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Tan0006563 (gene) of Snake gourd v1 genome

Gene IDTan0006563
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionROTUNDIFOLIA like 6
Genome locationLG01:28320907..28321125
RNA-Seq ExpressionTan0006563
SyntenyTan0006563
Gene Ontology termsGO:0008285 - negative regulation of cell population proliferation (biological process)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR012552 - DVL


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK28375.1 unknown, partial [Arabidopsis thaliana]3.1e-0958.06Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

NP_001078498.1 ROTUNDIFOLIA like 6 [Arabidopsis thaliana]3.1e-0958.06Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

XP_002869061.1 uncharacterized protein LOC9303128 [Arabidopsis lyrata subsp. lyrata]6.8e-0959.68Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ES E +K GC+ M+KER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

XP_018470844.1 PREDICTED: uncharacterized protein LOC108842433 [Raphanus sativus]6.8e-0956.25Show/hide
Query:  MGQCQS-------RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S       RK N  EE   ESS     GC+ M+ ER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-------RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

XP_033136252.1 uncharacterized protein LOC103873664 [Brassica rapa]5.2e-0958.06Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ESS     GC+ M+ ER+SRFYIARRC++ML+CWHKYGNS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

TrEMBL top hitse value%identityAlignment
A0A061DFK8 ROTUNDIFOLIA like 6, putative7.3e-0956.25Show/hide
Query:  MGQCQSR-KGNGTE-------EMESSEPHKF-GCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC SR    G E        + SSE  +  GC+ M+KER+SRFYIARRCL+ML+CWHKYG S
Subjt:  MGQCQSR-KGNGTE-------EMESSEPHKF-GCMEMIKERKSRFYIARRCLIMLICWHKYGNS

A0A178V547 RTFL61.5e-0958.06Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

A0A3P6EM47 Uncharacterized protein9.6e-0950.82Show/hide
Query:  MGQCQS------RKGNGTEEMESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S      ++  G E    S     GC+ M+KE++SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS------RKGNGTEEMESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

A0A6J0MFF9 uncharacterized protein LOC1088424333.3e-0956.25Show/hide
Query:  MGQCQS-------RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S       RK N  EE   ESS     GC+ M+ ER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-------RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

D7MC40 Uncharacterized protein3.3e-0959.68Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ES E +K GC+ M+KER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

SwissProt top hitse value%identityAlignment
Q6IM84 Small polypeptide DEVIL 174.0e-1258.06Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

Q6IM86 Small polypeptide DEVIL 154.7e-0560.71Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C ++ KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY

Q6IM93 Small polypeptide DEVIL 81.8e-0451.61Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKYGNS
        C  ++KE+++RFYI RRC++MLICW  + N+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKYGNS

Q8L7D0 Small polypeptide DEVIL 132.1e-0564.29Show/hide
Query:  MIKERKSRFYIARRCLIMLICWHKYGNS
        + KE+K+RFYI RRC+ ML+CWHK+G+S
Subjt:  MIKERKSRFYIARRCLIMLICWHKYGNS

Q8LE84 Small polypeptide DEVIL 182.8e-0564.29Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C  M KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY

Arabidopsis top hitse value%identityAlignment
AT2G29125.1 ROTUNDIFOLIA like 21.5e-0664.29Show/hide
Query:  MIKERKSRFYIARRCLIMLICWHKYGNS
        + KE+K+RFYI RRC+ ML+CWHK+G+S
Subjt:  MIKERKSRFYIARRCLIMLICWHKYGNS

AT3G46613.1 ROTUNDIFOLIA like 43.4e-0660.71Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C ++ KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY

AT3G55515.1 ROTUNDIFOLIA like 71.3e-0551.61Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKYGNS
        C  ++KE+++RFYI RRC++MLICW  + N+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKYGNS

AT4G35783.1 ROTUNDIFOLIA like 62.8e-1358.06Show/hide
Query:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS
        MGQC S     RK    EE   ES E    GC+ M+KER+SRFYIARRC++ML+CWHKY NS
Subjt:  MGQCQS-----RKGNGTEE--MESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNS

AT5G59510.1 ROTUNDIFOLIA like 52.0e-0664.29Show/hide
Query:  CMEMIKERKSRFYIARRCLIMLICWHKY
        C  M KE KSRFYI +RC++ML+CWHK+
Subjt:  CMEMIKERKSRFYIARRCLIMLICWHKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAGTGTCAATCCAGGAAAGGGAATGGCACAGAAGAGATGGAAAGCTCAGAACCACACAAGTTTGGATGTATGGAGATGATCAAAGAGAGGAAATCCAGATTCTA
TATTGCAAGGAGATGTCTCATCATGCTCATCTGCTGGCATAAATATGGTAACTCACCAACTGTTTTATTAGCTTTCTTTCCCACTTTGTTCTTCTTACTTGAGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAGTGTCAATCCAGGAAAGGGAATGGCACAGAAGAGATGGAAAGCTCAGAACCACACAAGTTTGGATGTATGGAGATGATCAAAGAGAGGAAATCCAGATTCTA
TATTGCAAGGAGATGTCTCATCATGCTCATCTGCTGGCATAAATATGGTAACTCACCAACTGTTTTATTAGCTTTCTTTCCCACTTTGTTCTTCTTACTTGAGTTTTGA
Protein sequenceShow/hide protein sequence
MGQCQSRKGNGTEEMESSEPHKFGCMEMIKERKSRFYIARRCLIMLICWHKYGNSPTVLLAFFPTLFFLLEF