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Tan0006590 (gene) of Snake gourd v1 genome

Gene IDTan0006590
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionActin cytoskeleton-regulatory complex protein
Genome locationLG05:6573946..6574478
RNA-Seq ExpressionTan0006590
SyntenyTan0006590
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1251.02Show/hide
Query:  VVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQQ--AVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        + ++ LLC+IL+ +LLIQ  A+ A    +  +A P        E +N +   +A  PEIRRL KHH   S+AGGGV+IGGL TAVFA VFCYIRVTRK
Subjt:  VVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQQ--AVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

KAG7034949.1 hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-3182Show/hide
Query:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEV--ENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MAVVR GLLC++L GM L QLTAA+ AEAPTV TA PFFG EIGKEV  ENQ  VAAGPEIRRL KHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK
Subjt:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEV--ENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

KGN46704.1 hypothetical protein Csa_020980 [Cucumis sativus]1.2e-2772.82Show/hide
Query:  AVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQ-QAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPK
        AVVRL L+ +IL+GM  IQLTAAN  EAP V TA  FFGS+IGKE   Q   VA GP IRRL KHHFHTS+AGG VLIG LATAVFA+VFCYIRVTRKP 
Subjt:  AVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQ-QAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPK

Query:  HVN
        HVN
Subjt:  HVN

XP_022947872.1 uncharacterized protein LOC111451632 [Cucurbita moschata]1.1e-3182Show/hide
Query:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEV--ENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MAVVR GLLC++L GM L QLTAA+ AEAPTV TA PFFG EIGKEV  ENQ  VAAGPEIRRL KHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK
Subjt:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEV--ENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

XP_023532519.1 uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo]6.7e-3479.81Show/hide
Query:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIG--KEVENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MAVVR GLLC++L GM L QLTAA+ AEAPTV TA PFFG+EIG   E+ENQQ VAAGPEIRRL KHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK
Subjt:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIG--KEVENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

Query:  PKHV
        P  V
Subjt:  PKHV

TrEMBL top hitse value%identityAlignment
A0A067KB75 Uncharacterized protein2.3e-1149.49Show/hide
Query:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQQAVAAGPEIRRLKKHH-FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MA +RL + C+IL+G+L++Q TA  + +        P   S   +E E        PEIRRL KHH    S+AGGGV+IGGL TA+FA VFCYIRVTRK
Subjt:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQQAVAAGPEIRRLKKHH-FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

A0A0A0K3N0 Uncharacterized protein2.3e-1151.65Show/hide
Query:  LLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        L C+I+  + LIQ    + A    +  +     SE G    ++  VA  PEIRRL KHH   SMAGGGV+IGGL TAVFA VFCYIRVTRK
Subjt:  LLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

A0A0A0KCY0 Uncharacterized protein5.9e-2872.82Show/hide
Query:  AVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQ-QAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPK
        AVVRL L+ +IL+GM  IQLTAAN  EAP V TA  FFGS+IGKE   Q   VA GP IRRL KHHFHTS+AGG VLIG LATAVFA+VFCYIRVTRKP 
Subjt:  AVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQ-QAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPK

Query:  HVN
        HVN
Subjt:  HVN

A0A6J1G7L7 uncharacterized protein LOC1114516325.2e-3282Show/hide
Query:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEV--ENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MAVVR GLLC++L GM L QLTAA+ AEAPTV TA PFFG EIGKEV  ENQ  VAAGPEIRRL KHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK
Subjt:  MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEV--ENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

W9R8T9 Uncharacterized protein1.0e-1148.21Show/hide
Query:  VVRLGLLCMILSGMLLIQLTAA----NAAEAPTVGTAT-----PFFGSE---IGKEVENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVF
        + R+ LL +IL G+L+IQ  AA    N A+    G  +     P   +E    GKE  + +  A  P IRRL KHH   SMAGGGV+IGGL TA+FA VF
Subjt:  VVRLGLLCMILSGMLLIQLTAA----NAAEAPTVGTAT-----PFFGSE---IGKEVENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVF

Query:  CYIRVTRKPKHV
        CYIRVTRK   V
Subjt:  CYIRVTRKPKHV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein1.3e-0640.82Show/hide
Query:  LLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSE--IGKEVENQQAVAAGPEIRRLKKHHFHT---SMAGGGVLIGGLATAVFAVVFCYIRVTRKPK
        +LC +L+  +     A++ AE P    AT   G     G+E E  +       +RR   HH  T   S+AGGGV++GGLAT    VVFCYIR TRK K
Subjt:  LLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSE--IGKEVENQQAVAAGPEIRRLKKHHFHT---SMAGGGVLIGGLATAVFAVVFCYIRVTRKPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGGTTCGACTTGGTTTGCTTTGTATGATTCTTTCTGGGATGTTGTTGATTCAACTCACGGCTGCGAACGCCGCCGAGGCACCCACAGTTGGCACTGCGACGCC
CTTTTTTGGCTCTGAAATCGGAAAGGAAGTGGAGAATCAGCAAGCAGTGGCTGCAGGTCCTGAAATCCGACGGCTAAAAAAGCATCATTTTCACACCTCCATGGCCGGCG
GCGGGGTGCTGATCGGCGGCCTTGCTACTGCTGTTTTTGCTGTTGTGTTTTGTTACATCAGGGTCACTAGAAAACCAAAACATGTCAACTAA
mRNA sequenceShow/hide mRNA sequence
CTTTTTTCCATTTTTTTTAAAAAAGTTTCAGATTCAGATTCAGATTCATTCAGTGGCGTTTCCTTTTCTTTATAAAGCTCCACAAATTCAACATATATTATGGCTGTGGT
TCGACTTGGTTTGCTTTGTATGATTCTTTCTGGGATGTTGTTGATTCAACTCACGGCTGCGAACGCCGCCGAGGCACCCACAGTTGGCACTGCGACGCCCTTTTTTGGCT
CTGAAATCGGAAAGGAAGTGGAGAATCAGCAAGCAGTGGCTGCAGGTCCTGAAATCCGACGGCTAAAAAAGCATCATTTTCACACCTCCATGGCCGGCGGCGGGGTGCTG
ATCGGCGGCCTTGCTACTGCTGTTTTTGCTGTTGTGTTTTGTTACATCAGGGTCACTAGAAAACCAAAACATGTCAACTAATTAACCTTTTCTTCTTTTCTCTCTCTCTT
TTTTGAACTTTATGTACTCTTTTTTCCCCCTTCTTTGGAATCGATTCCTAGTTGTAAAAGCGTAAATAATTGAACAGGTTGATTACTTTTGTG
Protein sequenceShow/hide protein sequence
MAVVRLGLLCMILSGMLLIQLTAANAAEAPTVGTATPFFGSEIGKEVENQQAVAAGPEIRRLKKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKPKHVN