent protein kinase inhibitor SMR3-like
Genome locationLG01:31324200..31324809
RNA-Seq ExpressionTan0006530
SyntenyTan0006530
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8039043.1 hypothetical protein FH972_011491 [Carpinus fangiana]3.3e-2248.32Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEG--EVVKDGS----------------------KTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK
        MG+ +S + LSE D+NAMEF FL+      +ED G  EVVK                         + +EDD++GFKTPTSL+HKIP  L+CP APRKPK
Subjt:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEG--EVVKDGS----------------------KTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK

Query:  SRPSTKRKAAERQRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQETNK
        + P TKRKAA RQR+LLDLS++I++LFP   L  L  GKIK++R+E ++
Subjt:  SRPSTKRKAAERQRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQETNK

KAG6607237.1 hypothetical protein SDJN03_00579, partial [Cucurbita argyrosperma subsp. sororia]6.6e-3979.65Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKDGSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLDLSSEIQ
        M LFNS+ILLSENDV+AMEFTFLL Y+ SK +D    +   SK++EDDDNGFKTPTSLEHKIP SLRCPMAPRKPKSRP  KRKA ERQRL LDLSSEIQ
Subjt:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKDGSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLDLSSEIQ

Query:  SLFPADFLVGLGG
        SLFPADFLVGLGG
Subjt:  SLFPADFLVGLGG

KAG7036922.1 hypothetical protein SDJN02_00542, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-4077.97Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKDGSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLDLSSEIQ
        M LFNS+ILLSENDV+AMEFTFLL Y+ SK +D    +   SK+++DDDNGFKTPTSLEHKIP SLRCPMAPRKPKSRP  KRKA ERQRL LDLSSEIQ
Subjt:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKDGSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLDLSSEIQ

Query:  SLFPADFLVGLGGKIKRV
        SLFPADFLVGLGGK+KR+
Subjt:  SLFPADFLVGLGGKIKRV

XP_011658114.1 cyclin-dependent protein kinase inhibitor SMR3 [Cucumis sativus]3.1e-4480.16Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLD
        MGLFNSSILLSENDVN+MEFTFLLRYVNSKE+D+ E  ++       S ++EDDDNGFKTPTSLEHKIPTSL+CPMAPRKPK R  TKRKA ER RLLLD
Subjt:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLD

Query:  LSSEIQSLFPADFLVGLGGKIKRVRQ
        LSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LSSEIQSLFPADFLVGLGGKIKRVRQ

XP_016902107.1 PREDICTED: cyclin-dependent protein kinase inhibitor SMR3-like [Cucumis melo]6.4e-4276.56Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLL
        MGL  FNSSILLSENDVN+MEFTFLLRYVNSKE+D+ E  ++       +  ++DDDNGFKTPTSLEHKIPTS++CPMAPRKPK R  TKRKA ER RLL
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLL

Query:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ
        LDLSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ

TrEMBL top hitse value%identityAlignment
A0A0A0LY05 Uncharacterized protein1.5e-4480.16Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLD
        MGLFNSSILLSENDVN+MEFTFLLRYVNSKE+D+ E  ++       S ++EDDDNGFKTPTSLEHKIPTSL+CPMAPRKPK R  TKRKA ER RLLLD
Subjt:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLD

Query:  LSSEIQSLFPADFLVGLGGKIKRVRQ
        LSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LSSEIQSLFPADFLVGLGGKIKRVRQ

A0A1S4E1K5 cyclin-dependent protein kinase inhibitor SMR3-like3.1e-4276.56Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLL
        MGL  FNSSILLSENDVN+MEFTFLLRYVNSKE+D+ E  ++       +  ++DDDNGFKTPTSLEHKIPTS++CPMAPRKPK R  TKRKA ER RLL
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLL

Query:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ
        LDLSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ

A0A5A7VIY0 Cyclin-dependent protein kinase inhibitor SMR3-like3.1e-4276.56Show/hide
Query:  MGL--FNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLL
        MGL  FNSSILLSENDVN+MEFTFLLRYVNSKE+D+ E  ++       +  ++DDDNGFKTPTSLEHKIPTS++CPMAPRKPK R  TKRKA ER RLL
Subjt:  MGL--FNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKD------GSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLL

Query:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ
        LDLSSEIQSLFPA+FLVGLGGKIKRVRQ
Subjt:  LDLSSEIQSLFPADFLVGLGGKIKRVRQ

A0A660KRH4 Uncharacterized protein1.6e-2248.32Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEG--EVVKDGS----------------------KTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK
        MG+ +S + LSE D+NAMEF FL+      +ED G  EVVK                         + +EDD++GFKTPTSL+HKIP  L+CP APRKPK
Subjt:  MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEG--EVVKDGS----------------------KTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPK

Query:  SRPSTKRKAAERQRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQETNK
        + P TKRKAA RQR+LLDLS++I++LFP   L  L  GKIK++R+E ++
Subjt:  SRPSTKRKAAERQRLLLDLSSEIQSLFPADFLVGLG-GKIKRVRQETNK

B9T5R7 Uncharacterized protein8.7e-2144.38Show/hide
Query:  MGLFNSSILLSENDVNAMEFTFLLRYV-------------------NSKEEDEGEVV----KDGSKTL-----------------------EDDDNGFKT
        MG+ NS +LLSE D+++MEF FL+R                     +  EEDE E V    +D  K L                       +D D+G KT
Subjt:  MGLFNSSILLSENDVNAMEFTFLLRYV-------------------NSKEEDEGEVV----KDGSKTL-----------------------EDDDNGFKT

Query:  PTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLDLSSEIQSLFPADFLVGLGGKIKRVRQETN
        PTSL HKIPT L CP APRKPKS PS KRK+  R+R+LLDLS+EI+SLFP      LG KIK+VRQE +
Subjt:  PTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLDLSSEIQSLFPADFLVGLGGKIKRVRQETN

SwissProt top hitse value%identityAlignment
Q9LTJ2 Cyclin-dependent protein kinase inhibitor SMR141.4e-0431.96Show/hide
Query:  KEEDEGEVVKDGSK-----TLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKA--AERQRLLLDLSSEIQSLFPADFLVGLGGKIKRVR
        +++ E E ++DGS+       +D+++  K P +  +        P  PRKPK+ PS KR+    +R  + LD++ E++S+FP   L   G KIK+ R
Subjt:  KEEDEGEVVKDGSK-----TLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKA--AERQRLLLDLSSEIQSLFPADFLVGLGGKIKRVR

Arabidopsis top hitse value%identityAlignment
AT5G02420.1 unknown protein8.7e-0541.46Show/hide
Query:  DDDNGFKTPTSLEHKIP--TSLRCPMAPRKPKSRPS--TKRKAAE---RQRLLLDLSSEIQSLFPADFLVGLGGKIKRVRQE
        +++ G KTPTS +HKIP      CP APRKPK   S  TKRK        R+ +DLS EI+  F       L  +IK+ R++
Subjt:  DDDNGFKTPTSLEHKIP--TSLRCPMAPRKPKSRPS--TKRKAAE---RQRLLLDLSSEIQSLFPADFLVGLGGKIKRVRQE

AT5G59360.1 unknown protein1.0e-0531.96Show/hide
Query:  KEEDEGEVVKDGSK-----TLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKA--AERQRLLLDLSSEIQSLFPADFLVGLGGKIKRVR
        +++ E E ++DGS+       +D+++  K P +  +        P  PRKPK+ PS KR+    +R  + LD++ E++S+FP   L   G KIK+ R
Subjt:  KEEDEGEVVKDGSK-----TLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKA--AERQRLLLDLSSEIQSLFPADFLVGLGGKIKRVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCTTCAATTCTAGTATTTTACTCTCTGAAAATGATGTAAACGCCATGGAATTCACTTTTCTTCTGCGATATGTAAATTCCAAAGAAGAAGATGAAGGAGAAGT
AGTGAAAGATGGAAGCAAAACACTTGAAGATGATGACAATGGGTTCAAAACTCCGACATCTTTGGAGCATAAAATTCCCACAAGTCTCCGGTGTCCGATGGCGCCGAGGA
AACCGAAATCTCGGCCGTCGACGAAGCGGAAGGCGGCGGAGCGACAGCGTCTGTTGCTGGATCTGTCCAGTGAGATTCAGTCTTTGTTTCCAGCTGATTTTCTTGTAGGC
CTCGGTGGTAAGATCAAGAGGGTTAGACAAGAAACAAACAAAAACCCACATCCATAA
mRNA sequenceShow/hide mRNA sequence
CCATGCACGTATTTTGATTTGATGGGTCTCTTCAATTCTAGTATTTTACTCTCTGAAAATGATGTAAACGCCATGGAATTCACTTTTCTTCTGCGATATGTAAATTCCAA
AGAAGAAGATGAAGGAGAAGTAGTGAAAGATGGAAGCAAAACACTTGAAGATGATGACAATGGGTTCAAAACTCCGACATCTTTGGAGCATAAAATTCCCACAAGTCTCC
GGTGTCCGATGGCGCCGAGGAAACCGAAATCTCGGCCGTCGACGAAGCGGAAGGCGGCGGAGCGACAGCGTCTGTTGCTGGATCTGTCCAGTGAGATTCAGTCTTTGTTT
CCAGCTGATTTTCTTGTAGGCCTCGGTGGTAAGATCAAGAGGGTTAGACAAGAAACAAACAAAAACCCACATCCATAACCTACTATTATAAATGTACTACTGGTTTTTTT
TTTTTTCTCCTTTGATTTTAGTTGTTAAAATTGATCTTGTAGAAATATGGGGTTTCTCTGTTTAGATATGATCTCTCCTCCGGCCGTCTTCTCCGGTGGCGGCGGCAAGG
TGCAACTTGTTAGCTTAAAAGCTGAATTTTAACATAATATATCATAACAAAGTTTATGAA
Protein sequenceShow/hide protein sequence
MGLFNSSILLSENDVNAMEFTFLLRYVNSKEEDEGEVVKDGSKTLEDDDNGFKTPTSLEHKIPTSLRCPMAPRKPKSRPSTKRKAAERQRLLLDLSSEIQSLFPADFLVG
LGGKIKRVRQETNKNPHP