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Tan0006573 (gene) of Snake gourd v1 genome

Gene IDTan0006573
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLow temperature and salt responsive protein family
Genome locationLG09:1719745..1721446
RNA-Seq ExpressionTan0006573
SyntenyTan0006573
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65991.1 hypothetical protein Csa_007015 [Cucumis sativus]2.1e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE T NCIDIL+AILLPPLGVFLKFGCQVEFWICL+LTFFGYIPGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

RZC48826.1 hypothetical protein C5167_017259 [Papaver somniferum]1.2e-2189.47Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADEST+NCIDIL+AI+LPPLGVFLKFGCQ+EFWICL+LTFFGYIPGIIYA+YAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

THU54856.1 hypothetical protein C4D60_Mb11t00470 [Musa balbisiana]2.1e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE TVNCIDIL+AILLPPLGVFLKFGCQVEFWICLLLT FGY+PGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

XP_018676027.1 PREDICTED: hydrophobic protein LTI6B-like [Musa acuminata subsp. malaccensis]2.1e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE TVNCIDIL+AILLPPLGVFLKFGCQVEFWICLLLT FGY+PGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

XP_038879764.1 hydrophobic protein LTI6B-like [Benincasa hispida]1.6e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE+T NCIDIL+AILLPPLGVFLKFGCQVEFWICL+LTFFGYIPGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

TrEMBL top hitse value%identityAlignment
A0A0A0M1D6 Uncharacterized protein1.0e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE T NCIDIL+AILLPPLGVFLKFGCQVEFWICL+LTFFGYIPGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

A0A1S3BNR9 hydrophobic protein LTI6B-like1.3e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE T NCIDIL+AILLPPLGVFLKFGCQVEFWICL+LTFFGYIPGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

A0A4V4H564 Uncharacterized protein1.0e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE TVNCIDIL+AILLPPLGVFLKFGCQVEFWICLLLT FGY+PGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

A0A4Y7IL50 Uncharacterized protein6.0e-2289.47Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADEST+NCIDIL+AI+LPPLGVFLKFGCQ+EFWICL+LTFFGYIPGIIYA+YAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

M0RN96 Uncharacterized protein1.0e-2192.98Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MADE TVNCIDIL+AILLPPLGVFLKFGCQVEFWICLLLT FGY+PGIIYAVYAITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

SwissProt top hitse value%identityAlignment
A2Y075 Hydrophobic protein LTI6B1.2e-1988.46Show/hide
Query:  TVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        T NCIDILIAI+LPPLGVFLKFGC  EFWICLLLTF GYIPGIIYA+YAITK
Subjt:  TVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

Q0DKW8 Hydrophobic protein LTI6B1.2e-1988.46Show/hide
Query:  TVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        T NCIDILIAI+LPPLGVFLKFGC  EFWICLLLTF GYIPGIIYA+YAITK
Subjt:  TVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

Q8H5T6 Hydrophobic protein LTI6A3.5e-1978.95Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        MAD ST  CIDI++AI+LPPLGVF KFGC +EFWICLLLTFFGY+PGIIYAV+ ITK
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

Q9ZNQ7 Hydrophobic protein RCI2A9.5e-1775.47Show/hide
Query:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        ST   +DI+IAILLPPLGVFL+FGC VEFWICL+LT  GYIPGIIYA+Y +TK
Subjt:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

Q9ZNS6 Hydrophobic protein RCI2B9.5e-1771.7Show/hide
Query:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        ST   ++I++AI+LPPLGVFLKFGC+VEFWICL+LT FGY+PGI+YA+Y ITK
Subjt:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family1.5e-1258.33Show/hide
Query:  IDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        +++L AI +PP+GVFL++G  +EFW+CLLLT F +IPG+IYA+Y +TK
Subjt:  IDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

AT2G38905.1 Low temperature and salt responsive protein family1.6e-1471.74Show/hide
Query:  IDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAI
        ++I++AILLPP+GVFL++GC VEFWICLLLT  GYIPGIIYA+Y +
Subjt:  IDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAI

AT3G05880.1 Low temperature and salt responsive protein family6.8e-1875.47Show/hide
Query:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        ST   +DI+IAILLPPLGVFL+FGC VEFWICL+LT  GYIPGIIYA+Y +TK
Subjt:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

AT3G05890.1 Low temperature and salt responsive protein family6.8e-1871.7Show/hide
Query:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK
        ST   ++I++AI+LPPLGVFLKFGC+VEFWICL+LT FGY+PGI+YA+Y ITK
Subjt:  STVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK

AT4G30650.1 Low temperature and salt responsive protein family1.2e-1169.64Show/hide
Query:  MADESTVNCIDILIAILLPPLGVFLKFG-CQVEFWICLLLTFFGYIPGIIYAVYAI
        MA    V C +ILIAILLPPLGV LK G C VEF ICL+LT  GYIPGIIYA+Y I
Subjt:  MADESTVNCIDILIAILLPPLGVFLKFG-CQVEFWICLLLTFFGYIPGIIYAVYAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACGAAAGCACAGTTAACTGCATCGACATCCTCATCGCCATCCTTTTGCCTCCTCTCGGTGTCTTCCTCAAGTTTGGCTGCCAAGTCGAGTTTTGGATCTGTTT
GCTTCTAACTTTCTTCGGATACATTCCGGGGATTATTTATGCTGTTTATGCCATCACCAAGTAA
mRNA sequenceShow/hide mRNA sequence
GTGAGTTGTTAAATTTCTATAAATAGGCTCCACAAGACCGCCACTAGTACTACTACTACTAACTCCTATTCCTCTATTAATTTGTGTTTGTTTTGTTCTCTCTCTCTCTC
TCTTTCTTTCTTAATTATTTAAAAAAAAAACCGGTAACCCACTCAATTATCTTTTTAGTTCTGGTTGTTGTTGCTGTAAAAAAAAAAAAGAAGAAGAAGAAAGCAAAAAT
GGCAGACGAAAGCACAGTTAACTGCATCGACATCCTCATCGCCATCCTTTTGCCTCCTCTCGGTGTCTTCCTCAAGTTTGGCTGCCAAGTCGAGTTTTGGATCTGTTTGC
TTCTAACTTTCTTCGGATACATTCCGGGGATTATTTATGCTGTTTATGCCATCACCAAGTAAAATCCTCCCCCTCCATCTCCCAATCTCCCCACTAAGGGTATGAGATTT
GGGAAGGAAGGGGATGGAAATTGAAGTTGAAATTTCTATTTCTCTTTAGAAGATTTAATGTTCAAACAAAGACCATCATTTCATTTCTTCTTTCTTCTTCATGATTCGAT
CTTCTGTCTTTATGTGTGCGTGTGAGTGTGATCAAAGAAAGAGTCGTACGCCATTTGTGCTTCTTCTCTAAATTAATTTTTTTTTTCTTTTTCTTTTTATTGTAATTTAC
AATTTTTATTTTATATGGAGTTTAATTATTATTGTGTTGCTTTGTATTAATTGATTGGGTTTGCTGTAAAGTAAGGGAAAGGGGTCACGGTGGTTGAATAATAATACTTG
GAATATAATGTGTGAGTGTGCCTTACGTTTCTTTTTTTCTTTCTTTCATTCTCTAACCAAAGTTTCTTCTTTCAAATCCCAAATTTCTATGCACTTATTAAAATAATATG
ATCAATTTTTTAAAAGAAAAACAAAATATATACCTATTTTGTCCTCAATTACATCACTTTTAATTTCTCTCTCTAATTTCATTGAAACTAAATCATCTCAACAAAATGTC
ATTACTGAATATATATATGTGTAATTAGTTTCAATTTTACACTTCATTTTCTTC
Protein sequenceShow/hide protein sequence
MADESTVNCIDILIAILLPPLGVFLKFGCQVEFWICLLLTFFGYIPGIIYAVYAITK