; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Tan0006620 (gene) of Snake gourd v1 genome

Gene IDTan0006620
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1
Genome locationLG07:65034883..65037917
RNA-Seq ExpressionTan0006620
SyntenyTan0006620
Gene Ontology termsGO:0006378 - mRNA polyadenylation (biological process)
GO:0010468 - regulation of gene expression (biological process)
GO:0048576 - positive regulation of short-day photoperiodism, flowering (biological process)
GO:0048578 - positive regulation of long-day photoperiodism, flowering (biological process)
GO:0005654 - nucleoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003730 - mRNA 3'-UTR binding (molecular function)
GO:0097157 - pre-mRNA intronic binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581052.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]7.4e-19592.31Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSK NDA+TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGG Y GYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGAGSAPSGRYHPYGR
        AGFSRGYD+RGGYGGPDESYG AYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGAGSAPSGRYHPYGR

KAG7017783.1 Nuclear pore complex protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-19492.05Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSK NDA+TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGG Y GYGGNDFSGYGMYGTGGIGAYREDPSMGY+ARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGAGSAPSGRYHPYGR
        AGFSRGYD+RGGYGGPDESYG AYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR        GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--------GGGGGGYDGAGSAPSGRYHPYGR

XP_022934343.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita moschata]9.6e-19592.07Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSK NDA+TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGG Y GYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGAGSAPSGRYHPYGR
        AGFSRGYD+RGGYGGPDESYG AYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR         GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGAGSAPSGRYHPYGR

XP_022982535.1 heterogeneous nuclear ribonucleoprotein 1 [Cucurbita maxima]1.3e-19492.29Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSK NDA+TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGG Y GYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGAGSAPSGRYHPYGR
        AGFSRGYD+RGGYGGPDESYG AYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR       GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGAGSAPSGRYHPYGR

XP_023528997.1 LOW QUALITY PROTEIN: nuclear pore complex protein GP210 [Cucurbita pepo subsp. pepo]5.6e-19592.54Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSK NDA+TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGG Y GYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGAGSAPSGRYHPYGR
        AGFSRGYD+RGGYGGPDESYG AYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR       GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGAGSAPSGRYHPYGR

TrEMBL top hitse value%identityAlignment
A0A0A0LG75 Uncharacterized protein6.7e-19492.45Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSKPND +TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPPAPSKR+HDSRPSYSG YGDAYGEFGGGGYGG FRAGGPYGARGG Y GYGGNDFSGYGMYGTGG+GAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--GGGGGGYDGAGSAPSGRYHPYGR
        A FSRGYD+RGGYGGPDESYG AYNSGGAP+TGGYAGSYDMG+GTGY AGGRGSFYGSR  GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR--GGGGGGYDGAGSAPSGRYHPYGR

A0A1S4E4Y8 heterogeneous nuclear ribonucleoprotein 17.0e-19192.43Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSKPND +TNGEHDD KPLNHKDD +RH+PP HGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSG Y GDAYGEFGGGGYGG FRAGGPYGARGG Y GYGGNDFSGYGMYGTGG+GAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY

Query:  GAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYGR
        GA FSRGYD+RGGYGGPDESYG AYNSGGAPNTGGYA SYDMG+GTGY AGGRGSFYGSR GGGGGYDGAGSAPSGRYHPYGR
Subjt:  GAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYGR

A0A5D3D587 Heterogeneous nuclear ribonucleoprotein 17.0e-19192.43Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSKPND +TNGEHDD KPLNHKDD +RH+PP HGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYG VKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLE+
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY
        AGSQVEIKKAEPKKANPPPAPSKRYH+SRPSYSG Y GDAYGEFGGGGYGG FRAGGPYGARGG Y GYGGNDFSGYGMYGTGG+GAYREDPSMGYSARY
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGY-GDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARY

Query:  GAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYGR
        GA FSRGYD+RGGYGGPDESYG AYNSGGAPNTGGYA SYDMG+GTGY AGGRGSFYGSR GGGGGYDGAGSAPSGRYHPYGR
Subjt:  GAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYGR

A0A6J1F7E2 heterogeneous nuclear ribonucleoprotein 14.7e-19592.07Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSK NDA+TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKKANPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGG Y GYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGAGSAPSGRYHPYGR
        AGFSRGYD+RGGYGGPDESYG AYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR         GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR---------GGGGGGYDGAGSAPSGRYHPYGR

A0A6J1J2Y6 heterogeneous nuclear ribonucleoprotein 16.1e-19592.29Show/hide
Query:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV
        MS+NSMDSK NDA+TNGEH+D KPLNHKDD +RH+PPSHGD ASAGKIFVGGLPRETTSAQFVKHFG YGEITDSVIMKDRKTGHPRGFGFVTYAD SVV
Subjt:  MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVV

Query:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
        DKVIEDTH+INGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEF+DFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL
Subjt:  DKVIEDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEL

Query:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
        AGSQVEIKKAEPKK+NPPP PSKRYHDSRPSYSG YGDAYGEFGGGGYGGGFRAGGPYGARGG Y GYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG
Subjt:  AGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYG

Query:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGAGSAPSGRYHPYGR
        AGFSRGYD+RGGYGGPDESYG AYNS  APNTGGYAGSYDMGIGTGYP+GGRGSFYGSR       GGGGGGYDGAGSAPSGRYHPYGR
Subjt:  AGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSR-------GGGGGGYDGAGSAPSGRYHPYGR

SwissProt top hitse value%identityAlignment
P21522 Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog1.3e-3237.07Show/hide
Query:  HGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYA-DHSVVDKVIEDTHVINGKQVEIKRTIPKGSSSSRD--FKTKK
        HG+     K+F+GGL   TT     +HF Q+GEI D V+MKD KT   RGFGF+TY+  H V D      H ++G+ VE KR +P+      +     KK
Subjt:  HGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYA-DHSVVDKVIEDTHVINGKQVEIKRTIPKGSSSSRD--FKTKK

Query:  IFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGG
        +FVGGI   ++E++ +D+F QYG V    I+ D  T + RGF F+ F+    VD +  + N  ++ G  +++KKA PK      AP  R    R    GG
Subjt:  IFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGG

Query:  YGDAYGEFGGGGYGGGFRAGGPYGARGGS----YSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPN
         G  +G  GG G  GG   GG  G  GG+        GG D  G G  G GG   +     MG   RYG G  R     GG+          YNSG  P 
Subjt:  YGDAYGEFGGGGYGGGFRAGGPYGARGGS----YSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPN

Query:  TGGYAGSYDMGIGTGYPAGGRG---------SFYGSRGGGGGGYDGAG
        + G+ G Y    G G   G  G         S  GSRGGGGGGY   G
Subjt:  TGGYAGSYDMGIGTGYPAGGRG---------SFYGSRGGGGGGYDGAG

P51991 Heterogeneous nuclear ribonucleoprotein A32.4e-3137.87Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EDTHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EDTHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF
          +E   +D+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R   SG +    G F
Subjt:  SVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF

Query:  GGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGI
        GGG  GG F  GG +G RGG Y G GG     YG    GG G Y  +   G    YG G   GY  RGGYGG    YG   N GG    G   G YD   
Subjt:  GGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGI

Query:  GTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG
          GY  G  G+F G   GGGG Y+  G+    +   YG
Subjt:  GTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG

Q6URK4 Heterogeneous nuclear ribonucleoprotein A36.4e-3238.17Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EDTHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EDTHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF
          +E   +D+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R   SG +    G F
Subjt:  SVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF

Query:  GGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGI
        GGG  GG F  GG +G RGG Y G GG     YG    GG G Y  +   G    YG G   GY  RGGYGG    YG   N GG    GG  G YD   
Subjt:  GGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGI

Query:  GTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG
          GY  G  G+F G   GGGG Y+  G+    +   YG
Subjt:  GTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG

Q8BG05 Heterogeneous nuclear ribonucleoprotein A36.4e-3238.17Show/hide
Query:  KIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EDTHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT
        K+F+GGL  ETT     +HF ++G +TD V+M+D +T   RGFGFVTY+    VD  +    H ++G+ VE KR + +  S         KKIFVGGI  
Subjt:  KIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI-EDTHVINGKQVEIKRTIPKGSS--SSRDFKTKKIFVGGIPT

Query:  SVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF
          +E   +D+F +YG+++  ++M D  + + RGF F+TF+    VD ++       + G   E+KKA  K+     A S+R    R   SG +    G F
Subjt:  SVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEF

Query:  GGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGI
        GGG  GG F  GG +G RGG Y G GG     YG    GG G Y  +   G    YG G   GY  RGGYGG    YG   N GG    GG  G YD   
Subjt:  GGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTGGYAGSYDMGI

Query:  GTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG
          GY  G  G+F G   GGGG Y+  G+    +   YG
Subjt:  GTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG

Q8W034 Heterogeneous nuclear ribonucleoprotein 13.1e-3936.25Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF  YGE++ +++M+D+ TG PRGFGFV ++D SV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EF+ +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +L+G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD
           + Y  +  SY G             G+    +G  GYG G+   G  GA  G+Y GY G+   GYG   T G GA    P  GY +  G      +D
Subjt:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD

Query:  --YRGGYGGPDESYGAAYNSGGAPNT-----------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG
             GYG P    GAA++  G P                   GGY+GS D G G         G P+GG  +  GS G  GGGY G GS  S     YG
Subjt:  --YRGGYGGPDESYGAAYNSGGAPNT-----------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG

Arabidopsis top hitse value%identityAlignment
AT1G17640.1 RNA-binding (RRM/RBD/RNP motifs) family protein9.4e-5541.5Show/hide
Query:  SHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPKGSSSS---RDFKTK
        S    +S GK+FVGG+  ETT+  F  +FG++GE+ DSVIM DR TG+PRGFGFVT+AD +V +KV+E+ HVI+ ++V++KRT+P+G   +      KT+
Subjt:  SHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPKGSSSS---RDFKTK

Query:  KIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSG
        KIFVGG+P  ++EDE K++F  YG++ EHQIM DH T RSRGFGF+TF+TE +VD L ++G   EL   QVEIK+AEPK+                    
Subjt:  KIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSRPSYSG

Query:  GYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMY-GTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTG
        G  +++  +G         A G Y  +  SYSG    D+S Y  Y G GG GAY  +  +  +  YG G   GY Y  GYGG  + +   Y +GG  + G
Subjt:  GYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMY-GTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAPNTG

Query:  GYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPY
             Y +     Y  GG+    G+ G   G  +G   +   RYHPY
Subjt:  GYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPY

AT3G13224.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.4e-6666.11Show/hide
Query:  TRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPKGS--SSSR
        +R++    GD AS GKIF+GGL ++TT+  F KHFG+YGEITDSVIM+DR TG PRGFGF+T+AD SVVDKVIEDTHVINGKQVEIKRTIPKG+  + S+
Subjt:  TRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK
        D KTKKIFVGGIP++V EDE KDFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +++A +QV + K
Subjt:  DFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKK

AT3G13224.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.2e-8154.5Show/hide
Query:  TRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPKGS--SSSR
        +R++    GD AS GKIF+GGL ++TT+  F KHFG+YGEITDSVIM+DR TG PRGFGF+T+AD SVVDKVIEDTHVINGKQVEIKRTIPKG+  + S+
Subjt:  TRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPKGS--SSSR

Query:  DFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSR
        D KTKKIFVGGIP++V EDE KDFF +YG V EHQ++RDH T+RSRGFGF+ F++E+ VD+LL+ GN +++A +QVEIKKAEPKK+     PS   H   
Subjt:  DFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPAPSKRYHDSR

Query:  PSYSGGYGDAYGEFGG--GGYG---GGFRA-GGPYGARGGSYSGYG----GNDF-SGYGMYGTGGIGAYREDPSMGYSAR---YGAGFSRGYDYRGGYGG
         S +  Y    G +GG  GGYG   G  R+ GGP     G Y GYG    G +F  GY  YG G +G YR +P +GYS+R   YG+GF        GYG 
Subjt:  PSYSGGYGDAYGEFGG--GGYG---GGFRA-GGPYGARGGSYSGYG----GNDF-SGYGMYGTGGIGAYREDPSMGYSAR---YGAGFSRGYDYRGGYGG

Query:  PDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYGR
          E     Y  GG    GGY G    G G  Y +GG G   GS  G GG Y G G + S RYHPY R
Subjt:  PDESYGAAYNSGGAPNTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYGR

AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.2e-4036.25Show/hide
Query:  GKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPK--------------GSSSSRDF
        GK+FVGG+  ET   +  +HF  YGE++ +++M+D+ TG PRGFGFV ++D SV+D+V+++ H I+ ++V++KR + +                SS  D 
Subjt:  GKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVINGKQVEIKRTIPK--------------GSSSSRDF

Query:  --KTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANP----------PP
          KTKKIFVGG+P ++ ++EF+ +F  YG V +  IM D +T+R RGFGF++F++E AVD +L +    +L+G QVE+K+A PK ANP            
Subjt:  --KTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANP----------PP

Query:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD
           + Y  +  SY G             G+    +G  GYG G+   G  GA  G+Y GY G+   GYG   T G GA    P  GY +  G      +D
Subjt:  APSKRYHDSRPSYSG-----------GYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYD

Query:  --YRGGYGGPDESYGAAYNSGGAPNT-----------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG
             GYG P    GAA++  G P                   GGY+GS D G G         G P+GG  +  GS G  GGGY G GS  S     YG
Subjt:  --YRGGYGGPDESYGAAYNSGGAPNT-----------------GGYAGSYDMGIGT--------GYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYG

AT5G40490.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.2e-11159.2Show/hide
Query:  MDSKPNDASTNGEHDDPKPLNH-KDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI
        MD    +     E  DPKP    +DD  + +P S G   SAGKIFVGGL RETTSA+F+KHFG+YGEITDSVIMKDRKTG PRGFGFVTYAD SVVDKVI
Subjt:  MDSKPNDASTNGEHDDPKPLNH-KDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVI

Query:  EDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQ
        +D H+I GKQVEIKRTIP+GS SS DFKTKKIFVGGIP+SVD+DEFK+FFMQ+GE+KEHQIMRDHST RSRGFGF+T+E+E  VD LLA GNR+EL+G+Q
Subjt:  EDTHVINGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQ

Query:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGY---GGGFRAGGPY-GARGGSYSGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY
        VEIKKAEPKK N    PSKR+ DSR ++ GGYGD YG   GGGY   GG +++GG Y G R G Y GYGG +F GYG  G  GG+G YR +P++GYS RY
Subjt:  VEIKKAEPKKANPPPAPSKRYHDSRPSYSGGYGDAYGEFGGGGY---GGGFRAGGPY-GARGGSYSGYGGNDFSGYGMYG-TGGIGAYREDPSMGYSARY

Query:  ---GAGFSRG----------------------YDYRGGYGGPDESYGAAYNSG---------GAPNTGGY--AGSYDM-GIG----TGYPAGGRGSFYGS
           G G++RG                       +  GGYGGP  SYG  Y S          G    GGY   G YDM G+G     GY AGG G+  GS
Subjt:  ---GAGFSRG----------------------YDYRGGYGGPDESYGAAYNSG---------GAPNTGGY--AGSYDM-GIG----TGYPAGGRGSFYGS

Query:  RGGGGGGYDGAGSAPSGRYHPYGR
          GGGGG  G G   SGRYHPYGR
Subjt:  RGGGGGGYDGAGSAPSGRYHPYGR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGATAACTCCATGGATTCCAAGCCCAATGATGCTTCCACTAATGGTGAACACGACGACCCCAAACCCTTGAACCATAAGGATGATTCCACTCGACATGAACCTCC
CTCTCATGGCGACACTGCCAGTGCTGGGAAAATCTTTGTGGGAGGTTTACCTCGGGAAACAACTTCCGCACAATTTGTTAAGCATTTTGGTCAATATGGAGAAATTACGG
ACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTCGGGTTTGTGACTTATGCTGATCACTCTGTGGTAGATAAAGTCATTGAGGACACACATGTTATT
AATGGGAAACAAGTGGAAATCAAGCGAACAATACCTAAAGGATCTTCCAGCTCTAGAGATTTCAAGACTAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGA
AGATGAGTTCAAGGATTTTTTTATGCAATATGGTGAGGTTAAGGAACACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGA
CAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAGTTGGCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAACCCACCTCCAGCC
CCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTATGGGGATGCATATGGGGAGTTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACC
GTATGGTGCTAGAGGTGGTAGCTATAGTGGATATGGTGGAAACGATTTTAGTGGCTATGGAATGTATGGTACTGGTGGCATTGGAGCTTACAGGGAAGACCCCTCTATGG
GATATTCTGCTCGTTATGGAGCAGGCTTCAGCAGAGGTTATGATTATAGAGGTGGTTATGGTGGACCTGATGAGAGTTATGGTGCAGCATATAACAGCGGTGGTGCTCCC
AATACTGGTGGGTATGCAGGTAGCTATGATATGGGCATTGGCACTGGATACCCTGCTGGTGGTAGAGGCTCTTTCTATGGAAGTAGAGGAGGAGGAGGAGGAGGATATGA
TGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGATAG
mRNA sequenceShow/hide mRNA sequence
TGTTGAGGATGTGGCCAATTGCGAATTCTAGGGTTTAAGGACGCCATTTTTCCGTGCTCAGCGCTGCGAAACCAACAAACTTCACACACATGTCCTCTAGGGCTTAGCCA
TTACCCTTTTCCCTCGTTCACTTGTCTTTACAACCCCTCTCTTCAAGCTTCTTTGTTCCTTTAATGTCGGATAACTCCATGGATTCCAAGCCCAATGATGCTTCCACTAA
TGGTGAACACGACGACCCCAAACCCTTGAACCATAAGGATGATTCCACTCGACATGAACCTCCCTCTCATGGCGACACTGCCAGTGCTGGGAAAATCTTTGTGGGAGGTT
TACCTCGGGAAACAACTTCCGCACAATTTGTTAAGCATTTTGGTCAATATGGAGAAATTACGGACTCTGTTATAATGAAGGACCGGAAGACTGGACATCCCCGCGGATTC
GGGTTTGTGACTTATGCTGATCACTCTGTGGTAGATAAAGTCATTGAGGACACACATGTTATTAATGGGAAACAAGTGGAAATCAAGCGAACAATACCTAAAGGATCTTC
CAGCTCTAGAGATTTCAAGACTAAGAAGATTTTTGTTGGTGGAATTCCTACATCTGTAGATGAAGATGAGTTCAAGGATTTTTTTATGCAATATGGTGAGGTTAAGGAAC
ACCAGATTATGCGTGACCACTCCACTAGTCGGTCTCGTGGGTTTGGTTTTATTACATTTGAGACAGAGCAAGCAGTTGATGATCTCTTGGCAAATGGAAACAGGCTTGAG
TTGGCAGGCAGTCAGGTGGAGATCAAGAAGGCAGAGCCGAAAAAGGCAAACCCACCTCCAGCCCCTTCAAAGAGATACCATGATTCAAGGCCAAGTTACAGTGGTGGCTA
TGGGGATGCATATGGGGAGTTTGGAGGTGGCGGGTATGGTGGTGGTTTTAGGGCAGGTGGACCGTATGGTGCTAGAGGTGGTAGCTATAGTGGATATGGTGGAAACGATT
TTAGTGGCTATGGAATGTATGGTACTGGTGGCATTGGAGCTTACAGGGAAGACCCCTCTATGGGATATTCTGCTCGTTATGGAGCAGGCTTCAGCAGAGGTTATGATTAT
AGAGGTGGTTATGGTGGACCTGATGAGAGTTATGGTGCAGCATATAACAGCGGTGGTGCTCCCAATACTGGTGGGTATGCAGGTAGCTATGATATGGGCATTGGCACTGG
ATACCCTGCTGGTGGTAGAGGCTCTTTCTATGGAAGTAGAGGAGGAGGAGGAGGAGGATATGATGGTGCAGGGAGTGCTCCAAGTGGTCGATATCATCCTTATGGACGAT
AGTAAGTAGCGGTGGGAGCTTTTGTTAATTGATGTGCTACAAGGACGGCAATGCTGATCAGTTCCCGGTCCTCAAAATAATGATAAATATGTGTGCCTCTTACCGTCACA
AGATTCCTCCCATGTTCACCAGGATCACAATTTTCAGAGATTTAGAATTTGACTGTACAATTGATTGACTAACTTGCTGGAGATTGTGCTAAGATTATGTATCACCTATA
TACGCCATTAATTTTTCCATTTTGCTATCAACGTTTACGTTGTTTTATTGACATGGCTATTTTAAAGAATGTTTAATGAATTGGAATATTTCGGTTTCGTTCTA
Protein sequenceShow/hide protein sequence
MSDNSMDSKPNDASTNGEHDDPKPLNHKDDSTRHEPPSHGDTASAGKIFVGGLPRETTSAQFVKHFGQYGEITDSVIMKDRKTGHPRGFGFVTYADHSVVDKVIEDTHVI
NGKQVEIKRTIPKGSSSSRDFKTKKIFVGGIPTSVDEDEFKDFFMQYGEVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLELAGSQVEIKKAEPKKANPPPA
PSKRYHDSRPSYSGGYGDAYGEFGGGGYGGGFRAGGPYGARGGSYSGYGGNDFSGYGMYGTGGIGAYREDPSMGYSARYGAGFSRGYDYRGGYGGPDESYGAAYNSGGAP
NTGGYAGSYDMGIGTGYPAGGRGSFYGSRGGGGGGYDGAGSAPSGRYHPYGR