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Tan0006559 (gene) of Snake gourd v1 genome

Gene IDTan0006559
OrganismTrichosanthes anguina (Snake gourd v1)
Description30S ribosomal protein S31, mitochondrial
Genome locationLG02:7088400..7089171
RNA-Seq ExpressionTan0006559
SyntenyTan0006559
Gene Ontology termsGO:0032544 - plastid translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009536 - plastid (cellular component)
InterPro domainsIPR030826 - 30S ribosomal protein
IPR044695 - 30S ribosomal protein S31, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572068.1 30S ribosomal protein S31, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.5e-3794.19Show/hide
Query:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+RVMAAER SPSLTSSMAVEGL PILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022933003.1 30S ribosomal protein S31, mitochondrial [Cucurbita moschata]3.5e-3997.73Show/hide
Query:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVAR VMAAERRSPSLTSSMAVEGL PILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022952601.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita moschata]8.5e-3895.35Show/hide
Query:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+RVMAAERRSPSLTSSMAVEGL PILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022969451.1 30S ribosomal protein S31, mitochondrial-like [Cucurbita maxima]5.5e-3794.19Show/hide
Query:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+RVMAAERRSPS TSSMAVEGL PILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

XP_022971575.1 30S ribosomal protein S31, mitochondrial [Cucurbita maxima]3.2e-3795.35Show/hide
Query:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MMQWCGAVAR VMAAERRSPSLTSSMAVEGL PILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDK EVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

TrEMBL top hitse value%identityAlignment
A0A6J1C4C8 30S ribosomal protein S31, mitochondrial6.0e-3792.05Show/hide
Query:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVARRVMA ERR+PSLTS MA E L PILCGRGDKKTKKGK FKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1F3E9 30S ribosomal protein S31, mitochondrial1.7e-3997.73Show/hide
Query:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MAMMQWCGAVAR VMAAERRSPSLTSSMAVEGL PILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1GKP4 30S ribosomal protein S31, mitochondrial-like4.1e-3895.35Show/hide
Query:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+RVMAAERRSPSLTSSMAVEGL PILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1HXU3 30S ribosomal protein S31, mitochondrial-like2.7e-3794.19Show/hide
Query:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        M QWCGA+A+RVMAAERRSPS TSSMAVEGL PILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

A0A6J1I644 30S ribosomal protein S31, mitochondrial1.6e-3795.35Show/hide
Query:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MMQWCGAVAR VMAAERRSPSLTSSMAVEGL PILCGRGDKKTKKGKIFKGSYGN+RPKKEKKIQRIKDK EVPSSTPWPLPFKLI
Subjt:  MMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

SwissProt top hitse value%identityAlignment
O80439 30S ribosomal protein S31, chloroplastic3.8e-0441.82Show/hide
Query:  SSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        S+ +   +  + CGRGD+KT KGK F  S+GNARP+ + K  R  +++ VP + P
Subjt:  SSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP

P47909 30S ribosomal protein S31, mitochondrial4.9e-2062.65Show/hide
Query:  VARRVMAA----ERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        +A R+ AA     R  P+    ++ E  A + CGRGDKKTK+GK FKGSYGNARPK+EKKI+RIKD++EVP STPWPLPFKLI
Subjt:  VARRVMAA----ERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

P47910 30S ribosomal protein S31, chloroplastic7.6e-0554.55Show/hide
Query:  SLTSSMAVEGLAPIL-CGRGDKKTKKGKIFKGSYGNARPKKEKK
        SL+SS++     P++ CGRGD+KT KGK F  S+GNARPK + K
Subjt:  SLTSSMAVEGLAPIL-CGRGDKKTKKGKIFKGSYGNARPKKEKK

Q9SJU8 30S ribosomal protein S31, mitochondrial6.0e-2661.22Show/hide
Query:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA MQWCGA+ RR+M  +R S +L  S     L+P           LCGRGDKKTKKGK FKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

Arabidopsis top hitse value%identityAlignment
AT2G21290.1 unknown protein4.2e-2761.22Show/hide
Query:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI
        MA MQWCGA+ RR+M  +R S +L  S     L+P           LCGRGDKKTKKGK FKGSYGN+R KK+K I+RIKDK+E+P STPWPLPFKLI
Subjt:  MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPI----------LCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI

AT2G38140.1 plastid-specific ribosomal protein 42.7e-0541.82Show/hide
Query:  SSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP
        S+ +   +  + CGRGD+KT KGK F  S+GNARP+ + K  R  +++ VP + P
Subjt:  SSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGATGCAGTGGTGCGGCGCTGTAGCTAGGCGAGTGATGGCGGCGGAGCGCCGGTCTCCTTCACTGACATCGTCAATGGCGGTGGAAGGACTGGCGCCGATCCT
TTGTGGACGAGGTGACAAGAAGACGAAGAAGGGGAAAATATTCAAAGGCTCGTACGGCAACGCCAGGCCGAAGAAGGAGAAGAAGATACAACGAATCAAGGATAAAATCG
AGGTTCCTAGTTCCACTCCATGGCCTCTTCCTTTCAAGCTCATCTGA
mRNA sequenceShow/hide mRNA sequence
CTACAATAAAAAGTTGGGCTAACTTTTTATGGGTTCCTCAATAGCCCAGCCCACATTTCCCGATACACTCGCCTAGTCACTCTTTTGCCTCTTCCATTATTGTTGGGCTC
CAAACGAATCTTGCAATAGAAAAAAAAAATGGCGATGATGCAGTGGTGCGGCGCTGTAGCTAGGCGAGTGATGGCGGCGGAGCGCCGGTCTCCTTCACTGACATCGTCAA
TGGCGGTGGAAGGACTGGCGCCGATCCTTTGTGGACGAGGTGACAAGAAGACGAAGAAGGGGAAAATATTCAAAGGCTCGTACGGCAACGCCAGGCCGAAGAAGGAGAAG
AAGATACAACGAATCAAGGATAAAATCGAGGTTCCTAGTTCCACTCCATGGCCTCTTCCTTTCAAGCTCATCTGATTTTAATTCTTTTTTTTTTTCTGTTGCATCTGGTT
TCATAAACTTTCATGATTTGTAATTTTAAAAAATCAAGGCGTTTCTCGAGGTTTAGGGTTTATGTCAAGTCAAGATCGATTGTACCGAAATTTGAAATGATCTAGAATGA
TTAATCGTTTTGCTGGTGTGTACGATTTCATTTTTTTAGATCTGGAATTGAAATTTGGCTCAGATTCATATCCTTCGAATGATATCTGGAAAATTTTCGAGATTATTTTG
GGAGGAAAATGGATTTTTGTAGATCAGTCTAAAATTTTCATATGCAAGTGTGTTACAGTCTTCAACATGTTGCAATTTATCGCGATGGATTTCATTAGAGATTTTTTTTT
TT
Protein sequenceShow/hide protein sequence
MAMMQWCGAVARRVMAAERRSPSLTSSMAVEGLAPILCGRGDKKTKKGKIFKGSYGNARPKKEKKIQRIKDKIEVPSSTPWPLPFKLI