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Tan0006597 (gene) of Snake gourd v1 genome

Gene IDTan0006597
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
Genome locationLG02:46524982..46525773
RNA-Seq ExpressionTan0006597
SyntenyTan0006597
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571728.1 hypothetical protein SDJN03_28456, partial [Cucurbita argyrosperma subsp. sororia]8.7e-4482.54Show/hide
Query:  MAKSVSTNKNRRFQTSFFSDSEIDVAIQLIHLSEDSDYHDDLTASSTSCSDDKSPASAASVTNAAGMEDDGSH-TSRRGATAAPTTNLIEDIFEDIGDSA
        MAKS+S+ KNRRF+TS FSDSEIDVAIQL+HLSEDSDY  +  ASSTSCSDDKS ASA S TNAAGMEDDGSH +SRRGAT  PTT+LIEDIFE+IGDS+
Subjt:  MAKSVSTNKNRRFQTSFFSDSEIDVAIQLIHLSEDSDYHDDLTASSTSCSDDKSPASAASVTNAAGMEDDGSH-TSRRGATAAPTTNLIEDIFEDIGDSA

Query:  NRRRRKRRSRSVYEIYKLTKPVISVK
        NRRRRKRRSRSVYEIYKLTKP ISVK
Subjt:  NRRRRKRRSRSVYEIYKLTKPVISVK

KAG6588821.1 hypothetical protein SDJN03_17386, partial [Cucurbita argyrosperma subsp. sororia]4.2e-3876.8Show/hide
Query:  MAKSVSTNKNRRFQTSFFSDSEIDVAIQLIHLSEDSDYHDDLTASSTSCSDDKSPASAASVTNAAGMEDDGSHTSRRGATAAPTTNLIEDIFEDIGDSAN
        MA+SVST++NRRFQTS FSDSEIDVAIQLIHLSEDSDYHD+L ASSTSCSDDKS ASA++ +NA  MEDDG +  RRG    P    IEDI+E+IGD AN
Subjt:  MAKSVSTNKNRRFQTSFFSDSEIDVAIQLIHLSEDSDYHDDLTASSTSCSDDKSPASAASVTNAAGMEDDGSHTSRRGATAAPTTNLIEDIFEDIGDSAN

Query:  RRRRKRRSRSVYEIYKLTKPVISVK
        RRRRKRRSRSVYEIYKLTKPVI VK
Subjt:  RRRRKRRSRSVYEIYKLTKPVISVK

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAATCCGTTTCCACCAACAAAAATCGAAGATTCCAGACCTCCTTCTTCTCCGATTCTGAAATTGACGTCGCAATACAGCTTATTCATCTCAGCGAAGACTCCGA
TTACCACGACGACCTCACCGCCTCCTCTACCAGTTGTAGCGACGATAAATCCCCCGCCTCCGCCGCTAGCGTCACCAACGCCGCCGGAATGGAAGACGACGGAAGCCACA
CCAGCCGCCGCGGAGCCACGGCGGCGCCTACAACCAATCTGATAGAAGACATCTTCGAAGACATCGGAGACAGCGCGAATCGGAGGCGGAGGAAGCGGCGGTCGCGTTCG
GTTTACGAGATTTACAAATTGACGAAGCCAGTAATCTCCGTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CCGTCTATTACTTACCCTTCGTCTCGCTTTCAACGGACGTGCTCGCTAATGGCGAAATCCGTTTCCACCAACAAAAATCGAAGATTCCAGACCTCCTTCTTCTCCGATTC
TGAAATTGACGTCGCAATACAGCTTATTCATCTCAGCGAAGACTCCGATTACCACGACGACCTCACCGCCTCCTCTACCAGTTGTAGCGACGATAAATCCCCCGCCTCCG
CCGCTAGCGTCACCAACGCCGCCGGAATGGAAGACGACGGAAGCCACACCAGCCGCCGCGGAGCCACGGCGGCGCCTACAACCAATCTGATAGAAGACATCTTCGAAGAC
ATCGGAGACAGCGCGAATCGGAGGCGGAGGAAGCGGCGGTCGCGTTCGGTTTACGAGATTTACAAATTGACGAAGCCAGTAATCTCCGTGAAGTAAATGGAGGAGGAATC
GCGAAACGGAAATCGAATATGTATACTCTTCACTCCCTCAACTTTTTGATCGCTAATTTTCCTGAATCGAAATCTAACTGCCTGTGTGTGTGTGTGTGTTTGTGCATATA
TGTGTATGTAAAGTTATAAATCGTTTTTAGCGTTTTTTGCCTTTTTTGCGTGCAATTTAACGGATGTTCTTGCTTATCGTCTGCTCTATTTTGCTTTTCTATGTGGAGAA
TAATAGTGTGTAAACATTGCTTTGGTGTATTTCGAAGTGTTTTTTGATCTCTTCTACTACAAGTATTTCTTAAGAAGAAAGGAAGAATTAGTTGTTAGTTCTTGAACAAG
GAGGTTAAATAAAGATGACTAC
Protein sequenceShow/hide protein sequence
MAKSVSTNKNRRFQTSFFSDSEIDVAIQLIHLSEDSDYHDDLTASSTSCSDDKSPASAASVTNAAGMEDDGSHTSRRGATAAPTTNLIEDIFEDIGDSANRRRRKRRSRS
VYEIYKLTKPVISVK