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Tan0006553 (gene) of Snake gourd v1 genome

Gene IDTan0006553
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionVQ domain-containing protein
Genome locationLG01:9013087..9013628
RNA-Seq ExpressionTan0006553
SyntenyTan0006553
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577059.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2489.86Show/hide
Query:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID
        A+STRVVIIDTKYV TDAKSFKTVVQKLTGKDPVAEENRH  G R+S LLRDSSFKEFQRVLREMPRID
Subjt:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID

KAG6600481.1 VQ motif-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2585.53Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR
        MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP AEENR TGGG SSGL + DSSFK+FQ  LREMP I R
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR

XP_022942030.1 VQ motif-containing protein 1 [Cucurbita moschata]7.8e-2482.89Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR
        MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP  EENR T GG SSGL + DSSFK+FQ  LREMP I R
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR

XP_023543644.1 VQ motif-containing protein 1 [Cucurbita pepo subsp. pepo]6.6e-2381.58Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR
        MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP AEE R TG G SS L + DSSFK+FQ  LREMP I R
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR

XP_038889427.1 VQ motif-containing protein 1-like [Benincasa hispida]7.1e-2592.86Show/hide
Query:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVA-EENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID
        AHSTRVVIIDTKYV TDAKSFKTVVQKLTGKD VA EENRHTGG R+SGLLRDSSFKEFQRVLREMPRID
Subjt:  AHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVA-EENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID

TrEMBL top hitse value%identityAlignment
A0A0A0KXJ0 VQ domain-containing protein1.9e-2080.56Show/hide
Query:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVA----EENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID
        HSTRVVIIDTKYV TDAKSFKTVVQKLTGKD V     E  R TG  R+S LLRDSSFKEFQRVLREMPRID
Subjt:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVA----EENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID

A0A0L9UJH2 VQ domain-containing protein5.7e-1263.38Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----PVAEENRH-TGGGRSSGLLRDSSFKEFQRVLREMPRID
        +VVII+T+YV TDA SFK+VVQKLTGKD     P A+ NRH  GG   S L+RD SFKEF R+LREMP I+
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----PVAEENRH-TGGGRSSGLLRDSSFKEFQRVLREMPRID

A0A5A7VBD1 VQ motif-containing protein 1-like3.3e-2080.56Show/hide
Query:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVA----EENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID
        HSTRVVIIDTKYV TDAKSFKTVVQKLTGKD V     E  R TG  R+S LLRDSSFKEFQRVLREMPRID
Subjt:  HSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVA----EENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID

A0A6J1CNV7 VQ motif-containing protein 10-like3.0e-2180.26Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP--VAEENRHTGGG--RSSGLLRDSSFKEFQRVLREMPR
        M+GGEA STRVVIIDTKYVHTDAKSFKTVVQKLTGKDP   AEE+R +GGG   SS L RDSSFKEFQRVLREM +
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP--VAEENRHTGGG--RSSGLLRDSSFKEFQRVLREMPR

A0A6J1FVF7 VQ motif-containing protein 13.8e-2482.89Show/hide
Query:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR
        MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDP  EENR T GG SSGL + DSSFK+FQ  LREMP I R
Subjt:  MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGL-LRDSSFKEFQRVLREMPRIDR

SwissProt top hitse value%identityAlignment
Q1G3U8 VQ motif-containing protein 11.0e-0536.78Show/hide
Query:  SGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGLLRDSSFK---------------EFQRVLREMPRI
        +G  +   +VV I+T+YV TDA+SFKT+VQ+LTGK+ V  +  +   G+  G  +DSS +               EF    REMP +
Subjt:  SGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGLLRDSSFK---------------EFQRVLREMPRI

Q8VYI5 VQ motif-containing protein 101.7e-0536.36Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----------------------PVAEENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID
        +VV I+T+YV TDA+SFKTVVQ+LTGK+                        + E+ R   GG   G  R  +  EF R+ +EMP ++
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----------------------PVAEENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID

Arabidopsis top hitse value%identityAlignment
AT1G17147.1 VQ motif-containing protein7.1e-0736.78Show/hide
Query:  SGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGLLRDSSFK---------------EFQRVLREMPRI
        +G  +   +VV I+T+YV TDA+SFKT+VQ+LTGK+ V  +  +   G+  G  +DSS +               EF    REMP +
Subjt:  SGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGLLRDSSFK---------------EFQRVLREMPRI

AT1G78410.1 VQ motif-containing protein1.2e-0636.36Show/hide
Query:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----------------------PVAEENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID
        +VV I+T+YV TDA+SFKTVVQ+LTGK+                        + E+ R   GG   G  R  +  EF R+ +EMP ++
Subjt:  RVVIIDTKYVHTDAKSFKTVVQKLTGKD-----------------------PVAEENRHTGGGRSSGLLRDSSFKEFQRVLREMPRID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGTGGAGAAGCTCATTCTACTAGGGTTGTGATTATTGACACCAAGTATGTCCACACCGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACCGGGAAAGA
TCCGGTGGCGGAGGAGAACCGACATACCGGTGGCGGTCGGAGCTCGGGTCTTTTGAGAGATTCGTCGTTCAAGGAGTTTCAAAGAGTGCTGCGAGAGATGCCAAGAATTG
ATCGATGA
mRNA sequenceShow/hide mRNA sequence
AAAAACCCTTCATCCCTTTCATTAAAACCCCAAAACCCATCAAAACCCACTTCTCAAAATTCCTCCTTTTTGCTTCTATTTTCTTCTCAACTCAAAAAGCTCTCCATTTC
TCCATTGATGTCAGGTGGAGAAGCTCATTCTACTAGGGTTGTGATTATTGACACCAAGTATGTCCACACCGATGCCAAGAGCTTCAAGACGGTGGTGCAGAAGCTGACCG
GGAAAGATCCGGTGGCGGAGGAGAACCGACATACCGGTGGCGGTCGGAGCTCGGGTCTTTTGAGAGATTCGTCGTTCAAGGAGTTTCAAAGAGTGCTGCGAGAGATGCCA
AGAATTGATCGATGAGGTTTAATGGATATATATAGAGAGAGAGAGAGAAAGATATAATCTATTTTGATGATGTTTGTTTACTTAGGATTATTTGTTGTACTTTATTGATA
TTTAATTCTTTTATTAATTTTCGTTTCTTTTTTTTTTTACCCTTGTTTTTGTTTGTTTATATGTGTATATGTGATCAATAAATTTTCATTGTTTAATTTATA
Protein sequenceShow/hide protein sequence
MSGGEAHSTRVVIIDTKYVHTDAKSFKTVVQKLTGKDPVAEENRHTGGGRSSGLLRDSSFKEFQRVLREMPRIDR